Array 1 114254-117576 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB889990.1 Teredinibacter turnerae T0609 B013DRAFT_scaffold00016.16, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 114254 29 100.0 32 ............................. ACTGCCGCGCGCTGCGGTATGAGCAGACAGTG 114315 29 100.0 32 ............................. AAATAGATCGGCTCAAATTAACCACTTCTACC 114376 29 100.0 32 ............................. GCGCAGAATATAAAACGCGTATGATAGAAAAA 114437 29 100.0 32 ............................. TATCGAATCCGAATTTCGCAGCTTTGCGAAAA 114498 29 100.0 32 ............................. CAATGGCACGCGGTCGACCAGTTCAAAAACGG 114559 29 100.0 32 ............................. ACTTGCGTCATGGCAACCGGCAGATCGGCGGC 114620 29 100.0 32 ............................. TATGTGTCTGATTTGGTTATGAAAAGCACACA 114681 29 100.0 32 ............................. CGTTTGCAGCTTAACCTCTTTGGCTATTTCCA 114742 29 100.0 32 ............................. CCACAGTAAGATCAAAGCGCGGCAGTTGCGCA 114803 29 100.0 32 ............................. TGATGTGCAAAGTTCGGCCCGACGCAATATCA 114864 29 100.0 32 ............................. GCCGCGCTTGGAATGCGAGACGGCAACGAGGC 114925 29 100.0 32 ............................. GAAGGCACGGCAATACAAAAGGCCGCATTTCT 114986 29 100.0 32 ............................. CCTGGTGAACTTATTCCCGCTGCGCGGGAACA 115047 29 100.0 32 ............................. GAAATATTGTTTTACCAGCACGATCATTTTTT 115108 29 100.0 32 ............................. CCGTGGGAAGTATCCGCACTTACCACTATTGG 115169 29 100.0 32 ............................. CTTGGCGCTATGGGATGCGAGAGCGAAATCGG 115230 29 100.0 32 ............................. AAAATCTTTCCCTATCTGATCTTGTTTCAACT 115291 29 100.0 32 ............................. TGTTTGCCGATTGCCCCGGCCAACAGCCTGCA 115352 29 100.0 32 ............................. TATATCCCGCCGCATCTTTCGACATTTGAGGG 115413 29 100.0 32 ............................. CGACCTGCTTACAGCTTTTTTTATGGGCTAAA 115474 29 100.0 32 ............................. CGTTATGACCGAGACTGACTTAAAGCGCTGAC 115535 29 100.0 32 ............................. CTCGTTGAGTTCTTCAACGTCGCGTCCAACGC 115596 29 100.0 32 ............................. TGAACGCGAATCATCGGTATTATCTTGGCTTT 115657 29 100.0 32 ............................. AGTCCAGCTCGTTTTTACAGGCAATTAACAGC 115718 29 100.0 32 ............................. CCCCTTGCTCACTGGCAATTCGGGTTAAAAAA 115779 29 100.0 32 ............................. CATTTGGATGCGAATAAATGGGCGTGGGAGCA 115840 29 100.0 32 ............................. TTTCTAGTGTCGGGTTTATTGGCTACGATATA 115901 29 100.0 32 ............................. CACCGCAGATGTTGCCGATGTTGGCGAGTTAT 115962 29 100.0 32 ............................. TGATGCGCTCGCATCGTTGTCTGCAATCTATT 116023 29 100.0 32 ............................. GTATTATTTGAAAGACGCCGAGCTCACTATAA 116084 29 100.0 32 ............................. CACCCTGCCCTCTTCGTCGGGCTTTCCGAGCG 116145 29 100.0 32 ............................. TGATACGCGTCTTGCATCAGGCCGCCGAGAAC 116206 29 100.0 32 ............................. GGTTCCTCGTTGGAGCATATCTGAGCCCGAAA 116267 29 100.0 32 ............................. TTACAAATAGCGATAGACGTGATAGAGGATAT 116328 29 100.0 32 ............................. CCTGGTATGCAATGCATGCTATCGATGTTGGC 116389 29 100.0 32 ............................. GTATTTGACTATTGTGTTATTGGCTGCGTAAT 116450 29 100.0 32 ............................. GTCGTTTTCCATGGCATGATTAACGACTTGAT 116511 29 100.0 32 ............................. AAAAACTCGTACCCTTCCGGTCTCCTTTGCCG 116572 29 100.0 32 ............................. TTTGATTACCACCTTTCCGCTGGCATGTACCT 116633 29 100.0 32 ............................. TATTACTTGGATTATCTGTCGTTATACAAAGC 116694 29 100.0 32 ............................. AGCTAGTATCAATTGTTAATGCGATGGAGTCA 116755 29 100.0 32 ............................. ACTCACCAATAAAAAGGGGGGATATCACTTTA 116816 29 100.0 32 ............................. TTTACTGGGTAAACCTTCTGTGATGAATACTA 116877 29 100.0 32 ............................. TCGTGCTTAGTGCGTTGACGAGTCATGCGACC 116938 29 100.0 32 ............................. GTAGACCCCGAAAAGGCGGCTGCCGAGGCACA 116999 29 100.0 32 ............................. CTTCACGCACACAATAAGCCGCGCTTAAAAAA 117060 29 100.0 32 ............................. AATTAGCGTCCGCGAACTTCGGCTACAACGAA 117121 29 100.0 32 ............................. TGCGGCGTTTGTTATTAAAGCTGGCAATTCCA 117182 29 100.0 32 ............................. GTGCCGCTGTCTGAGGGTGGCACTGATGATGA 117243 29 100.0 32 ............................. AAGTGCAGCACTGCGACCCACTATTAACATGG 117304 29 100.0 32 ............................. ATAGTCTAGAGGGTTAAAAGACCGGTCGCTTA 117365 29 100.0 32 ............................. ATCAGCTCATTGCGGCGGCAGATGCGGATGGT 117426 29 100.0 32 ............................. CTTGCAGAACCCCTGCACACAGCCCCCACTAA 117487 29 100.0 32 ............................. GCCGCCGCGCGAAATTATCTGCAAACCTACTA 117548 29 72.4 0 .......T.....C.........TTTTGC | ========== ====== ====== ====== ============================= ================================ ================== 55 29 99.5 32 GCGTTCCCCACGAGCGTGGGGATAAACCG # Left flank : ATTCTCAACCGGCTTATTCCTGCGATTGAAGAGGTTCTTGCCGCTGGGGAAGTTGCACCCCCGCAACCGCCGGACGAATCCGTGCCGCCAGCTATACCACTTCCCCAGAATATTGGTGACGAAGGGCACCGAACCTGATGGCATTTACCGTTGTGGTTACCGAAGCAATCCCGCCCCGGTTACGGGGGCGTCTCGCGGTTTTCATGCTGGAAATTCGTGCAGGTGTATATGTCGCGGATTTATCGCGTCGGGTTCGGGAAAAAATCTGGGAATACCTGGAGGCCGACCTCGAAAACGGCAATGTAGTGATCGCCTGGGCCACTAATACCGAATCCGGATTTGAATTCCAGACCCTCGGTGAAAACCGCCGCGAACCTGTGGATTGGGACGGCCTGCGCTTGGTCTCCTTCCTGCCCAAAGAAAGCGTCGACGATCTTTAAAAATCTGGTAGAAAAATACATCGCTAAAAACACCTTGAGAATCAATGGTGTACACTAAGT # Right flank : CTCGCCTTCCTCGACGCTGAACAATTTGGAGCCTGCTGGTTGGACTCTGCTGTCTATGCCTGCCAGCTTAATGTTCCGGTGTTAGTTACGTATATTTTAGACGCAAGGCCCATACGAGCGCATTTTTCATCTGCTTCAAGAGTAGAGCCTTTTGCCGCATTGTATAAACCCGCACATAGCGGCTCCTTGGCACCAAACGCACTACGTTGGTGTGAACGCATATTCTTTCGCTGTTCGACGTAGGGAGATTCGTGTTAGAGGCTGCTGATTCAATGTCGAAGACTGGTAAAACTTTGGCAATGGTTGGTCATTTGCGGTTGGAGACTAGGAGAAATCGGTCAATGAAGGGTCATTTGCAGCTGGATATTAGGAAAATGCGGCCAAAGGCAGGTCAAGAGCAGTTGGATGCAGGCGAAAAGCGGTCAAAGGTTGGCCATCTGTGGTTGTAGACTGGGAAAACCTCATCAAAGGGCGGTTACTGGAGGTTGGAGATAGGGCAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCCACGAGCGTGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCGTTCCCCACGGGCGTGGGGATGAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 343156-350866 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB889976.1 Teredinibacter turnerae T0609 B013DRAFT_scaffold00002.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 343156 28 100.0 33 ............................ CCAAAAATCAGTGTCTTTATAACTTATTGATAA 343217 28 100.0 32 ............................ CGATAGCGCAAACAGCTACCAGCAAACGCCAA 343277 28 100.0 32 ............................ GCGAACATTTCCACTGTTTCGGCTGCCGAACT 343337 28 100.0 32 ............................ TTGCGTTTGACCGGGCCGCGCTGTTATCACGA 343397 28 100.0 32 ............................ AAGGTACGTCAATTTCTTTGCCGATCCTTTCC 343457 28 100.0 32 ............................ CTATGGATGCACTTTCAAAGGCAAAAATTCCG 343517 28 100.0 32 ............................ TGGCAAACCGCATATTTCGGACATGGGAAGCC 343577 28 100.0 32 ............................ GAAAAAAATTCTAAACACTGGCACAACAGCGA 343637 28 100.0 32 ............................ TACCTTCGCAGCGTTGATGCTTGACAAGTCAT 343697 28 100.0 32 ............................ AATGCCGATTGTGTTTGACCGCCATAATGGCG 343757 28 100.0 32 ............................ TCTCCGTACAGCTCGCCTACGCGGAGCATGCC 343817 28 100.0 32 ............................ ATTGCTGGAGGTGCTTGCTTGGGTTGTTGCTG 343877 28 100.0 32 ............................ GGCCGCAGCTAGCCCGGTACCGATCTGTGGAG 343937 28 100.0 32 ............................ ACTCAGTGGGGCGCTGGTGTCGATGCTGCACT 343997 28 100.0 32 ............................ TACGTATGCTCAAGAGATTTTGAACGCCGGGA 344057 28 100.0 32 ............................ AAAACCCTGAACCAAATGCGGTACCACCATCA 344117 28 100.0 32 ............................ TAATCTGCTCCAGCGAGCGGTATTTGCCGTTA 344177 28 100.0 32 ............................ TCATCATAATTGCAGCTCTCAAGCGTGGGCGG 344237 28 100.0 32 ............................ TCGCAATTCAAGCGCATGTTGATGGAGGAAGC 344297 28 100.0 32 ............................ AATTAAGCTCTGAACCATCGATTCAGTTTCAC 344357 28 100.0 32 ............................ AGAAGGCCCAACAATGCGACCGTCTAACTTCC 344417 28 100.0 32 ............................ TTATCGTGGTACGTCAACTTCAGTATGTAGTG 344477 28 100.0 32 ............................ GGAACGCAACTGGCAGTACTACGAAGTAAACC 344537 28 100.0 32 ............................ GAACTGAAAGAGCGTATCGAAAAGCTTGAGGC 344597 28 100.0 32 ............................ GTACAGCAGGTCGTCCGTTGAATTTAATGGCA 344657 28 100.0 32 ............................ ACACATAAGGCTCTGCTTTAACCCTAATGGAG 344717 28 100.0 32 ............................ AGAACCCAAATGGCTTGCGATCATCATTTAGT 344777 28 100.0 32 ............................ CGGAAGCTGAAACGGAAGAAGAGAAGCAATAC 344837 28 100.0 32 ............................ TGTCCGGCGCTAATTAATTGCCTGAGCCATTC 344897 28 100.0 32 ............................ TGCGCGAGTGCTGAACGTGAACCGCTTGCCGG 344957 28 100.0 32 ............................ TTCGATGTATTTTTGGGTATCCATCACTTAAT 345017 28 100.0 32 ............................ ACAGTGCGGGCACCTCACTTTATCGTCTTGAC 345077 28 100.0 32 ............................ AGCTGGTGAACACTGGCACCGCCTCAATGGAA 345137 28 100.0 32 ............................ ATTGAGTCATGGGAAGTTGTTGAGCTTGATGG 345197 28 100.0 32 ............................ TTGCAGCTTTTCCAACAGCTCGTTTGCCTTGC 345257 28 100.0 32 ............................ AGCCTGACCAGCCCCACCAGGCGCGCCACCCC 345317 28 100.0 32 ............................ ACAGTACCATCAACACGCATTAGCCCTCTAGT 345377 28 100.0 32 ............................ AGCAAGAAAACGAACAGTTGAAGCGCGAAAAT 345437 28 100.0 32 ............................ GCAAAGAAGCTGCCGAGAAAGCCGAGCGTGAA 345497 28 100.0 32 ............................ TGGATTTTTACGAGTTTACAGAGCAGGCTCTG 345557 28 100.0 32 ............................ GTATGCTAAACCGCAAGGTGGTGACGCTGCGG 345617 28 100.0 32 ............................ TGTCTCTCTTTGCTTGGTCTTGGCATTACTTA 345677 28 100.0 32 ............................ GGCCAGATAGCGGCGTCAGAGCTTGGCCCTGG 345737 28 100.0 32 ............................ AGGCGAGACATGAGAGGCATAAGCTCAACATA 345797 28 100.0 32 ............................ TTTGCCCGGATCTTCTTCGGCGTCGGACGACT 345857 28 100.0 32 ............................ TGGAAGCCATTGTCAACGGCGACGACATTACT 345917 28 100.0 32 ............................ GCACCACCAAAACCACCCGTGCAACCGCGAAA 345977 28 100.0 32 ............................ ATGTGATATTTCAACACTGATACAATTTAGCT 346037 28 100.0 32 ............................ ATTTGTTGTGCACGCTGTTTTTCGTTTTGCAG 346097 28 100.0 32 ............................ TTTTGGCGGTGGCGTAACCGTTTCCGGTAAAC 346157 28 100.0 32 ............................ TCTAACGACGCGGAAAATGGTACATCGGCGGA 346217 28 100.0 32 ............................ TGCTTGGCTTTGTGTTTTTCTATGATTTCTGA 346277 28 100.0 32 ............................ TGGCTGAACGCTGGTGACCAGTTGTACAGTCA 346337 28 100.0 32 ............................ ATTCCGCCGTCCTGCCACATCCACCGGCCCCA 346397 28 100.0 32 ............................ ATTTATATATTTATGAGGGGCAGGGGCTCGGG 346457 28 100.0 32 ............................ ATTATCGATTACTTTTCTACCCGCGACGCCCG 346517 28 100.0 32 ............................ ATTGCCATCGCGTATTAACGCGCGAGAAAACA 346577 28 100.0 32 ............................ GCAAAGTAAATTGCTTCGGCACATTCGTATTT 346637 28 100.0 32 ............................ AAAGCCATCGTAATCAATGCGTGGTCGATTGC 346697 28 100.0 32 ............................ TTCCGGCTTATCTGGCAACCAGTCTGGCCATA 346757 28 100.0 32 ............................ ATAACAGTATTAGCTGCATGCACTATTTCAAC 346817 28 100.0 32 ............................ TCCGATTCGAGAAACAGTTCACCTCTATCGTC 346877 28 100.0 32 ............................ CTTACAGCATGGAATTGATTGCAGAAGGGGTG 346937 28 100.0 32 ............................ ATGATGTCTTGGGATATGCGCGTGAGAATTTC 346997 28 100.0 32 ............................ TTTCCGAGATTTGAAGAAATTATGGAAAAATC 347057 28 100.0 32 ............................ ATTCTTTATAGCATCAATTTCTGCATCAATGC 347117 28 100.0 32 ............................ TTGGCCAGCAGCTCGCTGAACGACAAATCGCC 347177 28 100.0 32 ............................ TCCGCCTTTTTTGCGGCCAGCTCGCGCTCAAC 347237 28 100.0 32 ............................ AGTTAACTGTTAAACGGTGCTATGCTCTGCTC 347297 28 100.0 32 ............................ AATCATCCGTCTAACGTGTTTGTGTACTTTAT 347357 28 100.0 32 ............................ AAAAGACAGGGTTAGCGTTTCAAGTGGAACAT 347417 28 100.0 32 ............................ GAGAACAAAATAAACATCCGTGGTGCACAGCG 347477 28 100.0 32 ............................ TTTCCACGATAAGAGCACGCTATTGCGTAGTC 347537 28 100.0 32 ............................ TTGATGGCCTTCGCCTGGGAGTCAACCTGCTT 347597 28 100.0 32 ............................ ATACAATGAGGACACTCCCACTGGGGTACACA 347657 28 100.0 32 ............................ AGAAAAAAGCATCGTTGTGCAGCCGATACGCA 347717 28 100.0 32 ............................ GTTTGCACAACCAAAAATTAAAGTATTTACCT 347777 28 100.0 32 ............................ TCAGCTATGCGGTTTTGTCTGCGCCGCTCTCT 347837 28 100.0 32 ............................ TGCTAAACCTGCCCAGGCCCCGGTCTCAAACG 347897 28 100.0 32 ............................ CAGTTAAATTGCCGAGCACCACACGTTCGTTT 347957 28 100.0 32 ............................ TGTTCATTTAACGTCATTCGCAGCCAGCCCCA 348017 28 100.0 32 ............................ GCTGACATTTTGGCGAAAAAAGGTATCGACCT 348077 28 100.0 32 ............................ TGTCACTGTATTTCACGGCATAGGTAATACTG 348137 28 100.0 32 ............................ AGGTGCGCAGCGAAAAAATGGCACATTAACGT 348197 28 100.0 32 ............................ ATATATCTTACTGTCATGTGTGTCGGCTGGTG 348257 28 100.0 32 ............................ ACAGAGATTATCGTCAGTGGAAACGATTTCGA 348317 28 100.0 32 ............................ TTGCTAATCCCATCAAAATCTATTCCCGTGTT 348377 28 100.0 32 ............................ GATAAGCAGATGGAGCGTGCGCAAGTCGAGGG 348437 28 100.0 32 ............................ TTGTACAAAGAGACCTTGAAGGTATCGGTTAC 348497 28 100.0 32 ............................ TGGATGCATTTACCGCAGAGCAGCTTGTCGGC 348557 28 100.0 32 ............................ CGGTAAATAAAATCATTGCGCAGCAGCCAAGT 348617 28 100.0 32 ............................ TGTGCCATCTCCGATACTGGCCCCTTCCGGAT 348677 28 100.0 32 ............................ GATAAGGGCTAAAGGGCAGTCAGCTAAGTATT 348737 28 100.0 32 ............................ ATGCTGATCCTGCCATTTTTGAGTTTGCAGCG 348797 28 100.0 32 ............................ ATTTTCTAAAATGTCAGCTTTTCAATTTTTTC 348857 28 100.0 32 ............................ GTGTCAAAACCGCTACCGCAAACCTTCAGGTA 348917 28 100.0 32 ............................ TGTTGGAATGCGCGAGTGGTCCACCGTTTCGC 348977 28 100.0 32 ............................ AACCCCGTGGCGCCTTCCTCAAGTTGTACCGA 349037 28 100.0 32 ............................ CACATAAAAGCGCCGGCTGAAGTGCGGCTGGA 349097 28 100.0 32 ............................ TACAACTAATCGTTTTTCATTTGCTTTATGAT 349157 28 100.0 33 ............................ CGCAAGCGTGTTGCAGAAGGTTTTGCCCGCGAT 349218 28 100.0 32 ............................ AAGTATTATTTTGTAAATTTTGTTTAGCTGGT 349278 28 100.0 32 ............................ AACAATCTCGCCACGATCTTTTGCAAATGGCT 349338 28 100.0 32 ............................ ATCGTTGTTCTATACTCCAGAATCAACCGTTC 349398 28 100.0 32 ............................ AGTTGGATTCGGGTGCGCGTGCAAGCCAGCTA 349458 28 100.0 32 ............................ CGGATCAAGTCGGTATCATTCTCAGCAATCAA 349518 28 100.0 32 ............................ ACGATAACCCGTGGTTTCAATACGATGAATCA 349578 28 100.0 32 ............................ TGGGATTGAACGATTGCAGTAGATTGCGCTGC 349638 28 100.0 32 ............................ AGAAGAGATAAAGCCGCAGAAGAGAGGTAAGT 349698 28 100.0 32 ............................ GAGAAATGCGAGTCGCTATTTCTGAGCAGCGC 349758 28 100.0 32 ............................ AGACACCGCCGCTTGCATGATATGGCTTGGTA 349818 28 100.0 32 ............................ ACTACGCCAACGCCATGGACGCAGCAAAGCTT 349878 28 100.0 32 ............................ TGGAGAGTCCAGGTTGATAGCTAAGTATGCGA 349938 28 100.0 32 ............................ CGCAGAATTGTATCAAGAGTTGTGCGATCAAA 349998 28 100.0 32 ............................ GTATGTATCCAGCTTATAACTGGATTCACCTT 350058 28 100.0 32 ............................ CATCGAAATCAAACAGAATAATCACAGGATTA 350118 28 100.0 32 ............................ TTAAGGAAGGCGCGTGTACCGACACACTTCTC 350178 28 100.0 32 ............................ TTTGTGCATAGCGTTGTTTTGCTTCCCGCTAC 350238 28 100.0 32 ............................ TCATCTGCGTTCATTTTTACAAACGTGCGATA 350298 28 100.0 32 ............................ CGAAGCAGAAGAAAGGGTGGAAAAAGCCATGG 350358 28 100.0 32 ............................ TTGCTCAGGAGGAAGAGAACCGCTAGTACATT 350418 28 100.0 32 ............................ TGCGCGAATGGTTTGCTGGGTTGTAGCGTGGG 350478 28 100.0 32 ............................ CACACCGTTAATACGGTTACGGGTTTGCTGCG 350538 28 100.0 32 ............................ AAAATAACGGCGGGCGTGTTTATTTCTTTGTC 350598 28 96.4 32 A........................... TGTTAGCCTGGTGTTGGAGTCGGGTGTATTGC 350658 28 100.0 32 ............................ TGTCAAAGGGGGCGGGCCGGGTGCGATTCGGT 350718 28 100.0 33 ............................ CAAAATTTTTCGTTCATGGTTAGGCCCTTTTAT 350779 28 100.0 32 ............................ AAAACGCGGACCACTCTGCATTAAACGGATAG 350839 28 92.9 0 ......................C....T | ========== ====== ====== ====== ============================ ================================= ================== 129 28 99.9 32 GTTCGCTGCCGCACAGGCAGCTAAGAAA # Left flank : GAGGCATCACTGGAGCTTTTGGATACGCAAAAATGGCGTCAGGGCTTGCAGGACTACACCCTTGCAACGGAATTGCTACCAGTGCCCGCTAACGCTAAATTTCGCACAGTAAAACGGGTGCAAGCGAAAAGCGTTCACAACAAGCGTAAGCGCTCGGTGGCAAAAGGCTGGCTAACGGAAGTGCAAGCACAGGAAAAAATTCCCGATACTCAGTTCAAAGTTCTCAAACTCCCCTATGCCCAACTGAAAAGCCTCTCCAATGGCAATATCATGCGGGTGTACATACAGCACGGTGAACTACAGGAGTGTCCCGCCGAAGGCGAATTTAACAGCTACGGGTTAAGCCCCACAGCGACGATTCCCTGGTTCTAACCCTTTTTTTAGTCCAAATCGTAACTCTTTGATTTATAAAGGGTTACGATTATTGCTAAAAAAAGGGTATTTTCTTCTGAAAATGGAAATGCTCTTTAACAACAAGGATTTAGGTGCTTCTAGCTCTA # Right flank : TTTATCGATTATTGTTTGCAATGAAGGCTCGCTTGGAGTTTTTAACTTGGTGGCCAGGGCTTCCTAAACACAATCTTGGCATTGCTATGTTGTTGACTTTCGACTGTGCGAACTACCTAAGCAACAACCAAAAATCGCTGGGAATAAAATCATTCCCGGCATGTAACTCGAGCCACAGCAGGCCCTCATCTACCAGGCGGGCACGGATATGCTCGCCGTAAAACAAGTTATTACTAAAGCACAGGTCGGAGTAGGGCTTAGCATCCGCTGGCATGCCCGGCTCACGAAATTCGCGCGTACAACTCACGAGCGAGCCTGCTGCAATGGCTTTTTCGCTGCTCTTTACGCAACTCACCGAAACCGTGGCGCCTCCCATATCCATTGTGTACCCAGCGTTAAATACCGTGGTCTGCGCTGCGGGGACAAAAGTAGCGACTGGCGTTATATCGGTACCGGCTAACACCTGCTCCGGCAGGTTTTTAATAGCATCTACAGGTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCACAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCACAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 26321-25001 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB889984.1 Teredinibacter turnerae T0609 B013DRAFT_scaffold00010.10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================== ================== 26320 37 100.0 34 ..................................... AACATACATAATTAATTGCTCAGGGTTTACCGCC 26249 37 100.0 34 ..................................... TGTTGTTGCTACTGCTGTTACCTTTGGCATATTG 26178 37 100.0 34 ..................................... CTGCGAAATGGTATCGCAGTACATCTCTAGCCTG 26107 37 100.0 35 ..................................... TGGCGGTACATTATTTTGCACCGCAAATATATATT 26035 37 100.0 34 ..................................... ATAAAGCTACGGGTCAACCGCAAATTATCATGCT 25964 37 97.3 34 ..............C...................... CAGCCAACAAACTCACCGTTTTCGTTACACAGAG 25893 37 100.0 34 ..................................... TTTTGTTTGCCTGTAAACCGTGTCGAGCTGCGCT 25822 37 100.0 34 ..................................... CGCAACTCTGGCGACCTCGCGGAAAAGGACTACT 25751 37 100.0 34 ..................................... TCGCACTATGTCAGCGCACATTTGCTCGATATCT 25680 37 100.0 35 ..................................... CCATGTAAACCTCGGCGTAGGTGAACGTCTCAACG 25608 37 100.0 35 ..................................... CAAACCTAAGTAAAACCCTTTTGTCCCGTCTAATC 25536 37 91.9 34 .........A....C......T............... AGAATACACATGCTGATCCGCATCATTAATATAG 25465 37 94.6 34 .........A...........T............... TTCTGTGTCAGGGAAAGCTCTTTGTACCTCAGAG 25394 37 94.6 34 .........A...........T............... ATACAGCGCCTTAAACGCTGCGAGTGAGTCCGGT 25323 37 94.6 34 .............TC...................... CCCTTGATGTTGCAGCAGTCATTCCAACGCCAAA 25252 37 94.6 34 .............TC...................... CTGCTGCAGCGTTTCTGCGACAGTGGTTTTTCCC 25181 37 97.3 35 .........A........................... ATCGATAATTTTCAGTGTCGTTTGATAGCTACACG 25109 37 94.6 35 .........A...........T............... GTAGCTGTGAGATACGTAATGCAATATTTTTAAGC 25037 37 97.3 0 ................................A.... | ========== ====== ====== ====== ===================================== =================================== ================== 19 37 97.7 34 GCGTCGCTGGAGGCTTAGCCGCTAAGGCTGTTGAAAC # Left flank : TTGTAGCGCGAATAAAAAGCGGGCCGAAGCGAACTGCGGCACAGGGGGTTTAATACTAAAAATTCAAAACAAGTTAACCTGTAAATTGCGTAAGCCGCTACTATTATAAACCGGTGCACGAGGTTTTAATGTTTGGGGTTTTCACCTCGCAATGGTTGCAGCGCCTTCAGGCAGGTTTTAAAAATCGCAGGCAACAAAAAAGGGTAACAAATCGCAGCTAACAAAGAACGAGCAGCACAAACAGGCGGCTTTTCGCTAACCTCTGGTGCTGTTTGGGGCCTTATAGTGCACAGCGTAAAAAAAGCCCGGTTAAAACAACGGTTTAGCACCGATTAGCGCGCTATTTTTAAGAAGTTGGTTAGCGAGCCGTTAAAAATCAAAGAGTTAGTGTGGATATGGCACAAATTATCGGTATACTCGATACGCGACTATCAGGAAAAAGCGGGGTTAGCGAATATTGCACCTGCAAGCCGCTACCCGCAAGGGCGCCAGCACCCGGC # Right flank : CCGATTCCGACGGCGAATGCCATGATTGATTGACCTTGCGGTTGTGGGGCTGGTAATTTTAGGCCGGTGGCCCGGTGCGGTTGGGGCCCTAAACCCCAAGGATATTTTTCGACATGGAGAGCAGATGCATGCGCGATTCGCTGCTGCCGTTACAGCACTTACTGCCGTTGCGCAGTGTGGTGGTTTGCTTGCAGTGTGTAACCGCGTGCGAGTTAAGTTTTTTCCATCAGCCCGCCATGAGCGCATTCCTGCGCAATTTACTGGATCACCCGGATCAGTTCGATCAGTTCCTGCTTGCCGATACGCCCGAAAGCGGCCGTCTCTTTTATAACGAAGGTGATTTGTACCGATTTACCGTGCTTGCACTGGCCGGTGGCGAGGTGCTGTTGGCGCGCCTACTGGCCCGTTTGCGCAATTTACCTGCGGCGGCAATTGCAGCCCGGTGCAGCGGCGCGTTTGCCGATAATTGGCGTTGCGCGGGCTTTAGTGATGGCTTTAAC # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.86, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTCGCTGGAGGCTTAGCCGCTAAGGCTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.80,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA //