Array 1 474425-470870 **** Predicted by CRISPRDetect 2.4 *** >NC_011661.1 Dictyoglomus turgidum DSM 6724, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 474424 30 80.0 31 AA.....................G.T..TT TTAAGCGGTAGCTTTTTTGCCCTTTTTACGG T [474400] 474362 30 100.0 36 .............................. TTGCACTTGCAAACCTACAAAAGCATCCCATTGAAG 474296 30 100.0 37 .............................. TTCTTATTACTTTTCTTGTAGAAACAGCCAAAATTTC 474229 30 100.0 37 .............................. TTAGATTTTGCGAAATTATATATCGAATTAAAAGAAA 474162 30 100.0 36 .............................. ATGGACGTTATGGAGACAGGCTTGAAGTAAGGTTTC 474096 30 100.0 36 .............................. ATTCATCGTTGTTCATTTTATCTCCTTATATAACAT 474030 30 100.0 38 .............................. AAGCTGAAGGGCAAGGAGTATATTTGATAACATAGAAA 473962 30 100.0 37 .............................. AAGCAACCCTTGAAATAGAAATGCCTTTCTTCTTTGC 473895 30 100.0 36 .............................. ATTTTCTAGTAATTCATGGTTGGATGGTTTATTTAC 473829 30 100.0 37 .............................. TTTCCTGTTTTCAAACTATTGGGGCAGTGGGTATTGA 473762 30 100.0 36 .............................. TAATTTGCCAGATTTGCCCGATGATTTTTAGTTTAA 473696 30 100.0 36 .............................. TTCACCTCCTTTCCTATGAATTTGAGGATGAGTAAA 473630 30 100.0 37 .............................. AGGAGTAGTTTTGGTTCGGTCTGGTTGATAAAAAGTA 473563 30 100.0 38 .............................. AAAGAAGATTTCCCAGATTTTTATGAGGATTTTGGCTA 473495 30 100.0 38 .............................. GAAATAGGAAATATTTTGGTAATCGATAGAGATGAAGT 473427 30 100.0 36 .............................. CCTGGGATATTTCCAAAAAGTTGTGGGGGCTACTTT 473361 30 100.0 37 .............................. AAAAATTTTTTCAGGTTCGTTGATATTTACAAAATCT 473294 30 100.0 37 .............................. TGACACCCTTGTCTCCATAACGATTCTTCTCAATTAC 473227 30 100.0 36 .............................. CAACCAACATTATAAAAATGTGGATGAATTTCTTAA 473161 30 100.0 36 .............................. TTCCATCTTGCTTTAGCGCCAGCCAATGGAAAAGCC 473095 30 100.0 37 .............................. CTTGGAGGAAATAAATGAGCCTACACAAGAAGTTGGA 473028 30 100.0 37 .............................. TGTCAAGTGGAGATGTAAGTTTATCACATCCTAATTT 472961 30 100.0 36 .............................. TCCCATACGCCGTACTTAAACAGCTTCTCTCCATCT 472895 30 100.0 36 .............................. TTACGCCGATTTTATTCTTTGTGGAAACTTCCTCAA 472829 30 100.0 37 .............................. AGGAGTGAGACTCCCTGGCTCGTGATTTCCACAAGTG 472762 30 100.0 39 .............................. TATAGCAACCTCAAAATCGGCTACTGGCTCTTTTTCACG 472693 30 100.0 36 .............................. CTTATCCCTCTTTTCAAAATAACAGTACTTGTCTCT 472627 30 100.0 36 .............................. TCCCATACGCCGTACTTAAACAGCTTCTCTCCATCT 472561 30 100.0 36 .............................. AGCCATGGATGCTCTTCGTGAGTCAGCACGGGCTTC 472495 30 100.0 36 .............................. AAAGGCTTGAGGCCAAGATAAACGTGAAGGAGGGAG 472429 30 100.0 37 .............................. CCTCTTTTGTTTGAATGGAAAATTTGGAGGAATCAAT 472362 30 100.0 36 .............................. GTAAGTGCCTCTGTTGATTTTTCGATCGTCTTATCA 472296 30 100.0 35 .............................. TGTATCCGTATTTTCTTATGTACAAGAGGTTGGAG 472231 30 100.0 36 .............................. GCCGCTGCTTCCATTTCAGCAAATGTTTCAGACATC 472165 30 100.0 36 .............................. AAAATTCCTCCTCGAGTTTTTCGTATTCTTCATCAG 472099 30 100.0 37 .............................. ACTTGTAAGTACCGTCTCCTAAGTCCTTAACCGTTAT 472032 30 100.0 36 .............................. ACATCTTTAACTTCTCCTAAAACTTCTAAAGGAGAA 471966 30 100.0 37 .............................. CTTCCATACTACGCCTCCGATATCGTCCAGTCTCCGT 471899 30 100.0 36 .............................. GCCGCTGCTTCCATTTCAGCAAATGTTTCAGACATC 471833 30 100.0 36 .............................. TTCTCTTCACTCCCCTTCCAAAAATTCTTTGGAAAC 471767 30 100.0 37 .............................. AACCAGGGTAGTCTGCCGCAGCAGTATCATTCAAACA 471700 30 100.0 36 .............................. TTTGGACCGCCTGTTCATCTTTTTCTCTTTGTATTC 471634 30 100.0 37 .............................. ATTGCCTTGAGGATCTCCTGCCATATTTCAGGATCAT 471567 30 100.0 37 .............................. TCTCGTGGAATTCCACATAGAAGAGGATTGGGTATAC 471500 30 100.0 37 .............................. GAATTCTACCAAATATTCGTCGAATTCTTTTTCGGCT 471433 30 100.0 37 .............................. CTTTGGGATATGCTTGTAAAAGACACTTGGCAAAGCA 471366 30 100.0 37 .............................. TCGGGGAAAAAGGAGCAGAAGCAGTTATTCCTTTAAA 471299 30 100.0 36 .............................. CAGCGACAGACCAAGATGTTTATGACGTAGCTATTG 471233 30 100.0 36 .............................. AACGAAATGAGAACACATACATTTCAGAATTCACAA 471167 30 100.0 36 .............................. CAAAATTAAACAGAAAGAAGAAGAAAAAGCGAGGAG 471101 30 100.0 38 .............................. CGTGTTAGATTTTTTTGGCCTACCCATGTATCCATCCA 471033 30 100.0 37 .............................. AGGATCTCCCGGGGTAGAAGCCTACCCCGGGCACTCT 470966 30 100.0 37 .............................. TTCAAAATCTCAACAAGTTCGACCACGTCCCAGACTT 470899 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 54 30 99.6 37 GTTTGTAGCGTACCTATAAGGGATTGAAAC # Left flank : TTCCCATTGTGGTTTCCTTGATCCTTCTTATAAGAATAGAAACAAGACTTGAAAATCTTACAAAAGCAATAAATGAATTGTCTCAAGCAATACTTAATCTCTCAGGAAAAACTTCTTCCTAACTTTATAATCTACCAGCTGAGGCATAAACTCATCTCAGCTGGTAGGCTTTAAATTTGTTACATAATACCATTCAACAAAAACATTATTTTATCTAAACTTTTTAAGATCGACAGAAATTGTAACAAAAAATCAAAGCAAATTTTTAAAGAAAAACCTCATTATTACTCAATTTCATAAAAATTTTCTAACTTTTCTGAGTAGAATCTCTCTAAAATCTTCTTAAATACTTCATTTAAAAGTTTTTAATTTTATTCTTAAAAGCTTATTTCTTCGTCGACCCCCAATAACCCCCTAAACCCCGGGGGATCGACAGACCTATAAATTTTCCATTCCATACCTCTTTACATCTTATTCTTTTTATGCTATATTATCCTCAA # Right flank : CACTGTCATTAATTGCAAAGAGAAAAATTATGTAATAAAATCTATATCATATATGAGAAAATTTATGCAGAGATTTTTGAAAGGACATAAGCCCACTTTAGGAGCTCTTGAGATATTAAAATATATAGGTCCTGGGTTTTTAGTAACTGTTGGGTTTATTGACCCTGGTAATTGGGCCTCTAATATGGCAGCAGGATCGCAATTTGGGTATAAATTACTTTGGATGGTAACCCTCTCCACCATAATGCTCATATTTTTACAACATAATGCAGCCCACTTAGGAATTGCTACAGGACTTTGTCTCTCAGAAGCTATCTCTAAATATTTCCCTAAATTTCTTCGTTATTTTGTCCTTGTTACTGCTATGCTTGCCTCTATCTCTACTGCCCTTGCAGAGATATTAGGAGCTGCTATTGGGCTTAATATGCTTTTTAACATTCCTATAAATATAGGGGCATTCATTACTACTATTGTGGTAATACTGATGCTACTTTCTAATA # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTAGCGTACCTATAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: R [matched GTTTGTAGGGTACCTATGAGGGATCGAAAC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 617312-615153 **** Predicted by CRISPRDetect 2.4 *** >NC_011661.1 Dictyoglomus turgidum DSM 6724, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 617311 30 80.0 31 AA.....................G.T..TT TTAAGCGGTAGCTTTTTTGCCCTTTTTACGG T [617287] 617249 30 100.0 36 .............................. TCTTCATCACATCTTCACCCCCCTTATGTCTACAAC 617183 30 100.0 36 .............................. CCAAATCTCCAGCTCTTCCCTGGATTAAATTTTTCT 617117 30 100.0 37 .............................. ATGTAATACCCAAGCCGACATCTGGAAACGTAAGTTG 617050 30 100.0 35 .............................. TAAGAACAAGTGTCTTGTAATTGTTGATTATCTCC 616985 30 100.0 37 .............................. AGATACAAATCCTTTTTTTTATGAATATGCCAAAGAA 616918 30 100.0 35 .............................. TAAGAACAAGTGTCTTGTAATTGTTGATTATCTCC 616853 30 100.0 37 .............................. AGATACAAATCCTTTTTTTTATGAATATGCCAAAGAA 616786 30 100.0 37 .............................. TGATGGTACTGGAGAGAGATCTCACGCGCCCTTAGAA 616719 30 100.0 37 .............................. TTCAGCAATGCATAGGATAAATGGGTTTTACCTACTC 616652 30 100.0 37 .............................. ATCGTTGTAAAACCCATTAGTAGGTCTGGCGCTATTC 616585 30 100.0 37 .............................. TTTTCTTTTTCTTCAATTTCAGGGATATTCAATTCAC 616518 30 100.0 37 .............................. TCCCAATCAGGTTCAATCGGAGTGTTCATTACTACTC 616451 30 100.0 37 .............................. GATGGATTTGTCTATGACGTTTCTGGAGGTACTATCC 616384 30 100.0 36 .............................. ATGATAAAGAAATTAAGAAGATTATCATAGAGATCC 616318 30 100.0 37 .............................. TCCTTTAGATACCTGACTTGAGAAACTTTCCAAATTG 616251 30 100.0 38 .............................. GGTACGTCAGGGATAACGATGTTCTTAACGAGCTTTAC 616183 30 100.0 37 .............................. CCCACATAGATGCAAAACATTGAAATTTTGTTGAAAT 616116 30 100.0 38 .............................. ATGCCTGAAGAGGCAATAAAATACAAAGCTTCTGCTAA 616048 30 100.0 37 .............................. ACACTCTTCTCATTTGATACAGACAAAACTACTTGCC 615981 30 100.0 37 .............................. TCCCAAATCTCTCTTTCCACTGGAAGCATGTGTACAT 615914 30 100.0 38 .............................. TGGCCTTTTTCAACCCTCTCGCCTCCTTCCCCTGCTTT 615846 30 100.0 35 .............................. ATATAGTTGGGCGTCTGGTTTATTCTTGTAGTCTA 615781 30 100.0 36 .............................. AAGTCTACTGCCCACTTAAGAACAGGACTAAAAAGG 615715 30 100.0 37 .............................. TATTCCTCATCACTCATGCTATCTATGTCGTAGAAAG 615648 30 100.0 35 .............................. GACCAATGGGATTCTTAAAAAAAATAAAAAAGGGA 615583 30 100.0 38 .............................. TATACAACCTCCCTTTCGTACCCCTCAGGGATATTTGT 615515 30 100.0 36 .............................. GTTTGAATAAACTTCTAAGAGAATCCCCTCTTTTTT 615449 30 100.0 36 .............................. AATTCGCTCGCTTTTTTGAGTTCACGGATGTAGAGT 615383 30 100.0 38 .............................. TTTCAAACCCTCCCCTTCAAAAGAATTTTTGGGAGTCC 615315 30 100.0 37 .............................. GAGTACTCATATGAGTATGACCCTGAGGAATGGGCCC 615248 30 100.0 36 .............................. TTCTTTCATAGATCTTTAAATTTTTTACCCCGGCAT 615182 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 33 30 99.4 37 GTTTGTAGCGTACCTATAAGGGATTGAAAC # Left flank : TGTCCATGCAATTTTTCACACTTACCTTTATAACTTTCTAAATTGTGAGCTGCGTCAAATTTAAACTCACGTATAAGGAACATCTCAAATCTCCCTAAGTTTTTTGTAAATTATATCATTTAAAATGAGAAACTAAATGGAATTTTCTGTTTAAAAATCTTTAAAAAAATACCATTTTGTTACATAATACCATTCAACAAAAACATTATTTTATCTAAACTTTTTAAGATCGACAGAAATTGTAACAAAAAATCAAAGCAAATTTTTAAAGAAAAACCTCATTATTACTCAATTTCATAAAAATTTTCTAACTTTTCTGAGTAGAATCTCTCTAAAATCTTCTTAAATACTTCATTTAAAAGTTTTTAATTTTATTCTTAAAAGCTTATTTCTTCGTCGACCCCCAATAACCCCCTAAACCCCGGGGGATCGACAGACCTATAAATTTTCCATTCCATACCTCTTTACATCTTATTCTTTTTATGCTATATTATCCTCAA # Right flank : GAGGAGGGGGTAAAGAGAATATCTTGATTGTGATATTTTTTACTTTTGCTTTTCACTGAAATCTACATTAGCTTTCTCATTGTTTATAGCACTAATTTTATTAGTTCTAATTTTCATTGTAATTGTTTTTTAATCTGCCCCATTAAAGAAATCTCTACTTTAAAGAAAAAGTTTTCAGAATTAGATGATATATCGTTAACAAAGCTCAAGGGCTACAAATAAATTTAGAAAAATATTTTACTTAAATAAAAAAATTTATGTTAAAATATTTAATAATGGAAGTTGAGGATATAAGCCTTGAAATAACAGAGAAAGATGATTACACTATTCTTTACTTTAAATTAAAAAGTAATCTTGACCCCTCTATACTCAAAAAAATTTCTCCACCTAAAATCAACCTGAGAAGAGGCTTAATAATTTCTGGAAGAGGACCTATATGGCTTTATGCCTATTTAGTTCATTATTATCATCCTACTCCTTTTATTGCTATTTATGATCCA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTAGCGTACCTATAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: R [matched GTTTGTAGGGTACCTATGAGGGATCGAAAC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //