Array 1 290469-291425 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABGBN010000001.1 Pelistega suis strain 3340-03 Scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 290469 36 100.0 30 .................................... AATGCCGACAGAAAGCTAAAACTAAGCGAT 290535 36 100.0 30 .................................... ACTCCATAGTGACTAATGTTGCAGAGGCAG 290601 36 100.0 29 .................................... AGTAATCGTGCGTGGAAATTCGAGCACTC 290666 36 100.0 30 .................................... CGTTAATGTAAGTCAATTCTATTTTCATTT 290732 36 100.0 30 .................................... TTAATTTCTTTTCAAAAGCAAGATGGCGAT 290798 36 100.0 30 .................................... TAGATGATGCCACTGTATTAAATATGCTAA 290864 36 100.0 30 .................................... GAAGTTGAGGCGATTAATCCAATCTACATA 290930 36 100.0 30 .................................... ATGTCTTTAATAATTGTGTGTGCTTGTACG 290996 36 100.0 30 .................................... AACTTAACATTATGATGTTTAAACAGGCTT 291062 36 100.0 29 .................................... ATATTTTTAATTATACTGCCAATATTAAA 291127 36 100.0 30 .................................... TATGGGATGCAGTTATGGGCATTACTTAAA 291193 36 97.2 29 ...................................T GGCAATGCGATTACAGTATCAACCATCAG 291258 36 100.0 30 .................................... AGAATATAACGATACGCGACAACTCAATAC 291324 36 100.0 30 .................................... AAAACACGAGCAATCAGCTGTACACGCATT 291390 35 91.7 0 .............................A.-A... | A [291417] ========== ====== ====== ====== ==================================== ============================== ================== 15 36 99.3 30 AGTTTAGCAGATTAAGAAATGAACTCTAAGCGGAAC # Left flank : GAAGTTAGCAGTTTCATTGGCACAAGTGTATTTGGGAGAGAGGGAAAAACTAGAATTGCCACTTATTGGCGCGCCTATTATTTTAGGGGCGATTATGTAGGAGAGATGTATGTTATCGGGGTATAGAGCAATGTGGTTACTTGTCATGTTCGATTTGCCCGTTACGCAGAAGGCTGAGCGTAAAGAGGCAGCAGAGTTTCGGAATTATTTATTAGACTTGGGATTTGAGATGGCACAGTTCAGTGTATATATGCGATTTTTTACGAGTGCTAAACAAATTGAAACGTGTTGCCAACGTATCTGTGCAGCTTTGCCAAAAGGTGGTAAAGTGAACATAATGCAGTTTACTGATAAGCAATACGAGAAGATTATTTCATTCTATGGACAGGTTAGACAGCCAGAAAAAAGTTCACCAGATCAATTTGAGTTATTTTAATGAGTGATTTTTATAAACTGATACCCCATAATATCTTTTCAAATCAAAGTGTTATGGGGTATCG # Right flank : CAACAGAGAGGTATCCAAAATTTCCATATCTGCTTAGAGGATTATTTGTATCAGTATTTTTAATCATATAATTGATATATACGGCAAATTGCCGTATAATTTATCGTGTATAGGAGATTTTGTATGGAAAAAATAGCAACGGCTCGTCTTGAAGCAAGACTACAGCAGGATATTTATAACATCATTAAGCAAGCTGCAAAAATGACTGGTAAATCGGTTACTGAGTTTGTGGTTAATTCTGCTTATTCTGAGGCAACAAAAGCCATTAAAGAGCATTCTTTGATTGAGTTGGCTATTAGTGATCAGCATAAGTTGATTAATGCATTAGCACAAGATTATGAGCCTAATGAGGCAATGAAACGAGCTGCCAAACGCCATCAAGCCATTTTGCAGGAAAAATAAATGACATATTCGTTCGTTGAATTGTCTTCTTCAGTGAATAAAAAGGATTTTGCCAGTCGTTTTGATGCTTTAAATGAGTATTTAAGAAAATTTGCCGC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTTTAGCAGATTAAGAAATGAACTCTAAGCGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //