Array 1 290469-291425 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JABGBN010000001.1 Pelistega suis strain 3340-03 Scaffold1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    290469	    36	 100.0	    30	....................................	AATGCCGACAGAAAGCTAAAACTAAGCGAT	
    290535	    36	 100.0	    30	....................................	ACTCCATAGTGACTAATGTTGCAGAGGCAG	
    290601	    36	 100.0	    29	....................................	AGTAATCGTGCGTGGAAATTCGAGCACTC 	
    290666	    36	 100.0	    30	....................................	CGTTAATGTAAGTCAATTCTATTTTCATTT	
    290732	    36	 100.0	    30	....................................	TTAATTTCTTTTCAAAAGCAAGATGGCGAT	
    290798	    36	 100.0	    30	....................................	TAGATGATGCCACTGTATTAAATATGCTAA	
    290864	    36	 100.0	    30	....................................	GAAGTTGAGGCGATTAATCCAATCTACATA	
    290930	    36	 100.0	    30	....................................	ATGTCTTTAATAATTGTGTGTGCTTGTACG	
    290996	    36	 100.0	    30	....................................	AACTTAACATTATGATGTTTAAACAGGCTT	
    291062	    36	 100.0	    29	....................................	ATATTTTTAATTATACTGCCAATATTAAA 	
    291127	    36	 100.0	    30	....................................	TATGGGATGCAGTTATGGGCATTACTTAAA	
    291193	    36	  97.2	    29	...................................T	GGCAATGCGATTACAGTATCAACCATCAG 	
    291258	    36	 100.0	    30	....................................	AGAATATAACGATACGCGACAACTCAATAC	
    291324	    36	 100.0	    30	....................................	AAAACACGAGCAATCAGCTGTACACGCATT	
    291390	    35	  91.7	     0	.............................A.-A...	|                             	A [291417]
==========	======	======	======	====================================	==============================	==================
        15	    36	  99.3	    30	AGTTTAGCAGATTAAGAAATGAACTCTAAGCGGAAC	                              	       

# Left flank :   GAAGTTAGCAGTTTCATTGGCACAAGTGTATTTGGGAGAGAGGGAAAAACTAGAATTGCCACTTATTGGCGCGCCTATTATTTTAGGGGCGATTATGTAGGAGAGATGTATGTTATCGGGGTATAGAGCAATGTGGTTACTTGTCATGTTCGATTTGCCCGTTACGCAGAAGGCTGAGCGTAAAGAGGCAGCAGAGTTTCGGAATTATTTATTAGACTTGGGATTTGAGATGGCACAGTTCAGTGTATATATGCGATTTTTTACGAGTGCTAAACAAATTGAAACGTGTTGCCAACGTATCTGTGCAGCTTTGCCAAAAGGTGGTAAAGTGAACATAATGCAGTTTACTGATAAGCAATACGAGAAGATTATTTCATTCTATGGACAGGTTAGACAGCCAGAAAAAAGTTCACCAGATCAATTTGAGTTATTTTAATGAGTGATTTTTATAAACTGATACCCCATAATATCTTTTCAAATCAAAGTGTTATGGGGTATCG
# Right flank :  CAACAGAGAGGTATCCAAAATTTCCATATCTGCTTAGAGGATTATTTGTATCAGTATTTTTAATCATATAATTGATATATACGGCAAATTGCCGTATAATTTATCGTGTATAGGAGATTTTGTATGGAAAAAATAGCAACGGCTCGTCTTGAAGCAAGACTACAGCAGGATATTTATAACATCATTAAGCAAGCTGCAAAAATGACTGGTAAATCGGTTACTGAGTTTGTGGTTAATTCTGCTTATTCTGAGGCAACAAAAGCCATTAAAGAGCATTCTTTGATTGAGTTGGCTATTAGTGATCAGCATAAGTTGATTAATGCATTAGCACAAGATTATGAGCCTAATGAGGCAATGAAACGAGCTGCCAAACGCCATCAAGCCATTTTGCAGGAAAAATAAATGACATATTCGTTCGTTGAATTGTCTTCTTCAGTGAATAAAAAGGATTTTGCCAGTCGTTTTGATGCTTTAAATGAGTATTTAAGAAAATTTGCCGC

# Questionable array : NO	 Score: 3.22
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     AGTTTAGCAGATTAAGAAATGAACTCTAAGCGGAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:63.89%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,-0.60] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.41,0   Confidence: MEDIUM] 

# Array family : NA
//