Array 1 2088282-2095611 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033241.1 Saccharolobus solfataricus strain SUL120 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ============================================ ================== 2088282 25 100.0 37 ......................... TCACATCCCTCACAATCCATAATGAAAATGTCGGCAT 2088344 25 100.0 38 ......................... ATTTTAGCAATGCAATAGATCAACAATTGAAAGAAACT 2088407 25 100.0 39 ......................... ATTTTCATCTCTTGGATTGAAAATAAATGAATTTTCTTC 2088471 25 100.0 41 ......................... TGTTTCACAAATTTCAAACTTGCAAACGCAACAATTAAATA 2088537 25 100.0 40 ......................... GTTTTTGGTCAAATATTTGGACAACACTTACAAGAATTGG 2088602 25 100.0 38 ......................... TAGTCAACGACAAAGTGCTTAAAACCCGTGTTATACTC 2088665 25 100.0 39 ......................... GCTGTAATAGTCGCAATAGCAAAAGCCGAAACAATGAGT 2088729 25 100.0 41 ......................... CAATAGAATTTTTCTTAGTTGGCATTGACAAGTATAATTCT 2088795 25 100.0 40 ......................... CAAAATTCCAAACTTTGGGAATTTCTAGTTTCCAAATTTC 2088860 25 100.0 39 ......................... TTTAAACGCCTTGCAATGGTAGAAACATCAGTAGAAGAC 2088924 25 100.0 41 ......................... CGCTTTCGACTGCGACAACTGTCGTTTGGCTCATTTGTTGC 2088990 25 100.0 38 ......................... TTATTTCAAATACTATTATCTCCGCCATATGTTTACAT 2089053 25 100.0 38 ......................... ATTATCTGCAATTTTAGCAACTGAGAGGGCAATAATTT 2089116 25 100.0 40 ......................... TTTTTTCTTTAAAAGCTCTAGGCAGTTCATTTCTATTTCA 2089181 25 100.0 39 ......................... CATGCCAAATTTGTAATCCCTAGCTTGCTGAACAAAATA 2089245 25 100.0 44 ......................... AGTACTGATAATCTGAAGGTATTGGACTAGAACCCATGAAGTTC 2089314 25 100.0 37 ......................... GCTTTAACTTGGTACGCACTTTACGCCATGATAAACG 2089376 25 100.0 39 ......................... GAATTTTGTGTTACTGCAACGCCAAGATTTTCAAATGTT 2089440 25 100.0 36 ......................... GTTGAATTTTTGCAACTGGTATGTTGTATTTTTGCA 2089501 25 100.0 42 ......................... AATTTGTTACACGGCTAGGATTTTTTTTCCTAGATGTACAAT 2089568 25 100.0 38 ......................... TTCTAATCTTTTGCCCATTACTGCATCATATCTACTAG 2089631 25 100.0 38 ......................... ATCTTTACCTTTATATAAATCTTGTTCGTAACAAATAA 2089694 25 100.0 37 ......................... ACAAAACGAGGAGTTTATAGTAAAATCAACTATGAAA 2089756 25 100.0 35 ......................... ATTATTTGAAGAGAGGGTGAGAGAAGCATGAAAAG 2089816 25 100.0 36 ......................... AACTACAACGAGGTGAGAAACGATGACTAAACGTTT 2089877 25 100.0 38 ......................... TTTAACCAGCATAACAGCATCTAAAAGAATGGGAATTG 2089940 25 100.0 36 ......................... TAGATATATGGCGATGAATTGCATTAGTCAGTGGTG 2090001 25 100.0 39 ......................... ATTTTTAACGCTATGACGCTAGCCCTCATGTTAGCTTTT 2090065 25 100.0 37 ......................... AAAGTTTGTTCTTCTGTTTCGTTTTGTTGTTCTGACT 2090127 25 100.0 38 ......................... CCCCTTTTGCCGTCTTTTTAGTTACCACAATGCACCAA 2090190 25 100.0 39 ......................... CCGTATCCAGAAATAATTAACCAATCGCTTGTTTGTGAC 2090254 25 100.0 37 ......................... AAATTAACGTAAAGAGGGAATTTCTCGCACCTATCAA 2090316 25 100.0 42 ......................... GAATAAACATTGGTACTGTACTTTGTAGTACTGCATACGGTG 2090383 25 100.0 39 ......................... GCATCTGTCGGCAACCTCACTTATTCACGTGGGGGTGCG 2090447 25 100.0 37 ......................... TCTCTCAGAAACTCCCAACAAATTTGCTATTTGTTGA 2090509 25 100.0 42 ......................... TTGAACTTGTAGAAATTGTTCATATGAAACAGCATAATTTTC 2090576 25 100.0 40 ......................... TTTACAGTTAATGGAATTCCTTTTTGTGCATACAATAACG 2090641 25 100.0 36 ......................... CTCATTATTTCATCATAAAGATTATCCACTGCAATT 2090702 25 100.0 39 ......................... ATGCATTCCACCTCTGTTTCTTCCTCTTTACGCATTTCT 2090766 25 100.0 36 ......................... CTCTATATTCTACTATCCTCCCTCTCTGCTCTGGCG 2090827 25 100.0 39 ......................... ATCTCTGATTTCTCAGTTCTCTAATTCCGAATACTACAT 2090891 25 100.0 41 ......................... TAAAACTGCTCAAAAATGCTAGAATTATAATTATGGCTATG 2090957 25 100.0 41 ......................... ATTTTGAATGTTACGACTCTCGTCATTTTTCCACCTCTTCT 2091023 25 100.0 36 ......................... GGAGTAATCTTTCCAGTCAAAAGACTTTCAGCCCTC 2091084 25 100.0 36 ......................... TTTATAAGCTTCAATAGAGCTTTATCTTGAGCAATC 2091145 25 100.0 39 ......................... ATAAATGGTACGTCTTCAGGCGGAAAGCCTTCCATTTGT 2091209 25 100.0 34 ......................... ATATTACCTTGCTGGATAAAGTTAATGATTTCAT 2091268 25 100.0 38 ......................... ATCTTTAATAAATCCTCCTTTATTCTCATGTAATGCAT 2091331 25 100.0 40 ......................... TTATATTACGATAAAAGTGCCAGATATGGTTGTTGGCATT 2091396 25 100.0 40 ......................... CCCACCAGAAAAAAAGAAGGGTGGGGGGCAAGGGCCCCGG 2091461 25 100.0 40 ......................... GCATATATTATTGGCTGAGGTAAGGTCGGCATATCTGTCG 2091526 25 100.0 39 ......................... CCATCCAAGCCTTGATTTGATATTCCTTTTAATGTCTGC 2091590 25 100.0 40 ......................... TTCATTATCCTCAATTTTTTCTATACCCTTGTTGTTCATT 2091655 25 100.0 39 ......................... CCCCACTGGAATGCACCATTTCTTGCAAGTAATACATTT 2091719 25 100.0 40 ......................... ATGCAGTTTGGCCTAAAGGAATATATACGTTAATGTCTGC 2091784 25 100.0 38 ......................... CCATTATTCGGCACTGCATTTAATTGAAGCACTATACT 2091847 25 100.0 39 ......................... AATATTTTGAATATTTGTACACCCATATGAAAAACGCAG 2091911 25 100.0 37 ......................... TATCTCTTATTCGTAAGGGTTAAAACAAAATTATCTT 2091973 25 100.0 35 ......................... TTTTTATTTAAGAACACTGATGGAAAGATCTATAG 2092033 25 100.0 37 ......................... ACCCATATTGAAGAGTTTGAGCATAAAAATGATTCTA 2092095 25 100.0 38 ......................... TGATTGCGTTACGTCACCATGGGGCTATTCGTTCTGAT 2092158 25 100.0 39 ......................... TTAATGTGAAGAAAATTGTTAAACGCGTTTTGCGACATT 2092222 25 100.0 40 ......................... CACTACATCTATTGTTTTTCCTTTTGTAAGACATTCCTCA 2092287 25 100.0 40 ......................... CTGTTATTACGTCTCTAATTGCCACGGGCTTAAAAAGCGG 2092352 25 100.0 39 ......................... ATCAATTTACGCCTTTTAGAAATCCAATTTCAATTATTC 2092416 25 100.0 42 ......................... GAAGCAATAGCCAACCCACAAAGCTGACACTATTCATTCGTC 2092483 25 100.0 38 ......................... GTATTCAAAAGAGAACTGGGGGATTCAAGGTAATACCT 2092546 25 100.0 36 ......................... CTCCGTAAGGCCCCCATACAGTAAAGTAGCAGTTTT 2092607 25 100.0 37 ......................... ATAGAAATATAAATCTCAGCAATTCTTGATATATTGT 2092669 25 100.0 36 ......................... TCCGTTATCATGTTGACTGGAAATGCGTTTAATAGT 2092730 25 100.0 39 ......................... ACCCACAGCACATTGCCATATCCACTAAAATTATACTGA 2092794 25 100.0 38 ......................... ATAAATATGTTAACGAATGTTGTAAATTGGTATTCGTT 2092857 25 100.0 38 ......................... AAAGGAATAATAAGCATGAACCGGGGAGTTCACGCTTT 2092920 25 100.0 38 ......................... TCAAACTCATGAAGCTACTGTAATCCATTTCACATAAA 2092983 25 100.0 38 ......................... ATCATTTCGTGAAATTTTCGCAACAAACGAAAAAAATT 2093046 25 100.0 40 ......................... ATTATATTGATAAATTGATAAGAATGCCCGAAAATGATTT 2093111 25 100.0 42 ......................... AAAAACTTTTCACATTCGACATTAAAAAATAAAATAATTTTG 2093178 25 96.0 39 ...............A......... AATTCGTATACCTTAGTAGTATTATCATCAATATTGTAT 2093242 25 100.0 39 ......................... TTCTCAATTGCCTTTCCCACGATAACCTCAATCCAGTAG 2093306 25 100.0 37 ......................... TCTACGTTGTTAAATTCATATACAGCTTGGCTCATAT 2093368 25 100.0 38 ......................... ACGTATTTAAATTTTTTGGTAGTACTTTCCTTGTGTAT 2093431 25 100.0 41 ......................... AGTATACAACAATGCAATAAGTGTTGATAGCTTTGCATCTT 2093497 25 100.0 40 ......................... CGCTTCTCCGTCTTTTCAGTTATAATGCGTAAAAGCTTAC 2093562 25 100.0 37 ......................... CAGCAAGAAGTTCACTCTCTACATCTTATGATTTCGG 2093624 25 100.0 36 ......................... CGTTTTCGTCTGGATTATTTATTATCTCTAAGCCCT 2093685 25 100.0 36 ......................... ACCTTTATTTTAAGTCCTAGCCTCTTCCCTATCCAT 2093746 25 100.0 38 ......................... TTGTTTCACCTCCTTATTAAAAGCGACAGACGGTCGAC 2093809 25 100.0 37 ......................... TCATTTCACTGTGTAGAGGTTGAACACCTAATTTTTT 2093871 25 100.0 40 ......................... CTTTGATTGTCCGCTCTCGTTCTTTTCCACACTGAAGATG 2093936 25 100.0 38 ......................... AGCTTTATGACACTCATTATCATATACTCAAAATTATA 2093999 25 100.0 40 ......................... TCGATTTTTTTCGAGGATGGATTTGTTTCATGAAAGAGCC 2094064 25 100.0 39 ......................... CAGCTCGACGATGACGAATACAAGATGCTGTATAATGCG 2094128 25 100.0 40 ......................... TTTCTCAACTGATCCACGGCTTCAGAGAAGATGTTTGGAT 2094193 25 100.0 39 ......................... GAACGAACATGGTAAGCCCTGAGGACCTTGAAAACGATG 2094257 25 100.0 40 ......................... CTCAGCAGATTTAAACTAACGATATTAATTGTACACACTG 2094322 25 100.0 39 ......................... TTAAGTTGTTTTGCTCTATTTAAAACAAAAATAATCCAA 2094386 25 100.0 39 ......................... CAAGTGCAATAGCAAACTACTACTAAATATAACATATAT 2094450 25 100.0 38 ......................... CTATATGGGGTCAGGGTGGAACTAAAATCGTGGCTTTA 2094513 25 100.0 39 ......................... CTTACTTAAGCCTAATATCTCCGCAACTTCATCAATAGT 2094577 25 100.0 41 ......................... GAACTCTCTATTGCTGACGAACTAAGAGAAAATTGTTTCAA 2094643 25 100.0 38 ......................... TCTAACAATGAATCTGTCATAAAGTGCCCGCAACTCTT 2094706 25 100.0 36 ......................... AGATTATCAATCAAGTGATAGAGATATTGCAATTTT 2094767 25 100.0 39 ......................... TGTTAGATACGGCAAGGCAAAGATTACAAACAAGGATGT 2094831 25 100.0 39 ......................... AAAATGGTGCTTATCGCTATTAGGTAGTCGGCGTTGTTT 2094895 25 100.0 36 ......................... ACTACTCTTACTTTTTGCATTCCTTTTGGAGTAGGC 2094956 25 100.0 39 ......................... TATTTACGTGCATAAAGAACATACCTCCAGCGCCTCCTC 2095020 25 100.0 37 ......................... TCGTAAACTTGAAACTGACCCGTATATCCGAATTTAC 2095082 25 100.0 39 ......................... GTATTATTCTCATAATAGGAACCGCCCTAGTGTATGCTA 2095146 25 100.0 37 ......................... CGTGATTACATGGAACATTACTTTTCCACCGAATATT 2095208 25 100.0 39 ......................... TTTATGTTTTCGAGTTCTTCTGGTCTTAACATCACTCTA 2095272 25 100.0 36 ......................... GTCAGTTATACGCTACATATGAAAAGATAAATGAAG 2095333 25 100.0 38 ......................... ATCTCTCTTAGTTTTGTCAAAGCTTCTGACCCGCTCCT 2095396 25 100.0 40 ......................... TCTATCTTTATTGTTACAACTTTTGCATACGACATAATTT 2095461 25 100.0 39 ......................... TCCTCTATCATCTCCTTTAAGCACTGTGTAATCTCACTT 2095525 25 100.0 37 ......................... TAATACTGCAGTAACGGTACAAGTCATTGACAGCGCT 2095587 25 100.0 0 ......................... | ========== ====== ====== ====== ========================= ============================================ ================== 116 25 100.0 39 GATTAATCCCAAAAGGAATTGAAAG # Left flank : GGTAAGAGCTGATGTATATAATCTTTTTGTATTTATGCATATATGATAAAACTTATTCTTAATTCTCAGATAAACGATTTTCATTATATTGGCGGTTATTAATTGGGAAAACAAACGTGCTTAAAAAGCTGTTTAAAAAGATAATGGTGCCTTAAAATGAAAAATTTATAATTGAAGTCGGAATAGTAGTAAACGATTATTTACGTGATGTAACGGTTTTATGAAAGTAAAGAGATAAAGAGAAAACCGGTTAAGTTCGTTTTCATGAAGTTGTTTAAAAGTGTGAAAGTTCGAGTCTCAATGCGACCGAAACGAATCTTTCTATAATAATTGAACGTTTATAAATGATAGGGTGTATTTCAATTTAACATAAAATCCTTGCGACCAGAAATTGTTAAATTAATTACAACTAAAATTGGTCGCATGAAGAGTAAAGGGTAGTCATGAAGATTTATAAGTAAGAAAAGAGAAAGAAAGATAGGAAGTATAAAAACACAACA # Right flank : GATATGGTATTCAGTAAATTCATGCTATAGTCAATTTCTTAGTAAGTGCGAAGAGAAATAGCTTTTGTCTATACAAAGAATACCAGTTAAATCCCTTAACCCACTTATTTCCAACATTCCCCATTTAATAGCCCTTTTTATTTCTTTGCAATTATTACGAAAAAGACTATATTTGCAAGTGCTCAAATGTTTCACGTCAAGAATCCGCAACTAACCCGTTCCCTAAGAACTAAGTATATTTTACACTTCTTTAAACTAATGGCTTACCATTGTTTGATGATGTGCATATCAAGTTATGATAAATCTTATAATGAGAATTCCAGCAAATTAAAAGAAGGCATTACATGCCTCGCCTCTAACAGACCTGAGTTCGCAACTGTAGGAAGGAATTTTGAGGGAAGTGAGGATATGGAAACAATATGTTTCCTTTTTGGCTACGTTACGATGAGAGTTACTTGAGATAAAAGAGTTATTAGTTTGCATTGTCTATCTATATAATG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAATCCCAAAAGGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.00%AT] # Reference repeat match prediction: F [matched GATTAATCCCAAAAGGAATTGAAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.30,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.37 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 2114597-2110134 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033241.1 Saccharolobus solfataricus strain SUL120 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ============================================ ================== 2114596 25 96.0 40 .........C............... CCATATTATTTGAAGATTGGGGATTTACTTTTTGGGATTG 2114531 25 96.0 38 .........C............... TAATATTCTTCCACTGAATCATCTTTAAACAAAAAATT 2114468 25 96.0 37 .........C............... TTTGCTAATGATTCACCTTCAATTTTCACCATATTAT 2114406 25 96.0 38 .........C............... GTACTTATGTGTTGATGCAAACTCTGCGAATAGATCTA 2114343 25 96.0 36 .........C............... ATCTTAGAGAATTCTGGAGTACCTTCATAATGTGGT 2114282 25 96.0 40 .........C............... GGAATGAGTTTAGATAGCTCTTCATCTATTTTCAAATCAT 2114217 25 96.0 36 .........C............... ATGCTAACAATGCTCCGATAATACCTCCAACTCCTG 2114156 25 96.0 40 .........C............... TACATTATTGTTAGTCGGTACAGCATTTATTTGGACAACA 2114091 25 96.0 41 .........C............... TATTATCCATATTTTCATTATACATTGCACTCAGAATTTTT 2114025 25 96.0 38 .........C............... AAGTCTCCCTCAATGAAAAACTGCGCACAAATTGAGTA 2113962 25 96.0 38 .........C............... CATTTCTTCCTCATTTAGTTCGTCTTTTTCCTGTAATT 2113899 25 96.0 38 .........C............... TGTGACACCTAAGAGTACGTACAGCGTTGGGAAGAAGC 2113836 25 96.0 35 .........C............... ATAATTATTCAAGATGCGATATTGTTTCAAATTTT 2113776 25 96.0 34 .........C............... CTCTAAATGGAATTTGAGAATTTAATATTTTATC 2113717 25 96.0 37 .........C............... AAACAACGCAGCAAAAACGAAGAAGATAACGACATAA 2113655 25 96.0 37 .........C............... GCAAGGGGTAGACCCGCGACCTGTGGGGCACGCACCC 2113593 25 96.0 39 .........C............... ATGTGTCCGTTCGGTGCGATGTATATTTGTACGTCTTTT 2113529 25 96.0 36 .........C............... GCGTTTCTCTCAGTGGAACTCAAGGGCAGACAATTA 2113468 25 96.0 39 .........C............... CCCGAATCCATTAGGTGTAGTTGGAACGAAATATATTAT 2113404 25 96.0 43 .........C............... TTAACCAAAATACACGTTTACCCAGATGGCACGCTGGCTAATT 2113336 25 96.0 36 .........C............... TTGATAGTCACAGCACCTGGGTCTCCATGATATAAT 2113275 25 96.0 39 .........C............... GTTCTAGGCCCTCCACTTTTCACGAGAAAATAAATATCA 2113211 25 96.0 40 .........C............... AATAAACTCTTTGCTTTGAACGGCCACTTTGTGGATTTAT 2113146 25 96.0 38 .........C............... ACATAGAAGATGTTAGCCTTTGAAATGGTTTAGCTAAT 2113083 25 100.0 40 ......................... AATGATATTGCATGGTTCAATAACTATAGAGAAACGGCGT 2113018 25 100.0 40 ......................... CTTTGTGTAAGTGATCGCTTGTACTCGCAATCTTAGCTTG 2112953 25 100.0 39 ......................... TTACTTCTGATGGCATCCTCAAATCTCGCAATTAGTGCT 2112889 25 100.0 34 ......................... ATAAATACTTAAAGACAATATACAGACCATTACC 2112830 25 100.0 41 ......................... AGAACCACACTATATCACTAGCCGAACCGGCAATATTAACA 2112764 25 100.0 39 ......................... GAACATTTCCATGATTTTATCACTAAACTCTTCCAAGTT 2112700 25 100.0 36 ......................... AATCCAACTGTAGCTAGCACGATTCTTGCTAATGTG 2112639 25 100.0 36 ......................... AGCTTCAAACATTTTTATAACTTCATCAACTTGAAG 2112578 25 100.0 38 ......................... CACACCAAGGAACTTCAGCCAAAGATATGCCAAGTGGA 2112515 25 100.0 44 ......................... TGATAAATATGAAGTATTTACTTCCGCAATACTTGATAGAATTC 2112446 25 100.0 37 ......................... GGTTTTAAACATCTCAAGAAGTCTGAGCGGTGGTAAA 2112384 25 100.0 36 ......................... ATCTTCTTTAGAGGTGAAACATTAACAAGTACTTCA 2112323 25 100.0 38 ......................... TCTTCGTCGCTATAAGTTTTTACCCATATTCTAATGCC 2112260 25 100.0 40 ......................... CTAATTTTTTCAGTTAGTTCGTCCAACAATTCAGTGACTT 2112195 25 100.0 38 ......................... ATTTTCTTCTGTGCGAGCTTGTTTACGTCGTTCAGCGT 2112132 25 100.0 39 ......................... AAGATGAAGAAACGCTTAAGATCTTCAACTTGCTGAAGG 2112068 25 100.0 41 ......................... GAGACCAATTAGCAGCAGCAGCCGAAAGCAGCGGTTATGCC 2112002 25 100.0 40 ......................... AGTTAAACGAAGCGAGCAAAAGCGGAAAGAGAGGAAGGGA 2111937 25 100.0 40 ......................... TTGGGATGCGCTGCTAAATGTCCAAACGTCCCCGTAACCG 2111872 25 100.0 35 ......................... TTTACCTCGTCAATTGTGTTACCTTTGCAGAATTT 2111812 25 100.0 40 ......................... CTACTTATTCAGGCCACTACTACTACACTACTCACACTAC 2111747 25 100.0 38 ......................... AGTTGCTGTACCCCCTGTAGTTCGCCTCTAAAGATGTG 2111684 25 100.0 37 ......................... GTAACCTTCATTGTCTCACCCTCCTCCCGTTTCCATG 2111622 25 100.0 36 ......................... AGATAAAAACATGACTGTTACTGTATCTGATCACGG 2111561 25 100.0 38 ......................... CCGTTCTCTGTTCTCTATTCTCTATTCTCTGTATATTC 2111498 25 100.0 42 ......................... ATATATCTAATATTGCATCATTCTTATCGCTCATAATCATAT 2111431 25 100.0 40 ......................... AGTATCACCCTTATCGTAAGTACATTATTGCTTGCGGTTT 2111366 25 100.0 37 ......................... TTACATTCAAATGTTCCATCACTGGTGAAGTTTTGTT 2111304 25 100.0 39 ......................... CTTACCGTAATATCAGTGTTAATGATCATGGTCTCACTC 2111240 25 100.0 40 ......................... TTTATTTTCGTTATTACCAAATCACTAATATTTAATATTG 2111175 25 100.0 38 ......................... TGTAATACTTGAAATCTCCTGCAAACTTTTTCCCTCTG 2111112 25 100.0 40 ......................... TCACCATACACCTCTTCTAACACTTCCTCGAATGGATTTG 2111047 25 100.0 37 ......................... ATCCATGCTGAGTTCAACTACGATGAACTGATGCATG 2110985 25 100.0 37 ......................... TTCTCATCGTAAGGCTTGAAATATATTTTAACACTAG 2110923 25 100.0 39 ......................... TATCTTCCCTTATAACGTATGTGGCGTTGGGGATTTTAC 2110859 25 100.0 39 ......................... TTAGAACTTGCTGATATGGGCATGCTTTCTATTACCCTT 2110795 25 100.0 41 ......................... ATATTATCGAAATCAACTACTCCACCAATATTAAACATTTT 2110729 25 100.0 39 ......................... CCATTATTCGGTACAGCGTTTAACTGTAACACTATACTA 2110665 25 100.0 39 ......................... CCATTATTCGGTACAGCGTTTAACTGTAACACTATACTA 2110601 25 100.0 35 ......................... CGCCTACAACAACAACAACTACCACCACTACCACG 2110541 25 100.0 40 ......................... TGTACGGGTTGGAAGAGACTCTGAATGAGTTTCTATTACT 2110476 25 100.0 38 ......................... ATTCTGTCAAAGTATATTACCAGCTTTATTGAAGAATC 2110413 25 100.0 37 ......................... ATATCTTTTTGGTTATATATTCCAAGTTTCACTTGGT 2110351 25 100.0 39 ......................... TCAACTTATGCGCAATATGACAATGGAGAAAACGTATTT 2110287 25 100.0 41 ......................... TTGACAAATATGATATCATAATAGACGCAAGAGGTGTAGAC 2110221 25 100.0 38 ......................... TTTTGTGTCATCAAAAGTTCATTTAACTCTATCTTCAA 2110158 25 96.0 0 ........................T | ========== ====== ====== ====== ========================= ============================================ ================== 71 25 98.6 38 GATTAATCCTAAAAGGAATTGAAAG # Left flank : CCTTTTATATATAATTTATCCTCATAATTATCTATATACCGTACGTTAATAAAAAGTAATTCTGACGTTAAAAAGATTTTACTTTATCAGCCTTAGTGAAATTAGGAAATATTACGTATTTAAAAGTAAGTTTAAAAAGATAATTATACGTTGCAATGAAAGAAAGATGAAAGGAGAGCGATAAGAGATAAAAAATATTTTTCGATATGATACGAAATCAGTGAAACATTATTATCAAATAGAGAACTTCAAACTTCGTTTTTATGAAGTTGTTTAAAAGTGTGAAAGTTCGAGTCTCAATGCGACCGAAACGAATCTTTCTATAATAATTGAACGTTTATAAATGATACCCAATGTTTCAATTTAACATAAAATCCTTGCGACCAGAAATTGTTAAATTAATTACAACTAAAATTGGTCGCATGAAGAGTAAAGGGTAGTCATGAAGATTTATAAGTAAGAAAGGAGAAAAGAAAAATAGGAAGTATAAAAACACAACA # Right flank : TACGCAATAGAGTCTAAGTAAAATAATCCTCATTAGAGTGAGAAAATAGCGTTTCATTAACCATTAAGTGATTTTACTTCTACCTCTCCAAAGCCAATGTTCCTACTCTTTCCCACGCCGAAGTAATTTACGTAATCCAATAGCCTCCTAATGTTCTCCCTTATCTTACTGCCTTTTCTAGCACTCAACTCAAACACAACCCATCCCACAAACCCCTTATTGGGTATGTTTCCGTAATAAGCAGTCATAGGTCTTATCCTATAGTTCACCTCTCTAAAGTAGTATAACGTCTTACTACCAGTAACTCCAACGATCTTCTTATCCATATATCTATTCCAGTGGGAGGCTATAGAGTAGAAGAGGAGTGGAACGTAAGGGAATAACACGTATCTGTTCTCTTTTCTTTTCATCCTAGGCCTAGGGGGTTGTAAAAGCGTAGGCGTCTTGAAGTGAACTCTGTAAAATCTGGCGTCCTCTGCCATGACGTTTTCCTTTACTGA # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAATCCTAAAAGGAATTGAAAG # Alternate repeat : GATTAATCCCAAAAGGAATTGAAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.00%AT] # Reference repeat match prediction: R [matched GATTAATCCCAAAAGGAATTGAAAG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-2.20,-2.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 3 2125970-2133883 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033241.1 Saccharolobus solfataricus strain SUL120 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ============================================ ================== 2125970 24 100.0 38 ........................ TTTGTAAAACGTATAAGTCCCGTTAATGAGAAGACGGC 2126032 24 100.0 40 ........................ CAACGCCAACTCCGCCAATTTCCGCATTGATGTTCGCTGG 2126096 24 100.0 42 ........................ TCTTCAAACTTCCCACGGCACAACGGAGGCATGCAAATTATT 2126162 24 100.0 40 ........................ GTAGTAAGCTTTCCTTCTTTATCCTCTAGACCGCTGTAGT 2126226 24 100.0 38 ........................ AGCAATGTACGAACCACCACCTGCTCCAGTACTGTTCA 2126288 24 100.0 39 ........................ GAACTGTCGTGGTGTTCATGAAATATGGGTATGCATATT 2126351 24 100.0 37 ........................ GCAAAGAGTCCATTCAATAACACATATTTTGCACATA 2126414 24 100.0 39 ........................ AACATCCTGATCTATACTACCCCTAATCTTTCTGTAGCT 2126477 24 100.0 39 ........................ ATCTGGATGAGCTGTTGATCGGAGACATTAGTTAGGTCT 2126540 24 100.0 40 ........................ CAGTCTGACTCTGAGTTGGCGAATTATTATGAGAAGCTAA 2126604 24 100.0 39 ........................ CTATCCCCAAATCATTCTGCCTAATGCGTCAGGAGGGAG 2126667 24 100.0 39 ........................ ACCACGAGCACGACCTCAAATATAACACCGCCAAAAATC 2126730 24 100.0 41 ........................ TATCTTCCAGATGTCTCAGAAACGCCTTAAAATTATTGATG 2126794 24 100.0 38 ........................ TACATTAGACCCTAGTTGGTTTATCGCTGGTAACGTCG 2126856 24 100.0 40 ........................ ACACTTAGCGACATAAAAACCGCACTGACTTACAATTACC 2126920 24 100.0 40 ........................ CGACATACATATATATGCATTTCCGTGGGAGTGTTACAAA 2126984 24 100.0 36 ........................ ACATATGGTTGGTCTCCAACATTTGGTGAGTATATC 2127045 24 100.0 38 ........................ GCTTCTACCACGATCGTATAGTATTTCTTCCCTATCTT 2127107 24 100.0 39 ........................ ACTTAAGACATTAAACGTTGCCCTAGGTGAACTAGGCAA 2127170 24 100.0 38 ........................ AAACAAACGAGGTTAATTATTCTTAACTGTATCGTGAA 2127232 24 100.0 39 ........................ CCTGGGACAAGTTCTGTTGTAGCTGAGGAGAAACGTATG 2127294 24 100.0 41 ........................ TCTGATAGCACCAGACAAGTAAAAGCGTATATCCTAGTCAA 2127359 24 100.0 39 ........................ AACATATTCTGGTACGGGTTCGCCATCTGGTACACCATT 2127422 24 100.0 39 ........................ TTTCTGTATTTTCTCGCCCTTCTAGCTAAATTTTCTAAA 2127485 24 100.0 37 ........................ AGACGCTGATGATAAGCTGTCTAAGAAGGTTTCAAGG 2127546 24 100.0 38 ........................ CATCCATTTCCGGTACACGATCCCACGTTTGTGTAGTC 2127608 24 100.0 40 ........................ ACATCGCAAGCGATCTATTGTTCAGTCTATTCCTGGCGGC 2127672 24 100.0 38 ........................ AACTCCTTTGCAATCCTATATCTAGTGTAGCCGTCTAA 2127734 24 100.0 37 ........................ CTGCTCCATCAAACGGCCCCGTGAGGGATACTATGAA 2127795 24 100.0 40 ........................ AATTTGAACATAATTCGGCCTCGTCAGTTTTCCACAGATA 2127859 24 100.0 40 ........................ TCCCTAACTTAGGTTGGGGTAAAGAAATAGAACATAGATG 2127922 24 100.0 38 ........................ TTTACTGACAACGCCATCATACTTACTAGCCCAACTAA 2127984 24 100.0 40 ........................ GTCCATTCTCCATTTATCTCAACCTTATCACAAATTTGGA 2128048 24 100.0 41 ........................ TCAGTTCTAGAAAGAATTATTAGCATTAGATCTTCTAGACT 2128113 24 100.0 37 ........................ CTCTCTATCCCAGATGGAATTCCAAAGGATCAAGCAG 2128174 24 100.0 39 ........................ ATCTGAATTTCCTCAGCTTCCATTGCATAATTTATTCTA 2128237 24 100.0 40 ........................ TATTTACCTTAATATTATGTATAATAGATAAGAGCTCCCT 2128301 24 100.0 38 ........................ ACTATGGACCTACTACAGGGCCTATCTGACTTTCTGTC 2128363 24 100.0 36 ........................ TTATTGTCAGAAAAAGAAATTATACTCCGATTAATA 2128425 24 100.0 40 ........................ GTCAAAATTGCCCAACCGAACGTTAGCAAAAATGCAGCAC 2128489 24 100.0 41 ........................ TCCCTTTCAGATTTGCAATATGTTAGAGCGAGCTTCGCAAA 2128554 24 100.0 39 ........................ GCTGAATTGTAAAATTACGTTTATTACTTTCAGTCAACC 2128617 24 100.0 39 ........................ GTTTTATTTATAAACGGCGGGTCTAGATAAAATACAGTT 2128680 24 100.0 40 ........................ TCACTCTTTCAGTCATCATTCTCTTTGCTGAGATTGCTCT 2128744 24 100.0 36 ........................ GCGAAAACAATAGCAGGCGAAATAGAAGATAAAATG 2128803 24 100.0 39 ........................ GCAATAGACAATATAAGGAAGAGCTTACCACCTAGAGGC 2128866 24 100.0 37 ........................ CCTAGAGGCGTAGCGGGCTCACAAGAAAACATTAATG 2128926 24 100.0 38 ........................ AATGCCTGAAGCAATAACGCCCAAGTTACATGCTCTTG 2128988 24 100.0 38 ........................ ATCCCGCTACGGCAATCCCTACGAATAGATCGGCATTA 2129050 24 100.0 38 ........................ GTGTATAAGCACATTAGTAGGATTAGGCACGGTACAAG 2129112 24 100.0 41 ........................ AATCACGAAAGCGATACTAAGGGCAATACAATACAAACATG 2129177 24 100.0 39 ........................ CTTATTTTGGTGTCAATAATCTGTATGTTGCCGTATTGC 2129240 24 100.0 40 ........................ AGATTGTTTTATTAATACCAAGTAGACAATTATATATTTT 2129304 24 100.0 39 ........................ CCAAAACATGTCACATGTGCCGATATTGATATTTACAAA 2129367 24 100.0 38 ........................ AAATCTACCGATCAACGGACGAGGGGGAACGCTAAGAA 2129429 24 100.0 44 ........................ GGGAGTTCCCATTCGATTTTGGGAACCCTCAAGCACAGTCTGTG 2129497 24 100.0 42 ........................ TTGTGCGCCTAGAGTTGCTACGCCTTGTTTCCACACCTCATG 2129562 24 100.0 38 ........................ CTAACTTGTTAAAGTTCTGTTGTAGCTCGTTAAGTTGT 2129624 24 100.0 36 ........................ GTTCCAGCTAAGATGTTCTTTCCTGCAGTCTTTGTT 2129684 24 100.0 40 ........................ AACTAAGCCTTCACTAGGTGAGATAAAGAGCATAGCTATG 2129747 24 100.0 38 ........................ ATCCGTTCTCCGTCCCGATCCGTACCGTTCTCTGTACT 2129809 24 100.0 37 ........................ AGCATAACTTCATCTTCTTCTACAACTTCGACAGCTT 2129870 24 100.0 42 ........................ TTAATTTATTGTCATCAAATCTATTTAGATACGCTAGTATTA 2129936 24 100.0 40 ........................ ATATTTCTTCGAATGGGTTTTCTGTATCACCTTCTTCATG 2129999 24 100.0 40 ........................ CATTTGTTATCAACTGTCCGGGTCCAGCGCTAGATGCGGT 2130063 24 100.0 37 ........................ CAAAGTCAGAGCTGGACTATCGTAGACATCTATAATA 2130124 24 100.0 38 ........................ ACGTAGCCTAGACTTGCTATAACTCCGTTGTATTGCCC 2130186 24 100.0 39 ........................ ATACCAACAGCAACAACAAACTTATTCTTCGCTCATACA 2130249 24 100.0 40 ........................ ACGAACACACCCCTTAAAACTCTTTTTCCAACATTCACCT 2130313 24 100.0 39 ........................ CAAAGTCAGAGCTGGACTATCGTAGACATCTATAATAGA 2130377 24 100.0 39 ........................ TCTTAGCGAACTTGCAAAATATTCCGACCAAAGCTAATA 2130440 24 100.0 40 ........................ TCAGGTGAGGAAGATGGTCTCCAAAACTACTGTTATTGGT 2130504 24 100.0 42 ........................ GAGAGCTACAAACACGCTACCTAATAAAATTTCCAGATTGTA 2130571 24 100.0 37 ........................ ATACAGATTTCGTTATCCATATCCTACATGACTTTCC 2130632 24 100.0 40 ........................ ATACATCGATCTTGTAATTAGATATCCATTGACTGTTATG 2130695 24 100.0 40 ........................ ATGGAATAGGCTCTCAACAGCAGTATAATTGGCAAGTATT 2130759 24 100.0 40 ........................ TCTACTCTTATAATTCCGTTACTTATCTTAACAGAGAACG 2130823 24 100.0 38 ........................ CGTTTCTATTGCAAGGTCTGAGATTTTTGGCCTGAGTA 2130885 24 100.0 41 ........................ GTATTGAAACGCTTAAGGTCAGCTCTAATTCTGTACGGATG 2130949 24 100.0 44 ........................ ATGTTACTAAGTAAGTTTAATAATATATTATAAAATGCCATATA 2131017 24 100.0 38 ........................ CTAAGCAGTGACTCACAGTTTAGACATTCACAAGTATC 2131079 24 100.0 41 ........................ TTCTAAGCGTGTAAAGATCTATCTGACAACACGAAACTATG 2131144 24 100.0 39 ........................ TTGAATATTGTACAAAGGAACGTTTAACCCTATAATAGA 2131208 24 100.0 37 ........................ CAATCCCATTCGTTTTACTCACTTCTAAGAACCTCGC 2131269 24 100.0 40 ........................ AGTCTCTGCATCATGATCCCTGCCCCAGCTAAGACGTTCT 2131333 24 100.0 40 ........................ ACGATTTTCGGTGTGAATAATGTAAATTTGCAAGTATCTG 2131397 24 100.0 39 ........................ GTCTTTATGGCCCTCTGGGTCTTTCCACCATTGAGAGGA 2131460 24 100.0 40 ........................ TTATCCTCATTCTATCGGTGAGTGGAACAAATTGGGTAGC 2131524 24 100.0 40 ........................ ATCGTTATGCTGTAAACTTCCCCGGTTCTCAATCCCGTTT 2131588 24 100.0 40 ........................ AGTTAACAATACTTTATTGTCAAAGAAGCAAGGATATGCG 2131652 24 100.0 42 ........................ TTCAAACTAGATCTAGAAGATTTCTATCGGCATCTTTACATG 2131717 24 100.0 40 ........................ ACGATATGAAAGTTGCCAGAGCCTTAAACAGAATTGGTTC 2131781 24 100.0 39 ........................ GCTTCTTGTCCCTGAACTCCTTCTTGAAATGGATTTATT 2131844 24 100.0 37 ........................ TTTCGTATAAGGACCAGAACGGCAATACCCAAACTGT 2131905 24 100.0 38 ........................ ATCTAGCGTTGTCTCTGCCGTTATATATTTGAAAGTGT 2131967 24 100.0 41 ........................ ATCGCTGATCCAGAACCACGTGGCGAATACAGGAAGAACTA 2132032 24 100.0 39 ........................ ATCAAAAGTCCGCTATGGTCTAACGGTGTAAATAATTCT 2132095 24 100.0 37 ........................ AATTGGATCCCTACGGTTGACGGATCACCGAAAGTGT 2132156 24 100.0 38 ........................ ATCATATTTTGAATTCTCTTATACAGAAATCTTTGATA 2132219 24 100.0 41 ........................ ATAGCTATATATGGAAATGTTCCAGACGCGGAATATGTTGC 2132284 24 100.0 40 ........................ AAGCCTACACAGGATAGGATACTCAAATTATATGAAAATG 2132347 24 100.0 43 ........................ TTTGCGCATTTACTTTTGTATGAGCTAGGCTATTTACATCATG 2132413 24 100.0 37 ........................ CTGAAATATCCTTCAAATTGATTTGCCAATAAATTAA 2132474 24 100.0 38 ........................ TGTTCTGTCGTTACTGTCGTAAAGCACGTCCTATTATG 2132535 24 100.0 38 ........................ ACAGTGCAGAAGTCTAATCCAAATTATTCTACTTTAGC 2132597 24 100.0 39 ........................ TCCTTGGAGATGTTGATGTTTTATACGGTATTATGTGAA 2132660 24 100.0 38 ........................ GCACAATTCGCCAACGATTTCGGTTCGCTTTATACCTT 2132722 24 100.0 41 ........................ CAAATTTCGGCGAAAATTGTACCGAATTTCGGCATTGCTGG 2132787 24 100.0 40 ........................ AAGATCATGGTATTGATATTCAAAAACATTATTCAGAGTG 2132851 24 100.0 43 ........................ ATTAGAAAAGTTTAAGATTACGCATGCAAATATGTTTTTGATG 2132917 24 100.0 39 ........................ TTCTGTTTCGAAGAAAACCCGCCTCAGATTCATTATGGG 2132980 24 100.0 39 ........................ AAATCAAACGGAAACTCCCCGGATATTATCATGTCTAAA 2133043 24 100.0 37 ........................ CCTCATCGTAAACATGCAATCTTGCATATTCAGTGTA 2133104 24 100.0 39 ........................ GCGATATATGTTATAAGAGGAGAAGGGACTTTACCCCCT 2133167 24 100.0 42 ........................ ATATACATCGCCGGTTTTATAGCAACTGCACAGCAACAAATG 2133232 24 100.0 38 ........................ GAAGTTGCAAAAATTGCCAATGTTTTTTTCAAACGCGT 2133294 24 95.8 39 T....................... ATTTATGATGAAAATAGGAAATTTTTCAGAAGAATTATA 2133357 24 100.0 37 ........................ AAAAGTTTAAATACCCGAAGCCACAAAGGTAAAAATA 2133418 24 100.0 40 ........................ CGTTCTAGAGCTAAACGATGCATACGCGGTGGTACAACTA 2133482 24 100.0 41 ........................ ATTCGGGGAAAACTTATGCATTATAAGAAGAAGAGATATTT 2133547 24 100.0 40 ........................ TCAAATAAGGAACAACTCTGGGTAAGCCCACAATACGCAA 2133611 24 100.0 38 ........................ CTTAGCGTCTCAACCTGAACCAAACTTCCTAGATCAAC 2133673 24 100.0 38 ........................ TAAACTAGATCCTTATATTTCACGTAAATGTAAAGGGG 2133735 24 100.0 38 ........................ TAAGGAGTAAGCTAGCACTAGCAATAGCGGTTGCAATA 2133797 24 100.0 39 ........................ GTTCATCAGTTCTACCTTTTGGTCCAAAGGCTGATCCAA 2133860 24 95.8 0 ..G..................... | ========== ====== ====== ====== ======================== ============================================ ================== 126 24 99.9 39 GATAATCTCTTATAGAATTGAAAG # Left flank : GCTTTATCGGAGGCATATAATAGTTCCACCCCCGAAGCTCCTCCTCAATAGGGTCTGAGGCCCTATATGAGTGGAGTCTTCGTAGCTGTCTAACTATCTGCGACCTCACAATATAATAGCAGTTGAAAAATCTAAAAACCGTTTTAAGGAGGGGGGTAAAAGAATTCCCGAATTTACTAGGGATTAACCTAGAATTAAGAAGATCATCTCTATATAAAGATTAATAATTAAACTAGGGAAAAAACTTACTTCATCGTTAAGAGAATAGTCTAGTAATTTTGTATTTTTTGTCCCGTTTTTGTAAGTGGGGGTCGTTTGATGTTAGTTTCTTAGGAGGTAGGGCGTTATCCTCAAATCATTACCTCCATGAAGAATACCTTATCCTCCCGGGCTTAGTAGGGATTGAAAAAACTATAAAAAAATTGAAAACACAAACCAGAGAAAAGCTTATAAATAACTAAGGAGAAAATAAGAAATAGTAAGAGATTAATAAACCCTCA # Right flank : GATCTTGATGATATTCAATGAAGTCCATTAGTACTTCCCCCCAAGGAGGTTGGAGAGAGGGAGAAAAAGAGTCGTTTGAGAGGTTGATAAATAGGATTATGAGGTTGGGAAGGGTTAGAGGGATGAGAGTGATTTTTGCAACGTATAAACCCCAAGATTTAAATGATTTAATGTTAACGTTAACTAACTTAAAGATTGCATTGAGGGTTAAAGAAGACGCTTTAGATAGGATTAACATGAAGGAATAAGCTAAGTTGTTGCAAGCTTCACCACCAGGGTATGGAGCGTTGAGGACTTTCTCGTTAAAGGTGAGAGATCTGATATTCAGAAATGAGAAGTATCAAGATTCATGAAGATTAGATAGATCTTAGTAGTGTTTAGAAGGTAGTATTATTTCTAGTTAAAGTGCCAAGCACTGCCTTAGGTGTAAAATCCCTTCCATCATAGGTCCACACGCTATTTAAACTGTAAGCGTATTCTAAAAACCTCCTTAACAAATT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAATCTCTTATAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: F [matched GATAATCTCTTATAGAATTGAAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0 Confidence: HIGH] # Array family : I-A [Matched known repeat from this family], // Array 4 2539656-2540068 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033241.1 Saccharolobus solfataricus strain SUL120 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ============================================ ================== 2539656 24 100.0 39 ........................ ATACTGCAAGCGAATTGGCGGAAAATTGGCAGCGACGTG 2539719 24 100.0 42 ........................ TTATCTAATTTTAATAATCAAGGAAATTCATTAACTCAAATA 2539785 24 100.0 39 ........................ CCCATTCATCTCTTTCTTTGCAGCTTTGTTCTAACATTA 2539848 24 100.0 41 ........................ TGGTAAATAGCTCTGTTAGGCCCAGTTATTCCATATTCTGA 2539913 24 100.0 44 ........................ ATTTTCTAATATATCTAATTCACTCTGCGTATCATTATGGATAA 2539981 24 100.0 40 ........................ CCCGCCCAGCCAGACTGTTTTCAGCCCAAACCGGCTAATT 2540045 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ============================================ ================== 7 24 100.0 41 GATAATCTACTATAGAATTGAAAG # Left flank : TCCATCATATGTATACATATTTAATAAAAAATTAAAGAAAAATTATAATATTCCACACTTTTTATAATGAATTCCACGTTAGACTGAAAATTGCTATAATTTATTAAGATTAAATTAATAAAATTATTATTTATATTGAAAATTCATATAAGATATTTTATATTTACTAAAAGATTTTTATCATTTGTATTTTCTTATGCTAAAACTATCCCTTTAAAATCCAGTAAAAATACGATTATTAAGAATAGACGAAAATCTTGTAAATGATTACATTTCTCTTAAAGAAAATATAGGGAAAGAGTTCCCCCGTATACAATCGTTGTTTTCCTTATTCGCTAATTCGTTTTGGGCTAGGTTGTTATCCTAAATTCATTATCTTTATGAAGAATTCGTTAAAATCCCGGGAAAACCCGGGAATAGTAAAAAAGAGAACAAAAATAATAATAATACTAATGAAAGAAGGGAGAAGAAAAGATAAAATAGAGGGTTTAAAATCCTAA # Right flank : GAAATTTATCAAGTCGAAGATTGCACTAGAGTCAAAAGGTATCATTTCTTTCTTTCCTTCATTTCTTTAACTCTCCGACTACTTCATCAGTATTGATTTTTACTATCTCTTTAGATGCTAAATCCAATAATCTTCTTGCTTGCTCTTCTTCCTTCTTTCTAACTTCTTCTTCCAAATCCTTTCTTAAAACCTCACTTACATTAATCTTATATTCTTTTGCTTTTTCTAACATTTCTCTCCTAACCTTTGTCGAGGCAGCAACCCGTTCGCCTATAATGACCTTCTTGAATTATAAGGTAATAAATATTCTGTAGTAGAATGTTTTCTACCTTATGCTTTCTAGGCTTAAAATTTAAATTCTTTAGGATGATAGATATTAATTGTGGAATGATTTCGAGGCTTAGACTAACCATAAAAGAAACCTCATAATCTTTGTACATAACGTTTGTTAAACTGTATTTAGCCTTTACATTTCTAGGTTTTTCTGCATGAGTATCTTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAATCTACTATAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: F [matched GATAATCTCTTATAGAATTGAAAG with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0 Confidence: HIGH] # Array family : I-A [Matched known repeat from this family], //