Array 1 138004-135724 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABFMO010000022.1 Veillonella atypica isolate Veillonella_atypica_BgEED38, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 138003 36 100.0 30 .................................... AACTATATAACTGGGGAGATGTTATTATGT 137937 36 100.0 30 .................................... ATTTTGCAAACACACCAATTTCACGAGCGT 137871 36 100.0 30 .................................... TGTTTACGTTCCTCAGATATTCTTCTGTCA 137805 36 100.0 30 .................................... GAACGATATTCTTGTTATCACGTTTCCATT 137739 36 100.0 30 .................................... AGAAATCAAACTTTCTCGTGAGCAACGAAC 137673 36 100.0 30 .................................... AATTTGCCAAGATGAACTATGCTGAACGCT 137607 36 100.0 30 .................................... GAGTGCTTAGAGCCTATGAAAAAGACTGTA 137541 36 100.0 30 .................................... ACTAACCCCTTCGATTAGAGAATAACTCAC 137475 36 100.0 30 .................................... CTGATGATACAAAATTAAAACAATTAATGA 137409 36 100.0 30 .................................... AAAAAGTAAGTCTTGGGAGAAGACTACTCT 137343 36 100.0 30 .................................... GCATCGAATACTGCTTCTTTCCACTCCTCA 137277 36 100.0 30 .................................... TAACGAAGTACCGGTCAAAGAAAAAGAATA 137211 36 100.0 30 .................................... ATCATTAGGCCTTAGCGTATTTAATGCATT 137145 36 100.0 30 .................................... ACAAAAACACATTCTTTTTATCGTTGTAGG 137079 36 100.0 30 .................................... ACAAGAAGATTTGGGCGAAGTAACAGTTAC 137013 36 100.0 30 .................................... AGGTACACCACCCCAAGTTTGACGAACATA 136947 36 100.0 31 .................................... ACCGCATTGACATTACTGCAACTGCAGAAGT 136880 36 100.0 30 .................................... CCAAAAAACTAATTACACTTGATATGTATT 136814 36 100.0 30 .................................... CAATAATCGCCATAATAATGCAAACCATCA 136748 36 100.0 30 .................................... ACGTGCGATTGAAGAACTTAAAGCGGATCC 136682 36 100.0 30 .................................... GTATAAAACCGGAGAAAGTAAACTCGAAAA 136616 36 100.0 30 .................................... CGGGATTAATCGAACTACTTTATACGCATG 136550 36 100.0 30 .................................... CAAGGACAATGATCATATTAATGAGTTCTG 136484 36 100.0 30 .................................... AAAGCTAAACGGCAAGTGGCTATTGAGATT 136418 36 100.0 30 .................................... GAATTATCAACCAACGATAAAGAAACTACT 136352 36 100.0 30 .................................... GATGCTGAACGAGCAAAAGCTATCATTGGC 136286 36 97.2 30 ......................C............. TGGTAGATAACGATATTAACTACCTAAAAG 136220 36 100.0 30 .................................... AATATATCGATGAACGTATCACAATGTGCG 136154 36 100.0 30 .................................... TGGTGTATTTGATGGTAATTATTTAATTAC 136088 36 100.0 30 .................................... TCAGAATGGGTAAGCAGTGATGAAATAAAA 136022 36 97.2 30 ......A............................. CAGTTGGAACGAACTCAAAGGGCGCTTGAC 135956 36 100.0 30 .................................... AATGGTTCTCTTCGTCAGATGTGGGTGCAA 135890 36 91.7 30 .............A...............T.....T TAAACACTTCATTAAATGGTTGTTGATTTA 135824 35 83.3 29 ......C...........CT.......T.-....C. GAAACTTTGTAATGCCCACTTACACAGGT 135760 36 86.1 0 .............A...A........AT.......T | T [135727] ========== ====== ====== ====== ==================================== =============================== ================== 35 36 98.7 30 GTTTGAGAGTAGTGTAATTCTGTAAATCTCTAAAAC # Left flank : AACTAAATTACAAAACCAACTAACAAAAGAAGCTTTATTAATGACTGAAGAAGTGGCAGATATTGTTAATCGGCTTCATGCATTTTATTATTCTTTAGAATTTGGATATCCTTTATCCATTCAACATAAAATGGAAATTGGTACTGCTGAGATTATTAAACTAGGTAGCTTTAATTTCGAGTTTAATCGAAAAGGCGAAGTTATGGACCTTATGTCATATATAGAAGTAGTTGATACATTATTGTCTCCTATGATATATATTATGGTAAATTTAGATTTAATCCTAAATGATGATGAAATAAATGCATTTTATCAAAATATGCTAAGCCGACAATTACGATTAGTTTGTTTAACTACAGGATCTCTTGATAGAGAAAACCTTGATAAAAATCTTATTAATGGGTATATTTTAGATAATGATTTTTGTATTATTTAAAAGAGAAACAGAATTATACCTGGTGGTAGCCCGAGTTACTCTTGAGCCTCAAATTTAATTTGGG # Right flank : TAATCTTCTGTAATTTTCTTCAACCACAAAACGCCCCCTTCACAGCAACCATCTAAGGTTGCTCATGAAGAGGGCGTTTTGCATTGTAGTAAGAAAGTTAGTAAACATTTAGACGGAATCTAAATATGTATATATAAGGCCATACAGCTTACGATAAGAGGGGGGGAAGTAGCATCCAATTTGAGTAGTATTGCATAAAAAGGGGAAATATATTAGGATGCGTCTCTCATAGATATGCAAGGGATATACAGGGGAGATATCTATGGTTGTACAACTATATGGCCGTATATAACGGTATGTAATATAAATTAGAATTTATGAGTAAATCCAGCGTTTACGCCCCAGTCTGCTTGGTAATCACCAGATAGACCAGTGGTAACGTCTGCATATACGCTATTGTTTGTATTGAAACCATAACGGCCACCGAATGCGAGTTCAGTCCAAGTGCCTTTGAGGTCTTGTTCTGTCAATTTTACGGCATTACCGCTAGCATAGGTAGT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAGTAGTGTAATTCTGTAAATCTCTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.60,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //