Array 1 214591-215083 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACICZ010000004.1 Parageobacillus toebii NBRC 107807 strain DSM 14590 Ga0373214_04, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 214591 30 100.0 35 .............................. CAGTCGGACAGGTTGTGTATTGGAACGGTACAGCC 214656 30 100.0 37 .............................. TTTCTACTCAAATAATTGAAGATGAAATCGGGAATCA 214723 30 100.0 35 .............................. CTTGTTCTAAAGTGATTCCCTCATTTTCCAACTCT 214788 30 100.0 35 .............................. CCTCTAAAGATGTATCAGCGTACCGATCGAGGCAT 214853 30 100.0 36 .............................. TCAATTCATTGCTAAAAATCGGATTCCCTCCCGAAC 214919 30 100.0 36 .............................. TGAGAATTGGTGCGGAATGACATATGCGCTGCTACC 214985 30 100.0 38 .............................. TCTTTCAGAATACAATGCAACACCGATTGTTCAGCATT 215053 30 90.0 0 ....A............A...A........ | A [215068] ========== ====== ====== ====== ============================== ====================================== ================== 8 30 98.8 36 GTTTTTATCTTACCTATGAGGGATTGAAAC # Left flank : AACATATGGAACGAATTTTTATTTGCGGTAACGATCACAACGTCTTCCCAGCAGCCCATTATGGTCGCTTTGCAAAACTTATCCGGAAGCCAAATCGTGCAATGGAACGTGCAAATGGCAGGGGCGCTGCTTGCTGCTTTGCCAACATTGCTTGTCTATATGTTCCTCGGCAAATATTTCGTCCGTGGTTTGCTAGCTGGTTCAGTAAAAGGGTAATCATGCATGCCGGCAAAGGCGAAATGTTTGTGGAGGATCTTTTAGGAGCTGGCAGGGAGAAGAACTATTTCGATAATGCCAAAACATCTGCAGTAAGAACTTCCTGTGCCACAATCTTTGTCGTCGACCTCCAATCGTGCAAAAACTCTAGGAGATCGACGACAATTTCTTTTTGCCTCTATCCTTACAGCCATCACCGATCCACTCTATTGACGGAATTTTCAAAATGGATTATACTGGACTTGCTTTGTTTTGAAAAGTGTTGATGTAGCAACGTTTTTGGG # Right flank : CTGAGCAGCAAGGTGCGCATTTTGGGCCAAAGGAAAAACAGGTCGTATCTTATCTATGAAGAATCAAAACTTTATCAATCCACTCTTTTCGGGTACTTATTGAAAAACCGCTCAACACAAAAACCCGCTGATTTTCAGCGGGTTTTATCACTGGCTTGATGCCTTATGGTACAATAAAATCGGAAATCATAGAGACGAAAGCGGGGAGAAATGCGTGTATCTTGGGGCGATTGAAGCAGGTGGAACGAAATTTGTATGCGCTGTCGGGGATCGTGACGGAAATATAAAAGAAAGAGTGACATTTCCAACGGCGACGCCGGAAGAAACGATGCGCCATGTCGTCGATTTTTTTAGCCGATATGAATTAGAGGCGATCGGCATCGGTTCTTTTGGTCCGATTGATTTGCATCCCGATAGTGCGACATATGGCTATATTACAAGCACGCCGAAACAAAAATGGGCGAATTTTAATTTTGTCGGTGAAATGAAACGGCATTTTC # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 57218-57384 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACICZ010000005.1 Parageobacillus toebii NBRC 107807 strain DSM 14590 Ga0373214_05, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 57218 30 100.0 38 .............................. ATGAAGAAGGGTGAAAATTATTCGTCAGTGAACTTGAG 57286 30 96.7 39 .................A............ CTTTTGTGTGAACCAAACGGTCAATCTCACGCAGATTCA 57355 30 86.7 0 .C..................A...GA.... | ========== ====== ====== ====== ============================== ======================================= ================== 3 30 94.5 39 GTTTTTATCTTACCTATGAGGAATTGAAAC # Left flank : ACGAATTTAAAAATGAAGATAGACATCGACATTCATGATACAAAAAATGCATTACCATCAGAAGAATGAAAAACAATTTTGTCGAAGTATCTCTTTGCGGCTGGGAGAATGAGGTCGTTTCTTATCTATATAAATCCAGTTTGAAATTCCGACATGTTTAACCAACACTTGTGTCTATGCTGCTCCTAAACGAGTAAATAAGGAAGCAGATCAATGAATGAATAGTAAGTAGATAAAATATATTTCGTGTTTCCAGATTCATCATCAAAATAGGAAGAAATGTAACGATAGTGCGATCGTATATAAACTATCATTCATGGCGAAAAAATTGTCGTCGACCTCCAATCATGCAAAAAGTGCGGGGGATCGATGACACTTCTTTTTTTTCTTTTCTTCCCTACAGCCATCAGTACTTTTTTGATATTGACGCAATTTTCAAACTGACGTATACTGTATGTATCCATTATTCGCCATCCTTGATATATTAGCATTTGTTGTGG # Right flank : CCAAGCTAAAAAAGGTTCTATTATTGTTTTTATCGTAATTATGAAATTGAACCAGCGTTCCAACGTGATATAATGAATTGGTAACTATTTATTTTTATCGCGCCTACGAGTAATTGCGTAGTGTTCCGGCAGCTTTCCCTGCACCATGTCAATATCACGTTCTAACCGATAGGCGCATTCTCGTTTCTCTCTAGCATAATGCTAGTGGAGAAACGAGTTTTTTTTATTGCACTTTTATTGTGTGCATGTTCTAATAGTGATTGATGGGAATTAGGAAGGGATTCATTTCATTGGCAGAGGATATATTCGAAGCAAGGAGTGGGGGCTGATGGAGAAAGAGGCGATCATCCGCTTTGAGCGGGTGACGAAGGAATACGATGGGTTAGTCGTGCTCGATGATGTCAGTTTTGAGATTGAGCGCGGGAAGTTTTATACCTTACTCGGGCCGTCGGGATGCGGGAAGACGACGATTCTGCGTTTGATCGCGGGGTTTACGGAGC # Questionable array : NO Score: 6.89 # Score Detail : 1:0, 2:3, 3:3, 4:0.72, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //