Array 1 45400-49272 **** Predicted by CRISPRDetect 2.4 *** >NZ_VWTV01000013.1 Aeromonas veronii strain A34 contig00013, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 45400 28 100.0 33 ............................ TGCGTTGAACCCGCGAGCCAGTAGGTTGTTCCC 45461 28 100.0 33 ............................ TCAAAGAGAGGAATGAGCCGTGATTACAACTAG 45522 28 100.0 33 ............................ CATTGCGGATGCTCTTATCAAGGATTCTGGCAA 45583 28 100.0 33 ............................ CCATACTGATTCCACGGAAGCTGGAGAGGCTGC 45644 28 100.0 33 ............................ CGTGCTAGAAATCGTAAAGATTCTAAGCTGCGT 45705 28 100.0 33 ............................ TACTACGGCATTGAAGGGGCTGGCCACGCTGTC 45766 28 100.0 33 ............................ CAGCGGGGACATCTCCCCGTTGGGGAGACCGGG 45827 28 100.0 33 ............................ CAGGGTCAGGGAAAATATGAGGGTAGGGGTAAG 45888 28 100.0 33 ............................ CATGGCATCATCCAGACGCCACCCTGTTACTGT 45949 28 100.0 33 ............................ TCCTGGCCATAGTGGTGGAGCAACGCTCGGCCC 46010 28 100.0 33 ............................ CAGTACGAAACGCTGGAGGATGGCACGATAAGG 46071 28 100.0 33 ............................ TGTAACTCGCCCCATCCTACTGAGCATGCGAAG 46132 28 100.0 34 ............................ CAAGGAGGAAACATGGACGATTTGAGCTTGAGCG 46194 28 100.0 33 ............................ TTTACCCTTGCATTCTAACTCTTCCATCGTCTC 46255 28 100.0 33 ............................ TGAGTGGATCTCATTAAGATTCACTCACCTTGC 46316 28 100.0 33 ............................ TAATGCACCGCTACGACCGAGCCATCATGCAAG 46377 28 100.0 33 ............................ CGGCTTGAAGGAACCCCTCGGCAGTGACCTGGA 46438 28 100.0 33 ............................ TTGGTGAGCAGCCTGAGTATCAGCCGCCCGAGC 46499 28 100.0 33 ............................ TCTGGATATCACCTCCCCCATCGATCCGGATAC 46560 28 100.0 33 ............................ TCTGTTATCAGATTTCCAAGCGTCCACACGGGC 46621 28 100.0 33 ............................ CTGGCTGATCGTCTCGGTGACCCTGATGGAATC 46682 28 100.0 33 ............................ TAGCCCTCCGTGAGCTTGGTAAGCGTTCAGAAA 46743 28 100.0 33 ............................ CTCTTGCCCGATACGGGTGTCATTGTGATTCAT 46804 28 100.0 33 ............................ CTCGGTGATGAGTGTCGTGACGTCTTCGGCGTT 46865 28 100.0 33 ............................ CAGTCTGGGCTGTCAGGCAATGGCACCTATAGC 46926 28 100.0 33 ............................ TGTTGCATCTATTGGCTATGCCACTGCATACAA 46987 28 100.0 33 ............................ TAGCGTGACTGTCTGAACACGAATCGATACCCG 47048 28 100.0 33 ............................ CATGCTGTCAGCCACCTCACGGCGCATTGCATC 47109 28 100.0 33 ............................ CATCTATCCATGAGACATTGGTTCGATTGGAGA 47170 28 100.0 33 ............................ TCACGTCTCTCACCATGTTGGAAGGCAGCACGG 47231 28 100.0 33 ............................ CACACACCTTATCAATGCCCATCATTTTCTCCT 47292 28 100.0 33 ............................ TTCAGCCCTCAGGACTACTACAGCCACGTGACC 47353 28 100.0 33 ............................ CGGTGCCTATCTCGCGTAGGGATGAATTCGAGG 47414 28 100.0 33 ............................ CGCAGGGTTTGACGTCTACGTGCATGAGTGGTG 47475 28 100.0 33 ............................ TTCTCTCATTTCAGCAATTTCCAATGGTGCTGG 47536 28 100.0 33 ............................ TACATCCTTAGCATTGTGTGCAACAAGCGCTTG 47597 28 100.0 33 ............................ CCATATACGTCAGAGGCCAGCACAGACGGTAGC 47658 28 100.0 33 ............................ CCCTGTTGTGGTTTTTGATATCCCGATCATATT 47719 28 100.0 33 ............................ TCCCATGGGTGAGTTCGCCACCCTGACTCGCCT 47780 28 100.0 33 ............................ CGACGCTATCCACTGTGGATACGGCACGTTGAA 47841 28 100.0 33 ............................ CTGGCCGCCTCTCGGCGTCTCAGTGTCGCCAAG 47902 28 100.0 34 ............................ CGCACAGAGACAATTTTGGGTGCAGAAGAACCCA 47964 28 100.0 33 ............................ TCGTATATTGCGGCAATAACCCTGACGTGGTAA 48025 28 100.0 33 ............................ TGTGCCACAGAAGCAGTACGACCTGTATATCGA 48086 28 100.0 33 ............................ CTAATATCGACACGGGCGAGGAGTTCCATTTTG 48147 28 100.0 33 ............................ CTTGACCATATGGAGCTTAGCCGTAAGCATGGC 48208 28 100.0 33 ............................ CCAGGTGGCGGGCACCTTCGTTGACCCGATCAC 48269 28 100.0 33 ............................ CGACCCGTCCGCACTTATTTGTGGGCAAACATC 48330 28 100.0 33 ............................ CAGCGTGGCCAGCACCATCACCCCGCAGAGGTT 48391 28 100.0 33 ............................ CTACGGTCACACCAGCGTGCCGCCAGAGGGGTC 48452 28 100.0 33 ............................ CCCCATCGACCCCGCCACGCTCGACGACTTTTT 48513 28 100.0 33 ............................ TCGGTGCGGATGGATAACCTCTACACCGCTGGA 48574 28 100.0 33 ............................ CAACTTTGACGCACGTAACTTCGAAAGATGTCA 48635 28 100.0 33 ............................ TCAGGTGGGGGGCAGACATCCGCCCCCGTGTGA 48696 28 100.0 33 ............................ CCAGTCGTGCTCTGTTCGCCTAAAGCCTACGAG 48757 28 100.0 33 ............................ CGACCCCCCACTGAACTTCTCTCCTGTGTACGA 48818 28 100.0 33 ............................ TATAGCGGGTCCTTGAGCGTGGCATATGTAGTC 48879 28 100.0 33 ............................ CTACTATGGAGCCGTGTTGTGGTCAAACGCCAA 48940 28 100.0 33 ............................ TTGGCAGCCAGGGTCATTTGCATGCACCTTGCA 49001 28 96.4 33 ..........T................. CGAGCTGGACAGCCTCAAGGCCAGCCTGCTGCA 49062 28 96.4 33 .................A.......... TATCGCCGCCGTTATTCAGGCGACCGGCGCCGG 49123 28 96.4 33 ....G....................... TATCTCCGAGGTGGCAAAAACCAGTGCAGATGC 49184 28 96.4 33 ...........A................ CCATGCTGATAACCATCACCAGCCTACCAACCA 49245 28 71.4 0 .C...............A..A.CC.GCG | ========== ====== ====== ====== ============================ ================================== ================== 64 28 99.3 33 GTCTTCCCCACGCCCGTGGGGGTGTTTC # Left flank : GAACCTCTGCATCGATCTCGCCTTTTCCCTGACGCGTGAGATGGCGGGGCGTTATGAGAAGGCTCTGGTTTCATCCCGCTTTCGAGAGCGAGTGATAGAGCTGGATCTGCTGACTCGTTTGGCACGAGATATTCCGCAGTTATTGGGAGGGGCAAGTACTGATGCTGATAGTACTGGCTAATGATTTACCCCCTGCGGTACGAGGACGAATGAAGCTCTGGTTCATCGAGCCGAGGCCCAACGTCTTTGTATCTGGCATTAAAGACTCGGTCGCTGACACAGTGATCGAATACCTCTGCCAACACTGTTCACCGGCAGCTGGTGTGGTGATATTCAAGAGCATCGCCAAAACACCGGGCTATCAGATCCGTACCATAGGCTCACCGACCAAGACGATCTGTGAGATAAACGGCCTGCAGTTGGTGGTAGAAAAGCTACTCGACCAGTAAGCCAACCACAATCTATAGCTGGCTTGGCGCGATCTTTAACAATATATTGGT # Right flank : GTAACAAATATATCTGGGGAGGTTGTATATCTCTGTAGCAGTAATTGACTGACCTTAACTCAAGGCACAACAAACCAATTTCCCAACATCTGCGTATTCCGGTGAAGTTGAACAGTGATTCCGGAATCTGTGAACACCATTTCCGGAAAGTATGCGGACAGGGATTCTTCGAGCAGAAACTGAGCTTTGAGGGGAGGCATCTTTTCGACTCACCGAACAAGCCAGCAGCCAAGCGCAGCGCGGCAGTTGTGGATCCAAAACGTTGGAACAGGACGGTTCATCTGACATCAGAGTACGTGCACTGAAGTGTCCGGAATCGGTGTACACGCAAGCCGGAATCAGCGTTCATTTTCGACCGGAATATGCAAGGGTTACCTCTGCTAATATAATATATCGAACCATGACCGAATTTGATCGGGAAGAGGCTGGCAAATGGTTAGCCGCTCAACCCTGGGTGCTCTCATATCAGGTAGCCCCGCTAAGCGATGCCTGGTATGGCC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCCCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //