Array 1 1474842-1471182 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065061.1 Streptococcus equi subsp. zooepidemicus strain SEZ33 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1474841 32 100.0 35 ................................ TTGATGAAATGTATGAAAATCGTTTTAAAGCGGTA 1474774 32 100.0 33 ................................ TGTTTCGTTACAGGTTAATGTCAATAAACAAAT 1474709 32 100.0 33 ................................ TAAAGAAACTCAGACATGGACTAATAAGCTTTT 1474644 32 100.0 34 ................................ TAATTACAAGTACAGATATGTTAAAAAAAGCTCT 1474578 32 100.0 34 ................................ ATAGACTGTTCAAGAGAGATGTCGTCTGCCTCTT 1474512 32 100.0 34 ................................ AATTGGGCAAGATAATTCAAAATCTAACTCATCA 1474446 32 100.0 33 ................................ AGGCTCTCTTAACTTAGATAAAGCCCCCCCAAC 1474381 32 100.0 33 ................................ ATTTAGCAATCCTCCATTATTTGCCTAACTTAA 1474316 32 100.0 33 ................................ CATTAAAAATAACATCTGGATTTGAGGACCAAT 1474251 32 100.0 34 ................................ TCCCGTACAAGCTCGCCGCCCCATTGGCCTATAA 1474185 32 100.0 34 ................................ TTTTTTGTTTGCTCCTTATATATTATGGAAAAAG 1474119 32 100.0 35 ................................ AGACTACAACAGGAGCAATTACGACTCACTGGAAG 1474052 32 100.0 35 ................................ AAAGTAAGTTACAGATTGTCAAAAATAAATTAACA 1473985 32 100.0 35 ................................ TTCTACGGATACAAATTTAAAGTTTTCAGCTCCCC 1473918 32 100.0 35 ................................ ATCTTCTGTCTCAATCAGATACCTAGCATAACGAA 1473851 32 100.0 34 ................................ TTGGAGTGTTTTCCACGACTGCATGTCGACCTTA 1473785 32 100.0 33 ................................ TTGAAGGAATCTCTCGAAATTAGCAAGGCTTCA 1473720 32 100.0 34 ................................ TAAAATATTGTCGATTAAGATGATTTCGGCCCCG 1473654 32 100.0 33 ................................ GGTTGTCGCAAAGTTGTTACCTAAAGCAACAAC 1473589 32 100.0 34 ................................ TGAGATAATATTTCTTAGACAATCTTGTTGGATA 1473523 32 100.0 34 ................................ TTGAGATACTTGTGTTTGAGCGACAACCTGTTTA 1473457 32 100.0 34 ................................ ATAGTGGGATGATCTTGATTAGCCTGTGGTCGCT 1473391 32 100.0 34 ................................ TTGTTAACTGGCCATCAAAGCGTTCCGTCAAACT 1473325 32 100.0 35 ................................ AGCAACATCAATATACCTGGGCATACTTTAATAAT 1473258 32 100.0 35 ................................ AAAGTCTTCTTGCAGCATAATAAATTGCTTATTAG 1473191 32 100.0 34 ................................ ATTTTGTATCGTCCTACAAAGACATTGACCGAGT 1473125 32 100.0 34 ................................ TAATAGGAGGTACTGAATGGGAATGAAGGAATAT 1473059 32 100.0 34 ................................ ATCAAGTCTAACCGAGCATCTGTCAAGCGAGCAT 1472993 32 100.0 34 ................................ ATGAGGATGTTTTGGTATTTTACAAGAAACTTCC 1472927 32 100.0 33 ................................ CTCAATCAACTGGATAAGCAGCTCCGCATAATC 1472862 32 100.0 35 ................................ TGCACCGATGGCTTCAACGTCAACGATACCATCTT 1472795 32 100.0 36 ................................ TTTAAAGCCGTCGGCAATCAGCTGAATTTCCAGCTC 1472727 32 100.0 36 ................................ GTTTAACAAATCTAAATCCCAAGTTGCAATCTCACC 1472659 32 100.0 34 ................................ TTTAATCTCCTCTGCGATTTTAAAATATACCCAT 1472593 32 100.0 33 ................................ AATCAATTTAACAAAAGGTTATTTTTGTGACTT 1472528 32 100.0 36 ................................ TCGAAGGATTTTCTTTGATGATATCTAGGTCAACAG 1472460 32 100.0 34 ................................ TTCCTGATATGCCAAAAGGTACTAAGGTCTTACG 1472394 32 100.0 34 ................................ TGTTTTCGTACATTTTAATAGCTGGTAAAGAATA 1472328 32 100.0 33 ................................ AGCAATGAGTCAATGTTAGATTTTTTAACTAAG 1472263 32 100.0 35 ................................ TCATGTTGTGTTAGAGCTTTTGCATAATGTTCTAG 1472196 32 100.0 34 ................................ AGGGTCATTTTAGCTTCTACTTTACGCATGCTAG 1472130 32 100.0 34 ................................ ACACTATCCATAAGGTTAGGTACAATCTGTTGCG 1472064 32 100.0 35 ................................ TTTTAGTCGACTATAAAACTTTTAGTAAAGCCCCA 1471997 32 100.0 33 ................................ TTGTTTAGGACAGAATAGGTATTGCTGCTCTGA 1471932 32 100.0 33 ................................ AAAATGAGTTGTTCGCAAGTGTTTCTTTCTGCT 1471867 32 100.0 34 ................................ TATTGAGTGCTAAAAAGGAGATAATTAATGGCAA 1471801 32 100.0 34 ................................ CTTGGGGTTATGGTTATAAGACCCCGCACTATTG 1471735 32 100.0 33 ................................ TTGTTGTTTTAAATATTGAATCTCATTTTCCGT 1471670 32 100.0 33 ................................ ACAACGAGTGAATGACCATCGATAGCTTCATCC 1471605 32 100.0 33 ................................ TATGTGTCAGGCTATTTCTTGTATTATTACTTA 1471540 32 100.0 34 ................................ ATCAAGAGCTTTTAACTGTGCATTAGATAGCCTA 1471474 32 100.0 34 ................................ TCAAAGCAGATGATGGTGTCTTTTGTAAACGATA 1471408 32 100.0 33 ................................ TAAGATGATGAATCGTGCAGGTTCATCTTTTTG 1471343 32 100.0 34 ................................ TGACAACAATGTGCAAAACACAATAACTTGACCT 1471277 32 90.6 32 .....................T........TA TGCGATACGTGACTTTACGATGTTGCGACTCC 1471213 32 68.8 0 ........C..TG....T.C.T..T.C.T.T. | ========== ====== ====== ====== ================================ ==================================== ================== 56 32 99.3 34 GTCTCGCCTTTCATGGGCGAGCGGATTGAAAT # Left flank : AAGGCTATTCGAGGGGATATTGATAGTTACCCACCTTTTATGATTTAGGAGACTGGTTGATGATGGTATTGGTTACCTATGATGTGAATACAGAAACAGCAGCAGGGCGAAAACGACTACGTCAGGTAGCAAAGTTATGTGTTGATTATGGCCAGCGTGTGCAGCATTCAGTATTTGAGTGCTCGGTAACACCTGCTGAATTTGTTGAGATCAAGCATAAGCTGACGACGATTATTGATACGGAAGTGGATAGTATTCGTTTTTACTTGTTAGGAAAGCACTGGCAAAATCGTGTCGAGACGCTAGGGCATTCTGATAGCTATGATCCTGATATAGGTGTCCTACTTCTGTAAAAGGAGCGAGTGCGAGCCTGGATCACTCATAAAATGCTGGGAGGCTCGCGCTAAAATAAGCTAAAAAATGGAGAAATGAGGGGTTATAGCTGAATATGTTAGTAGCTAGCCTATATCATTTCTCTATAAACTGTGCTATATTGCGCA # Right flank : CTTTGTTTTTCATGAAGGGGTAAATCATATTGTATTCATCAAGCTGATTTATGCTTTTTATGGTGCTATGTCAAATAGATAAAAACCAATCTGAGGTTGTTGAACAGGATTGGTTTTTTCTTGTGATTGCAGATCAGACTTTTCAAAAGAACAAGCACATTATCTCAGCTAGACTGGTGCTTGATAGCTCCTGAGCCCTTGTTTGCTGTAGTTGATAGGACTTTGCTGATGGCCTAGTCAGGCATATCGTATCAAATTCAAGTTTTTTCATGTCACTGTCTATAGTTTGTCCGCCCTACTTTAGGTAGAATAGAGGTAACTTAAGAGAGGAGTTTATTATGGAATTAACGATGCTTTTGATGGTTTCAGTTTTCATTGCAGGGCTGTTATCATTCTTTTCCCCTTGTATCTTTCCAGTTCTGCCGGTGTATTTAGGCATTTTGTTAGATTCTGATGATTCTAGGTCTATTACTATTTTTGGCAAGAAACTATATTGGTAC # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCGCCTTTCATGGGCGAGCGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.80,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA //