Array 1 7030-11545 **** Predicted by CRISPRDetect 2.4 *** >NZ_PDBT02000007.1 Neisseria sp. N95_16 NODE_7_length_49388_cov_70.0178_ID_13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ======================================= ================== 7030 33 100.0 33 ................................. GGGCTTCGTTGATGGCATCTTGACAGGCTGAAC 7096 33 97.0 33 ................................T TATCGGCATCCCACTTTGCACCAAATTGCTTTG 7162 33 100.0 34 ................................. CGCAAACAGGCAGAAGCACGCGCCCTGTTAAATG 7229 33 100.0 39 ................................. AGCGCGGTTTTCACGCCGGTAGCGGTGAGCGCGCCGGAT 7301 33 100.0 33 ................................. AGCCGTGCTGTTATTAAAGGTTGGAATGTATGA 7367 33 100.0 35 ................................. TGCTTTCTTGCGCCCAAACGGAATACAGCATATGC 7435 33 100.0 34 ................................. TGGCCTGTCGCTACGTCAACTGTATTGGCCGCGT 7502 33 100.0 33 ................................. ATCGGTCAGCAATATTTGCACCGCGTTGAAGAG 7568 33 100.0 35 ................................. CGCCCTTTGTGAAGTGGCTGGCCATGATAAGCCAA 7636 33 100.0 33 ................................. TCTCCCCAAAATGCTGGCTCTGGTAAAACCAAC 7702 33 97.0 33 ................................G CCAAACAAATGATACTGAACCAGTTTTAACAGC 7768 33 100.0 34 ................................. TATTTCCGCCGAAAGCTGCATTAAAATCAGCCAA 7835 33 100.0 33 ................................. TAAAGACCGCCTGTTTACGCTGATTAGTCGTCC 7901 33 100.0 33 ................................. GCTTCAACCAATCCAGCAACCCGTTAGCTGCTT 7967 33 100.0 35 ................................. ATTCAGCCAAGCTAACCGATTTAACGCTTGAACCC 8035 33 100.0 34 ................................. CGATGAACAAAACCAATGCGGCCGCCTTCTACCT 8102 33 100.0 34 ................................. TCTTAGAAGATTTGATTGCAAAACCCTTGTCAGC 8169 33 97.0 34 ................................T GTTGACGGCTCGAAAAAACCGGCTGCAGCTATTG 8236 33 97.0 34 ................................T CATTTGGTGGGTTGCAAAGGAGCAGGGGAGCCGC 8303 33 100.0 34 ................................. TCTTCCGGCGGCAATTCTTCGCCGTCGTCTTGTC 8370 33 100.0 33 ................................. TCCATGCCGTCTAAATCAAAATCGTCGTTTTCC 8436 33 100.0 33 ................................. TCAAAATACGGCACGCCTTTTTCTGTGTCGTAG 8502 33 100.0 34 ................................. ATTCCGAGACCTACGTGCAAAAGCAGGGACTGAC 8569 33 97.0 32 ................................G ATTTGAGCGGCGCGAAGCACGTTATCGGGTGG 8634 33 97.0 34 ................................C ATCAGTTCACCGCCATGCATTTGTTGTAACGGTC 8701 33 97.0 33 ................................T TCTCATCTTGCCCTTTAATTTGAATCATGACCT 8767 33 97.0 33 ................................T GCTGAAGAAGTTCGAGCGCGTTTGGCGTCTGAT 8833 33 97.0 33 ................................G CCAGCCAGCATGGAAGCGTGTGGATTTGCTGAA 8899 33 100.0 35 ................................. CCGGTTGATTCAGCCCATTTTTTAGCGGCCGTAGA 8967 33 100.0 36 ................................. TTGATGATGTTCATCAGAATAAACGGCGCTTTCGGC 9036 33 97.0 34 ................................T TCGTCCGTGCCGACTTCTTCAACAGCCTCTTCAT 9103 33 100.0 37 ................................. TTCACACGGCTTACATAGTCAATTTTTGCTTCACCGG 9173 33 97.0 34 ................................T ATAAGACGTGGCGTGCGCTTGAATATGGTGATGT 9240 33 97.0 35 ................................G GGGACACCATCGAAGAGGCCATCACAAACGCACAG 9308 33 97.0 32 ................................C ACTTCAATCAGGCGAACTTCCTGAAAATGCAC 9373 33 100.0 33 ................................. TTTGTCAGCGGAATATATCGGGCATTGTCGGCA 9439 33 100.0 32 ................................. CAATTGATGAGCGGAAGAGCCTCATTTGGCGA 9504 33 97.0 38 ................................T TCGTTCCAAATCCACCCTTCGCCGCCAAGGCATCACGC 9575 33 97.0 34 ................................T TCGTCGTAGGCTTCTTGGCGCTTATACCAGTCGT 9642 33 100.0 33 ................................. TTGTCAATGTGTTTTTTAAAATGCGAGAAGATC 9708 33 100.0 34 ................................. CTTTCGGGCATTAAGACGGATATGTCGTCTATTT 9775 33 100.0 35 ................................. GCACCTGATGTTTGCTTGTATGTTGAAAGTCACAC 9843 33 100.0 32 ................................. GCCGTGATGCAGAAATCCGTTATTTACCCGAT 9908 33 100.0 34 ................................. GGAAGTTCGCCTGATTGAAGTGGAATACACTAAA 9975 33 97.0 35 ................................C AATCCTTTGTCTTTGAAAGGGTTGTAAATAGAAAA 10043 33 97.0 32 ................................C ATATAAACAGCGCAATATCGCAAAGCAATTTG 10108 33 97.0 35 ................................G AACATGAGCTTGTCGGCATCGCTTAAGCCAATGGC 10176 33 97.0 34 ................................G CTCCAGTCGGTATAACCTGTTGTCAGGTAAAGGA 10243 33 100.0 33 ................................. ACGTGCCGTCAGTGTCATTTGCAAACACCTTTT 10309 33 100.0 33 ................................. TTTGTCAGCGGAATATATCGGGCATTGTCGGCA 10375 33 97.0 33 ................................C TCCGCCCACTCATCTTGCTTCTCTGCAATCGTG 10441 33 100.0 34 ................................. AATCCTTTGGGCTTGTCCGGTGCACTCCCTGCAT 10508 33 97.0 33 ................................T TGCCCAGCAGGGATATACCACGTTTTCTTATCG 10574 33 100.0 34 ................................. CGCTGGAAATATCGCGGCTGCAAAATCCGCACAT 10641 33 100.0 34 ................................. GATACAGGGTGTTTTTAATGCGCTCTACGCGGCC 10708 33 100.0 34 ................................. GCTTCATAGCTTTCCTTTCATGAAATGGGTCTGC 10775 33 97.0 33 ................................C TTGATGAATATTTGCCGTCGTCTCTTCCAGGTC 10841 33 100.0 33 ................................. GCAACAATCAAAAAGGATTTCAACAACTCACAG 10907 33 100.0 33 ................................. AAGTGCCTGACTTCGTGGCAGAATTAGAAACTC 10973 33 100.0 36 ................................. AATTTGTATGTATCGCTTCCGTCCTGCTTGGTGCGC 11042 33 100.0 38 ................................. CACTAGACGAATATCGTTCAGGCGGTTTTTTTGACCGT 11113 33 97.0 36 ................................G GCTTGGTTGTGCTGGCCGGTTTGGTTGTGTTTTTTA 11182 33 100.0 34 ................................. ATAAGTCTGCATAACTCTCAGGCGTGTTACTCAC 11249 33 97.0 34 ................................C TGTATAGGTGTCGATTCTTCTGTTATTCGAGCTT 11316 33 100.0 32 ................................. AAATGAAACTCGAAGACGGCACCGAAGTAGAC 11381 33 100.0 33 ................................. ATGACTTTTTCATATAAACGCTTAGGCGTAACA 11447 33 97.0 33 ................................T TGTTTGAAAACGCAGTGGGTTAATCATTAAAGG 11513 33 78.8 0 T.............A.A.......A.....GTT | ========== ====== ====== ====== ================================= ======================================= ================== 68 33 98.6 34 CCAGCCACCTTCGGGTGGCTGTGTGTTGAAACA # Left flank : TCAATAGGGGAAAGATTAATGTTAATGCTGATTACTTACGATATTTCATTGGAAGATGCGCAAGGCCAAGCCAGATTGCGGCGAATCGCCAAACACTGCCAAGATTACGGCGTGCGCGTGCAATTTTCGGTATTCGAATGCGACATTACCCCCGATCAATGGGTCGTGCTCAAAGACAAACTGCTCAAAACCTACAACCCCGAAACAGACAGCTTACGCTTTTACCATTTGGGCAGCAAATGGCGCAGAAAAGTCGAACATCACGGCGCCAAACCGGCGGTGGATATTTTCCAAGATACATTGATTATCTGAATCGCTGACCACTGGTTCTCATGAAATCATCAGGAAGTTAGCGATTGAGAAATGTTCTTTAAAAATGAGGACTTATTTTTGATTAATGCCTTTTGCAGGAGTGTGCTATAATTTTTTCGGCTCTCTTGAATAACGCTAGCGAATCAGTGCATTATCTGCCTTGATTGGTAAGGATTGTACAAGGGGCT # Right flank : TATCCAGTAACGGCGAAAAACCAAGCAGAATAAGTCAAGCACTCCCGATACCCCTAGAGGAATTAAATCCCTATTAAAAAGCCTCGTATCATGAGGCCTTTTTATTATCGAGTTAATCTAAGTTTGAACTAAGTTAAAGTATGCTAAAAAAATCATGCCGTCTGAACGTGATTTTGGTATATGATTTAGGAATGAATGCCATTTGATTTCAGGAGAAAAATCCATGTTCCAATTTGCCCATCCCCAACAAACTCCGCTGCGCCAAGCGGTGACTGAGGCTTATCGCCGCGATGAAGTCGAAGCGGTGAACGATATGCTGCAACAGGCGCAGATGACGGGTGAAGAGCGTCGTGCTGCCGATGATTTGGCGCGCCGTTTGGTGACGCAGGTGCGGGCGAGCCGTACCAAAGCCAGCGGTGTGGATGCGTTGATGCACGAGTTTTCATTGTCGAGCGAAGAGGGTGTGGCGTTAATGTGTTTGGCGGAGGCTTTGTTGCGCA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAGCCACCTTCGGGTGGCTGTGTGTTGAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCAGCCACCTTCGGGTGGCTGTGTGTTGAAACA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.30,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //