Array 1 34667-32592 **** Predicted by CRISPRDetect 2.4 *** >NZ_PNRB01000016.1 Lactobacillus amylovorus strain PMRA1 PMRA1_0016, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 34666 30 100.0 36 .............................. CACTCGATGATTGCCGCTAAGTATTCATTTTGAAAA 34600 30 100.0 36 .............................. TAAAAATAAAAAGTTGATCCACTTAGCTTGTGTCTG 34534 30 100.0 37 .............................. TGCATTAATTGTAACATTTTTGCGTCGTTCTCTTTAG 34467 30 100.0 36 .............................. CTGGACTAAGCATAAAACTACTTCTGTTGATGGCAC 34401 30 100.0 35 .............................. AATTGACAGTGCTTTATCGACCAGAGACACTCAAA 34336 30 100.0 36 .............................. TGTTCATGAAGGGCGGCTGGGAACAATTTTATAATT 34270 30 100.0 36 .............................. ACTCAACCAACTACTGATAACCAAGCAACTGGTAAG 34204 30 100.0 36 .............................. GAATATATGCCAGACTTTAATGATAAAGTTCTGTAC 34138 30 100.0 35 .............................. TTGGATGTTGATGAAACTGATATGGTGGTTTCAAT 34073 30 100.0 36 .............................. ATGTTGAAAGTGGCCACAGAACTCGTAACCACAAGA 34007 30 100.0 36 .............................. ATGTTGAACCGCAAACTCAATCTTAACCTGCATCAC 33941 30 100.0 36 .............................. AATTTAATTAAGGCACGAAATTTATTAGCGATTGAT 33875 30 100.0 36 .............................. CCTAGGACAAGACGAAGGCTATTCGGCTGAGAGATA 33809 30 100.0 37 .............................. TGATTTAAGCCTCCTTCTTTTCAACGGTGTAAAGTCC 33742 30 100.0 35 .............................. TGATTATTAGTAAATGGGGTCCAAAACTTGTCTAG 33677 30 100.0 35 .............................. ACGTTCAAGTTAAATATTACAGAAGGGCAAATTTA 33612 30 100.0 37 .............................. CCGTTTGCGACAGCTTTCCTCAATGATGACTTGATTG 33545 30 100.0 37 .............................. GCGTTACTTGCATCAATTACTAAGTTATTTACAGTTA 33478 30 100.0 35 .............................. ACGCAATGTATGTTTCAAATATGTTGGAATATGAA 33413 30 100.0 36 .............................. CGAAATGTTTAGCAAGCTTTACGCCGAAAAGGTCAA 33347 30 100.0 36 .............................. CGGGGTCGGTAGCATTCGAGGGCTTACCGCTTTCGG 33281 30 100.0 35 .............................. GCGTAAAACTATAGACTACTGGGTCGGCTTAGCTC 33216 30 100.0 36 .............................. CCACACATAGCCGCTATAAATATTCCAAGCAGCACC 33150 30 100.0 37 .............................. TACGATGATGAAGTTGAGGACGAAAAGGATAAATTAG 33083 30 100.0 36 .............................. TTGAAATAGGTTCATTAGTTTTCTTACAATATTTCG 33017 30 100.0 35 .............................. CGGGATAAGCGTCCTAAGACGTTGTGGGAACTTGC 32952 30 100.0 35 .............................. TGTTCTGTTTCTGAATCAATGTCGTCAAGATTGCC 32887 30 100.0 36 .............................. GTGTTTTCATCTGTGATAGCCAGCTCACGGCTGATG 32821 30 100.0 37 .............................. TCATCTACTATGATCGCACCTGAATCTTTATTCTCAG 32754 30 100.0 37 .............................. TAAGTATATACATCGATAGTCCCTTGCTTTTGTTTGG 32687 30 100.0 36 .............................. AAAGCCGAATTTTACACCAACTTTACTAAATATGCT 32621 30 76.7 0 .A......C...........G..AA...TA | ========== ====== ====== ====== ============================== ===================================== ================== 32 30 99.3 36 GTTTTTATTTAACTTAAGAGAAATGTAAAT # Left flank : CCTATGAGCCTTATGTTATGGGATGGTAATAGATATGTATGTGATTCTGGTTTACGATATCGTAATGGATAAACAAGGTGCTAAAGTAAGTAGACATGTTTTCAAAATATGTAAAAAGTATTTAACTCATGTTCAAAATTCAGTATTCGAAGGTGAATTAACCAAGTCCCAGCTTGAAAGCTTGAAGAATGAGTTGGATAGATGGATTCGACAGAACGTTGATTCAGTGATTATATTCAAAAATAGAAATAAAGATTGGCTTGATAAAGAATTTATGGGTCAGGATTTAACTGATTTAACGTCGGATATATTCTAAAGAAGAATCTGTCGATGTAAGATACGAAGAAAATCCTGGGAGATCGACAGTTTTGCAAAATGCCGGTACAATGATATTTGTGCGATTTGTCTAATGATTTTAGTGATTTTTGGATGAGTTTTTGGTTAGGTCGACAGATAGGGCCGTTGAATCTGTTGATACAGTAGGACTGGTAGTTGCAACT # Right flank : GTGTGATTAAAGTCAATTAAATATAAAACATAAAGATTTATATTTAATTTACGGGAAGGAAACTACAATCAAACATCCTACTAAAATCCTACCAATTAAACTGGTAAAATAGATAAGTAAGTATAGAGAACAATTTTTATAAAAGGGGAATAAAATGGCAGATAAAAAATTACTTCTAATCGATGGTAACTCTGTAGCTTTCAGAGCCTTTTACGCTCTTTATCGTCAACTAGAATCTTTCAAGAGTCCGGACGGCCTGCACACTAATGCCATTTACGCTTTTAAGAACATGCTCGATGTCCTTTTAAAAGACGTTGATCCAACCCACGTATTGGTAGCTTTTGATGCAGGAAAAGTAACTTTTAGAACAAAAATGTATGATGAATATAAGGGTGGACGTGCAAAAACTCCAGAAGAGTTGCTCGAACAAATGCCTTACATTCAAGAAATGCTGCATGACTTGGGTATTAAAACTTATGAACTGAAGAATTATGAAGCAG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATTTAACTTAAGAGAAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //