Array 1 1602839-1602116 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL501404.1 Oscillochloris trichoides DG-6 OSCTscaffold_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 1602838 36 91.9 39 ..A-....C............................ CGCAGGCGGCGGCCATCGATCACACCCGTCCAGTGCTCG 1602763 37 97.3 40 .....................T............... CGGTAGGCGGCGGCCAGCGATCACACCCGTCCAGTGCTCG 1602686 37 97.3 39 ...........T......................... CTGTGTTCCAAAGGTATGTACAACGTAGCATTGTAGCCA 1602610 37 100.0 40 ..................................... TAGTCCTAAAGATTCGACAGCATTTATAGCGAAAGTTTCC 1602533 37 100.0 41 ..................................... CCTCCTTTTCCGGCTGTACTATACGAACCAGGAATCGCGCA 1602455 37 100.0 40 ..................................... TCAGGCGGCAGGACTTGGTAGCGTTCTTTAGTGGCAGTGG 1602378 37 100.0 39 ..................................... TCGGAAATGGGCCATCCGAATCAGCGCACGCCCACGCCA 1602302 37 100.0 38 ..................................... GCGAAGAACACCCGGAAGGGGAGTTCCATCACCAACCC 1602227 37 100.0 39 ..................................... TCCGCTTCGTCTTGGACTGCGGCGGTCTCGGCGAACTTG 1602151 36 86.5 0 T..............................T-..GT | ========== ====== ====== ====== ===================================== ========================================= ================== 10 37 97.3 40 CACCACAAAACCGCCCCGTTACGCAGGGGATGATGAC # Left flank : ATACGGTCTATGACATTTTGTCTTATCTCGCGGCGGGGATGACAATTTCAGAAATCCTTGATGATTTTCCTGATCTCACCACCGATGATATTCGTGCGTGCTTGAGTTTTGCTGCCAACCGTGAAGCACAGGTCTTGGTGGTTCGTGTATGAAGTTATTATTTGACCATCATCTGTCGCGGAAATTGGTGCGGCGACTTGAGGATTGCTTTCCTGAAAGTAGCCATGTCGCCTATCATGGACTGGACGACGCTGATGATTTCGTCATCTGGAGTTTTGCACAAGCTAATGGCTTTACTATTGTCACAAAAGACTTAGACTTTAATGATTTGAGTGCATTACGTGGCGCTCCACCAAAAATTATCTGGATTCGGATTGGCAACTGTACAACCAATACGGTTGAGCAGGTAGTCCGTACCTATGCTACGGCGATTGAGCAATTCGTTACTCTTTCCTCAGATAGCCTGCTCGAAATCATCCCGCAACCACAGAAGTAGCCAG # Right flank : ACTATCTGGTAATCCCTATAGGATATGGTGTTTACCAATTCTCAAACATTATTCTATACTAAGGAGTGAAACATGAAGCCAAATTATGTACTTATTGATTATGAAAATGTTCAGCCAACAAATGTTCAAATGCTTAACCAAGATCACTTCAATGTCATGATATTTCTTGGTGCTAACCAGACAAAAATACCATACGAAATCGTTATGGTTTTTCAGGAAATGGGAAGTCGTGCAAGATATATTAAAATATCTAGCGTCGGATCAAATGCTCTTGATTTTCATATTGCATTCTATATTGGTCAATTAACAAAAGAATACCCAGAAGCTTATTTTCATATCATTTCAAATGATACAGGCTTCGATCCTCTCATACAACATCTGCGTGACCGAAAGATATTCATAACGAGATCTAAAGATATAATGGATATGCCAATTTTCCGAACATCAATACTACCAATAGTAGAAGTTGAAACAAAAATAACAACAAAAACACCTGATAT # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CACCACAAAACCGCCCCGTTACGCAGGGGATGATGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-8.00,-8.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [5-5] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 2 1606991-1605587 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL501404.1 Oscillochloris trichoides DG-6 OSCTscaffold_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 1606990 37 100.0 37 ..................................... TCCGCGTAGGCGTTGCCTTCGCCGTTGGGCGTGCTGC 1606916 37 100.0 39 ..................................... ACCATTACCGCTGGCTTGACGCGGGTAACCTACTCTTCT 1606840 37 100.0 39 ..................................... CTCAGGTAGAGTGTGCGGTCTTTGCCGCCCTTGGTGGTC 1606764 37 100.0 37 ..................................... TGGGATCTCGATTGCCGTTGTCAGCCGATCTAATAGT 1606690 37 100.0 41 ..................................... GCGGAGCAGTACGAAGCATACCTGGCAGAACACCAAGAGGT 1606612 37 100.0 37 ..................................... TCACCAGCAGCCAATCTAACCACGGCGTATCGGCTAT 1606538 37 100.0 39 ..................................... TCGTGCAGTCTCTCGATGTTCGTAATGGTTGGTGTTCAA 1606462 37 100.0 35 ..................................... CTACAATCGCCCCGACTGGGTCTTGGAGATGTGAT 1606390 37 100.0 41 ..................................... CTGTGCTTAAATTATCGAAGTCAATGCAGCTTGGTGTTACG 1606312 37 100.0 40 ..................................... TGACCGATACTAAGCCTAAAAGACAGCCGAAATCTACGGC 1606235 37 100.0 37 ..................................... GAACCCTCAGCGACGGTACGCGCACATGGCGCAATGT 1606161 37 100.0 42 ..................................... CGAACTGGCCGTGACTCAGGCGGGCCTTCACGTCAATGAGGC 1606082 37 100.0 36 ..................................... GTAAACGTGCATGGCCCCTGGACGCCCACCCGCCCC 1606009 37 100.0 43 ..................................... TCGCTTCCATGCGGTATCCAGTTCGTACCACCCGTTGCCCAGT 1605929 37 100.0 39 ..................................... CTGGATGCCCTTCGCATGCCCCGCGCCTGACGGAGTCGG 1605853 37 97.3 41 .G................................... ATAGTCAGCCCATGTCTCCCCTCGAATGGGCGCAGGCAACC 1605775 37 97.3 40 .G................................... ATACGTAATAATGTTTGTACGGAGGAGGCACTATGACTAG 1605698 37 100.0 38 ..................................... CGACGAGTACCCCGTTGGTGCTGCCGCCAACGGGCCAA 1605623 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =========================================== ================== 19 37 99.7 39 CACCACAAAACCGCCCCGTTACGCAGGGGATGATGAC # Left flank : GCGGCAAACTGATCGAAGGGTATGTCGCACCACAAAACCGCCCCGTTACGCAGGGGATGATGACAGGCTACCACCTGGAACCACTCGGTATCCTCTTGCTTGCACCACAAAACCGCCCCGTTACGCAGGGGATGATGACCGTTTACCTTATGCGCCTCGCGGCGCATGCCCTCAATATCGCACCACAAAACCGCCCCGTTACGCAGGGGATGATGACAGTCGGCTAGTAGCGATGACGTTGCCCGCACGCTTGTTATCACCACAAAACCGCCCCGTTACGCAGGGGATGATGACGCCTATAGTAAAGACCTGAACAGCAGCCCCAGCAATCGCTCACCACAAAACCGCCCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCAATCGCTCACACAAAACCGCCCCGTTACGCAGGGGATGATGACTAGCCTTCGCGGAAGATCCTCTTCGGGTGTTACGCGGCA # Right flank : CCTAATACATATCCGACGCTAGGATGCCGGTGGGACGGGGGGATGTTCAGGATTCTCGAAGGAGTTTCAGCAAAATCGTCAATAATGCACGCTGCTGCTCAAGCAAGGTTTGTTGTTCTCTCAGGAGGCTTGCATGTTGCTGCTGCGCATCCTCCTGAAGCTTAATCAGAAGCCGTAACTCTTCAAGCAGGGAAGTCTCTTCTCGATGACGTATGGCGTTCAGGCGATAGGCAATGAGTGGAGGGCGATTTAAGCGCAGGCGGCGAATAGTAAAGGCACCCTTGGCGGTAATCGGATAGAGCGTGCCATCGGCAAGCGCGAGTATATGCTGATCTCGTTGCTCATTGCGCGGATTCCAGAGCGAGAGATCGGTCGGATATAGAGGCCAATAATCAGACTTGTATTGATTGCAGCGGCTACAACAGTAGATGAGGTTCTGGAGATCATCAATGGAACCACCGTGTCGTGGTGGTTGGTAATGGTCAATCGTTAATTCACCT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CACCACAAAACCGCCCCGTTACGCAGGGGATGATGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-8.00,-8.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [45.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 3 1609909-1607197 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL501404.1 Oscillochloris trichoides DG-6 OSCTscaffold_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================= ================== 1609908 37 100.0 39 ..................................... CTCATCTACGAGGGGCACACCCTGCACCTTCACTGGTAT 1609832 37 100.0 40 ..................................... GAAACATTTAGAAAGGTATAATCATGGCAACTATGGGTGT 1609755 37 100.0 41 ..................................... TGCTGCTGCTTGACGAGAGTGTCAATTTCCTGACAGATCCG 1609677 37 100.0 40 ..................................... TGGACGATTCGCAATACCCCATCCGCAAACACATCATCGG 1609600 37 100.0 39 ..................................... TCATACAAAAAAATCCTCTGCCCACATAAATTCGATCCC 1609524 37 97.3 40 .G................................... CCGGATGCCCCGATCCCGATCCGCAGCCCATGCGGATCAA 1609447 37 97.3 40 .G................................... TGAACTCGGCCTGGGTGGTTACTCGGACGATCTCGATTTC 1609370 37 100.0 41 ..................................... CCCTCTACCCGCACGAGTCGCGGGTCGAGGCTGAGATCGGC 1609292 37 100.0 38 ..................................... CGTCAGGTACCGCCCGGTGAATGATCGGTCATTCGTGC 1609217 37 100.0 39 ..................................... GATCTGCTTCCGCTCCCCCTTCGGCATGAGGCGCTTCAG 1609141 37 100.0 38 ..................................... AGCATCAAGGCCGTTTTTCCGTGACTGGGGCGTCCTCC 1609066 37 100.0 37 ..................................... TCGCTGGCTGATAACCCATGCTGACCCAGAGATCTGG 1608992 37 100.0 39 ..................................... TCGTCGGCATCGTACCAGTCAGACAGCGCCACCACTTCG 1608916 37 100.0 37 ..................................... GGCCCAGCGCCGGTGAGTATGGCAGCCACCGGCTCAT 1608842 37 100.0 41 ..................................... TCTGCTGTATGTGCAGTGGACGCGGTTTAAGCAGAAGATGA 1608764 37 100.0 36 ..................................... CTAGTCATGGTATTACACTCCTTTAGAAAATAACCC 1608691 37 100.0 42 ..................................... ACCGTAATCATCTGCGTATGCACGTACACATACTATATCTAT 1608612 37 100.0 38 ..................................... TTGCTGACATCAACCAGATGTGCCCCGTTCGAGAGCAT 1608537 37 100.0 38 ..................................... CTGCAAAGCGTGCCGCTGCTGCCACCACCGATGGGGAT 1608462 37 100.0 41 ..................................... TTCCAGCGTTGGTTCTGGGCTAGTGGAAAGCTCCACAGCCC 1608384 37 100.0 38 ..................................... TCGCCGCTGCGCCCAGACGTTGGCCGCGAGCAATCAGC 1608309 36 97.3 36 ....................-................ ATGGACGGAACTAGACCCGCCATGGGCGAGTCCAGC 1608237 37 100.0 42 ..................................... TCACATGTTTCTTCTACTCCGTTGGTAATCTGAGAGAATGAT 1608158 37 100.0 39 ..................................... GTATGGGCTCTGCGCACATTTCTTTGAGGCTATTACTAG 1608082 37 100.0 40 ..................................... GTAATCTTATAGACGGGTATGCGGTAGTGGGTACTTGCCC 1608005 37 97.3 38 ...............................A..... TTCCTGGGCTGGAGCTTCCACATCGGCGGTGGGAGCGG 1607930 37 100.0 38 ..................................... TCGTACAGGATGTCGGGGATTGCGGTTGTTGTCATTGG 1607855 37 100.0 42 ..................................... TCGAACCGCTGCGCCAACTGCGAGGCAATGTAGTCGCCGGAG 1607776 37 100.0 39 ..................................... CCATATTCGTTCATATCAGCGACCGTCTCGCTGTCAAAC 1607700 37 100.0 39 ..................................... CTACGTCCACCAAAACACAACCGGCGTCAAGATCCTCAT 1607624 37 100.0 42 ..................................... ACGTTGTGCATGGTTGGTGATACGTCCCGCGACTCGTAGGCA 1607545 37 100.0 45 ..................................... TCACCCGTACCACCAGCGGCGGCAAACTGATCGAAGGGTATGTCG 1607463 37 100.0 38 ..................................... AGGCTACCACCTGGAACCACTCGGTATCCTCTTGCTTG 1607388 37 100.0 41 ..................................... CGTTTACCTTATGCGCCTCGCGGCGCATGCCCTCAATATCG 1607310 37 100.0 40 ..................................... AGTCGGCTAGTAGCGATGACGTTGCCCGCACGCTTGTTAT 1607233 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================= ================== 36 37 99.7 39 CACCACAAAACCGCCCCGTTACGCAGGGGATGATGAC # Left flank : ACACCACAAAACCGCCCCGTTACGCAGGGGATGATGACCCAACCGAGCGCATCCCTGTCGGCGCACGGCACATGCATTTCACCACAAAACCGCCCCGTTACGCAGGGGATGATGACCTCCAAAGGCTGTCGCGGGCGATCTCGATTTCCGATCCCACCACAAAACCGCCCCGTTACGCAGGGGATGATGACTCAGGTTGGTGAGGAGGCACTGAACCTCCTCGACGCTCCCACCACAAAACCGCCCCGTTACGCAGGGGATGATGACGCAAAGGCACGAAACTGCGCGATGGCGTCATGGTACTGGCGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGGTCTTGGAGGATGGCATTACGGAGGATGGCATTAC # Right flank : GCCTATAGTAAAGACCTGAACAGCAGCCCCAGCAATCGCTCACCACAAAACCGCCCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCAATCGCTCACACAAAACCGCCCCGTTACGCAGGGGATGATGACTAGCCTTCGCGGAAGATCCTCTTCGGGTGTTACGCGGCACACCACAAAACCGCCCCGTTACGCAGGGGATGATGACTCCGCGTAGGCGTTGCCTTCGCCGTTGGGCGTGCTGCCACCACAAAACCGCCCCGTTACGCAGGGGATGATGACACCATTACCGCTGGCTTGACGCGGGTAACCTACTCTTCTCACCACAAAACCGCCCCGTTACGCAGGGGATGATGACCTCAGGTAGAGTGTGCGGTCTTTGCCGCCCTTGGTGGTCCACCACAAAACCGCCCCGTTACGCAGGGGATGATGACTGGGATCTCGATTGCCGTTGTCAGCCGATCT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CACCACAAAACCGCCCCGTTACGCAGGGGATGATGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-8.00,-8.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 4 1614179-1610142 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL501404.1 Oscillochloris trichoides DG-6 OSCTscaffold_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 1614178 37 100.0 39 ..................................... TCTACACTCCACATAAGGTGGGGAGGGTGGACTATCTCA 1614102 37 100.0 39 ..................................... CCTTTTCCTCTTTAGGCACTGATGCACGTCCCTTACACT 1614026 37 100.0 41 ..................................... TGGAATGATTCCAGAACACATTACCGCCCCCAGTATTGTCC 1613948 37 100.0 40 ..................................... CCGCGCTGGTACGAGGCTGTGTTGCGTGCGGCGACCTTGA 1613871 37 100.0 44 ..................................... TTGGTATTGCGAGCCATGCTCTTTCCATCTCCTCTTGACCGTAG 1613790 37 100.0 42 ..................................... ACGGCTCTACTCCCTATAGGATCTAGGGGCATATCATACTGT 1613711 37 100.0 41 ..................................... CCAAAACTCTTGGGCTTCTTCCCAAGCCGTAAACATTGGCC 1613633 37 100.0 42 ..................................... ACAACTGTGTTTCCACGCTTGATTGTAGCTATGTAGCCGTCT 1613554 37 100.0 38 ..................................... GCGATTACTTTGTCTGCTGTTCGTAGCGATTCCCTTAC 1613479 37 100.0 40 ..................................... TCACGTGGGAACGTCACGATCTGCCCATCTGCGTTCTTAG 1613402 37 100.0 35 ..................................... TTCAATCTCCCCGTCCCACACGACGCGAATGCTGT 1613330 37 100.0 38 ..................................... GGTACTTGCCATAGTATTCAGTATAGAAGTTATGCTAA 1613255 37 100.0 41 ..................................... CCCTCCGTTCCGCCCGCGAGATCGCCAAGCTGGCGACACCT 1613177 37 100.0 34 ..................................... TTGCCGTCCGCGCTCGAAATGAATGACTCAAGAG 1613106 37 100.0 37 ..................................... GTCAACGCCTCGCGGATCATGGCCCCGCTGGGCTTCC 1613032 37 100.0 40 ..................................... GTCATAGAAAAATCCACGTCCGGTGGCTGGATGCTCGTGC 1612955 37 100.0 42 ..................................... TTGCTGGCGTGACCACAAGCCATATTGGGCTGCCTGTTTACC 1612876 37 100.0 41 ..................................... TAATCACATCGCGGTACAAAGAGAACGGGTACTGCTATTAT 1612798 37 100.0 40 ..................................... TTCGTATGGAACACTATCAGGATTGCTGTGAAAGTGTTGA 1612721 37 100.0 39 ..................................... TATTGATGAATACATCTAAACTCGTTGCATCATTTGCAT 1612645 37 100.0 41 ..................................... TTAAGTAGTGTTTTTGCGAATATGGTATCAACCGCTGGTGG 1612567 37 100.0 38 ..................................... TTAGATCAGCAGCGATTGACCGTCAGGGCGCGGCGTGA 1612492 37 100.0 40 ..................................... GCGGTTGTGGGCGCGAGGCCGTCGCCGGAGTAGCCCCGGC 1612415 37 100.0 41 ..................................... GTTTGGGTCATTCCGCATGATCATACTCTCCTTGTCATCAC 1612337 37 100.0 41 ..................................... CAGAGATCGGGCGGCGAAACATCGGGCGCTATCCGCACTCA 1612259 37 100.0 40 ..................................... TGGACAGGATGAGTTCTATCAGTCCCACCCCCACCCACAA 1612182 37 100.0 40 ..................................... ATAGTATAGCTTCTTGGTATAGCTTGCCTTTTGGCCCGTT 1612105 37 100.0 39 ..................................... CCTGGGCATTGGTTGTAGCATTACATACCGGGGCGTTAA 1612029 37 100.0 39 ..................................... GGCTGGCAGCGGGTCTTTATGCGCAGTACGCCCAGGAGC 1611953 37 100.0 42 ..................................... ATGTATTAAGATTTATTATCCTCTACTTGGAAACAGGTAGAG 1611874 37 100.0 41 ..................................... CCAACACCCCCTGACGGGGAATCCCCACTAACGGACAGCTT 1611796 37 100.0 44 ..................................... CGATGTGCTGTGCGCATTCAGTCGTCTTGCACTCGATCTGGTCG 1611715 37 100.0 43 ..................................... CCTCGCTGCACTCATGGCGCACTATGGCGCACGCACCGACGCC 1611635 37 100.0 39 ..................................... ATACAGGCATCGCATACCCGATCAGCCCCTCGATTTCGC 1611559 37 100.0 40 ..................................... ACCAAGGATGCGAACACCAGGGCGAACATGATCCTTGTGA 1611482 37 100.0 41 ..................................... AGGTTACTTGTCTACGCACTCCATTAACCATACTATTGTAA 1611404 37 100.0 41 ..................................... ACCCAACCCTCGCCCTCCACAAACTGTGCGTAATCCTTCCA 1611326 37 100.0 40 ..................................... TCGTGTGGTAGTTTTGAACACGAAGAACCGCATTCTTAAA 1611249 37 100.0 41 ..................................... TCATGATGTTTACTCCTGTTCGATGCGGTTCTTATGTTGGT 1611171 37 100.0 38 ..................................... GGTACGCCTTGCCACGCTCGCGCAAACCACGCAGATGA 1611096 37 100.0 40 ..................................... CACGATCCGCACTTTGCCATCTCCGCCCATCTGGGCGTAC 1611019 37 100.0 40 ..................................... CCAGAAGAGCGCTCTACGATCATACGTCCACTTGCGCCGA 1610942 37 100.0 44 ..................................... TGGTTCCAACCTCATCGAGTGTGTGGATTGACCCGCTCAGGCCA 1610861 37 100.0 38 ..................................... CCCAAGTTGGCTGGATTAACGCCGTACCGGAACGCCAA 1610786 37 100.0 35 ..................................... TTTCTCTGCTGCGGTTTCTATCGTTTCTGTTTCCA 1610714 37 100.0 40 ..................................... CAGTCCCGTGCGGGTGCGCTGGGTTGACGAAACCCCATCG 1610637 37 100.0 38 ..................................... CGCCCACGAGACGACCCCTTGCTCTTTGAGTTTGTCGG 1610562 37 100.0 44 ..................................... TTCATGGTATGGTTAACACACCATACCCACGCGCCCAAAATCTG 1610481 37 100.0 37 ..................................... CCAGCGGCAGCGGCGATCTCAGCGAACTGGATAACGA 1610407 37 100.0 41 ..................................... CCAACCGAGCGCATCCCTGTCGGCGCACGGCACATGCATTT 1610329 37 100.0 38 ..................................... CTCCAAAGGCTGTCGCGGGCGATCTCGATTTCCGATCC 1610254 37 100.0 39 ..................................... TCAGGTTGGTGAGGAGGCACTGAACCTCCTCGACGCTCC 1610178 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================ ================== 53 37 100.0 40 CACCACAAAACCGCCCCGTTACGCAGGGGATGATGAC # Left flank : TCGCATCGGGGGAGTGCATCGGTATTATCGACCAGCACCACAAAACCGCCCCGTTACGCAGGGGATGATGACCTACTAACCTTAATACGGATAGTCGAGCATTATAAGGGCACCACAAAACCGCCCCGTTACGCAGGGGATGATGACAAAGTCGCCGAAGTAATTCATTCGGGTTCGAGTCCCGATACCACCACAAAACCGCCCCGTTACGCAGGGGATGATGACGACATAGTGTTTGTATTAGCTATGGAACGTCCTCTATTTATACCACCACAAAACCGCCCCGTTACGCAGGGGATGATGACAGAACGATCACACCACACTGGTTACACTGCCCAGCCTGAGCCCACCACAAAACCGCCCCGTTACGCAGGGGATGATGACCCATCAAGATAGTTAATGCCTGACGTGGCCATTCATGCCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGGTAGGCGGTGACGATGTACTTAGTTGGTTC # Right flank : GCAAAGGCACGAAACTGCGCGATGGCGTCATGGTACTGGCGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGGTCTTGGAGGATGGCATTACGGAGGATGGCATTACCACCACAAAACCGCCCCGTTACGCAGGGGATGATGACCTCATCTACGAGGGGCACACCCTGCACCTTCACTGGTATCACCACAAAACCGCCCCGTTACGCAGGGGATGATGACGAAACATTTAGAAAGGTATAATCATGGCAACTATGGGTGTCACCACAAAACCGCCCCGTTACGCAGGGGATGATGACTGCTGCTGCTTGACGAGAGTGTCAATTTCCTGACAGATCCGCACCACAAAACCGCCCCGTTACGCAGGGGATGATGA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CACCACAAAACCGCCCCGTTACGCAGGGGATGATGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-8.00,-8.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [28.3-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 5 1616576-1614295 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL501404.1 Oscillochloris trichoides DG-6 OSCTscaffold_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================= ================== 1616575 37 100.0 41 ..................................... GCCGCGCCAGCCGCGTCGGGTGCTGGCCCAGGAACAGCCCC 1616497 37 100.0 40 ..................................... ACACAAGGCATTACCGTTAGTGGCCCACCAACCCTTTTGG 1616420 37 100.0 38 ..................................... TTAACGTCCTTGATGGCGTAGCCATCAAACCGAATGCC 1616345 37 100.0 39 ..................................... TCGTAGACGCTGCGGCGTTGTAGGCGATGCCGGTGATAA 1616269 37 100.0 39 ..................................... GCAAAGGCCATAATGCTCTGGTTTGGGTCGCCAACGGCA 1616193 37 100.0 40 ..................................... TGCGTGTAGCGCCGTACCCGGTGCTTCCAGACCGGGTGAA 1616116 37 100.0 43 ..................................... TCATGTCCGGGTATGTCAGCAGCATGTTTGCCAACCTGATTAC 1616036 37 100.0 37 ..................................... CCAAAATTTCTTATCCGCGTTGATGTGTTTCATGTCC 1615962 37 100.0 43 ..................................... GTAGTGATTACTGATACTCGGGTTCGTCTGCCCGTTCTTCAGG 1615882 37 100.0 39 ..................................... TCCCGCCACCCGCGACCGCACGCACCATGTGACGCGGGA 1615806 37 100.0 36 ..................................... CGAGGTCATCAACGAACTCATGGCCTATGGCGGTAC 1615733 37 100.0 40 ..................................... TCAAACTTCTTGGGCCATACGCGATCCCGACTAAACCCGA 1615656 37 100.0 44 ..................................... CTGCCCATGTCACAGCAGCGGAGATAGATTCGCGTGACTCGCGC 1615575 37 100.0 36 ..................................... TTAGAATCTTCCATAGTCTTAGTTTCACCGTTAGAG 1615502 37 100.0 41 ..................................... GGATTAATTCACAGACGATCACGGCGCGCTCATCCCGTACT 1615424 37 100.0 42 ..................................... CCATCGTGCAGCCGTTTAAGTCTTCGGGCAGTGATGATGTGG 1615345 37 100.0 41 ..................................... CCCATTCCCAGGGCAAACCAAGAAGCTGCAACGTTATCGAG 1615267 37 100.0 39 ..................................... TCGTCAAGGATTTGCTTGGCGCGACGGGCGTTGCGTTCG 1615191 37 100.0 41 ..................................... ACCAACACCTCACAAGATTGCCCGCTCTGTAACAGTTTGAG 1615113 37 100.0 42 ..................................... CGTGCCGTTACGAAACAGCAGTAAGCGTTGGAGGTACGCCTC 1615034 37 100.0 39 ..................................... TAAATAGCCTTGAATTAGATGCATATTCCATATAAATCT 1614958 37 100.0 39 ..................................... TCACGTCAGTTGACTCGACAAAACTCAGCCCATTGCTGG 1614882 37 100.0 42 ..................................... TAATGGTTCGGTGTACCATCTTGTATAGGGTCGTCTCGCTCG 1614803 37 100.0 45 ..................................... GCTGTTGTGTGCCGTGACTCGACCGCCTGCCGGGATGTTCCATCC 1614721 37 100.0 41 ..................................... TGCAGGTCGCATCGGGGGAGTGCATCGGTATTATCGACCAG 1614643 37 100.0 38 ..................................... CTACTAACCTTAATACGGATAGTCGAGCATTATAAGGG 1614568 37 100.0 41 ..................................... AAAGTCGCCGAAGTAATTCATTCGGGTTCGAGTCCCGATAC 1614490 37 100.0 43 ..................................... GACATAGTGTTTGTATTAGCTATGGAACGTCCTCTATTTATAC 1614410 37 100.0 42 ..................................... AGAACGATCACACCACACTGGTTACACTGCCCAGCCTGAGCC 1614331 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================= ================== 30 37 100.0 40 CACCACAAAACCGCCCCGTTACGCAGGGGATGATGAC # Left flank : AAGCGCGGCGGCTCGTCCGCGCCATCCAAGGCAGCACCCCCTACGAACCATTCATCGCCCGTTGAAGAGGGAAGCGATGCTCTACCTCATCACCTACGACATCGCCATAGACAAACGGCGCACCAAACTCGCCAAACTGCTCGAAGGCCATGGACAGCGCGTACAATACAGCGTCTTCGAGTGCGATCTGAACACCAAACAGATCAACCAACTCAACCGCCGTCTCAAGCGACTCCTCCGCCCCGACGAAGGCGACAACCTCCGCATCTACCAACTCTGTAGCCAATGTCGCAGCAGCATCAGCATCATCGGCAACGGCCCACCAGTAGAACAGGCGAGCGATGTCTACATCATCTAGCGCACAACATGCCGCGCAGCGCATCAGAACGGGCAAAAACAGCCCATCGAACCAACCACACCACCCCATCAAGCGGCCAAAAAACACCAACCGCGCAAACCGTCTGTACAACAGCGTCCTAATGCCCTATAATGAAGCCGCT # Right flank : CCATCAAGATAGTTAATGCCTGACGTGGCCATTCATGCCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGGTAGGCGGTGACGATGTACTTAGTTGGTTCCACCACAAAACCGCCCCGTTACGCAGGGGATGATGACTCTACACTCCACATAAGGTGGGGAGGGTGGACTATCTCACACCACAAAACCGCCCCGTTACGCAGGGGATGATGACCCTTTTCCTCTTTAGGCACTGATGCACGTCCCTTACACTCACCACAAAACCGCCCCGTTACGCAGGGGATGATGACTGGAATGATTCCAGAACACATTACCGCCCCCAGTATTGTCCCACCACAAAACCGCCCCGTTACGCAGGGGATGATGACCCGCGCTGGTACGAGGCTGTGTTGCGTGCGGCGACCTTGACACCACAAAACCGCCCCGTTACGCAGGGGATGATGACTTGGTATTGCGAGCCATGCTCTTTCCATCTCCTCTTGACC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CACCACAAAACCGCCCCGTTACGCAGGGGATGATGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-8.00,-8.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [35.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 1 18971-17379 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL501401.1 Oscillochloris trichoides DG-6 OSCTscaffold_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 18970 37 100.0 38 ..................................... GATTATTACACATTTTTTTCTCCTTTCTGGAGAAAGTT 18895 37 100.0 38 ..................................... CCTTATCAGGAGACGATTCCCCGTCGCAAACGGGGCAC 18820 37 100.0 37 ..................................... ATTCCCCGTCACAAACCGGACACTGGGTCTGGACTTC 18746 37 100.0 37 ..................................... AAAAACTAAGCAGTTTTGCCACATCCTACGCAAACCC 18672 37 100.0 37 ..................................... GAATAGTTACCCAACCCCCGCTACATTCCGGATTCGA 18598 37 100.0 35 ..................................... ATACCAAATAGATTTCATTTTGTGCCAACAAAAAA 18526 37 100.0 37 ..................................... TCTCCCCCATGTTTTTTCTCCTTTCTTGGAGAAATTG 18452 37 100.0 37 ..................................... TAGGTGCTGCCAGCTGAGCGGCGGCCATGGTAACAAC 18378 37 100.0 35 ..................................... CCGCATCCGACCATCATCATCACCCCCACCATCAG 18306 37 100.0 38 ..................................... TTTTTCTCCTTTCTTGGAGAAATTTACCAACGGCACCA 18231 37 100.0 37 ..................................... AAAATGTAGCAACCGGAACCTCCCTCATTATGAGGGA 18157 37 100.0 39 ..................................... GAAACAAAACATGAAAATCATTTTACCGCCACACGAACA 18081 37 97.3 34 ....................................T AGAAAGTTGACCAACGGCACAACGCCGTCGGATT 18010 37 100.0 43 ..................................... ACTTCCCCGATTCTTTTTCCCGGACCCTCCACAGGTCCAACAT 17930 37 100.0 37 ..................................... CGGAACCTCCCTCACTTGAGGGAGATACACTCCCCAA 17856 37 100.0 37 ..................................... ATTAGCACTAACACAAAAGTGACTGATATTACTTTTT 17782 37 100.0 36 ..................................... CATACTGCCGGGGGTTTGGAAAAAATAAAGGTCCGA 17709 37 100.0 37 ..................................... GATGTTGATGGGGCTGCGGACGTTGCCCCGACCGCCC 17635 37 94.6 37 .....T..............................T GTGATCGGCGCCGCGTTGCGGTCGTCGTTCAGGACGT 17561 37 97.3 37 .....T............................... ACGCGCCGCTGGAACTCCGTGAAGTTGTCCACGTACT 17487 37 97.3 35 .....T............................... AAACAGCTGCGGCGGGGGTGCCGCAGCTGCGCCCA 17415 37 94.6 0 .....T..............................T | ========== ====== ====== ====== ===================================== =========================================== ================== 22 37 99.1 37 GTGCTGAGATCCGCCCCGAAATGAAGGGGTTTGAAAC # Left flank : GGGGAGCAGCCATCCCAGCAACACCAAACGTTCACTGACCGTGCGCGCCACCGGGTCTTTGGCCAACTGCGACCATGAGCGCAGCGGCCCAAAGCGCAGCGCCAAGGCGGCAGGCCGCATCCCCGCGTGCAGATCGCGCAACACGTGCAGTGCCGCCTGCTCATCTGCTGCAAGTGTTTGATAGACTGCCCGTACCGTAGCCTGACGACATAATGCCTGACGCAAACGCAGCACACGTTCTTCTGGCGTACACTGATGGGGTAGTGAAATACGCTGATAGCGTGCAATCGTCTGCTGCGCAATAACCGGCAGATCGGCCAGCATCCGTGCCCAATGATTCATGGTTGCCCCCCAACAAAAGACCTGCTATACTACGCTTGACATGGGGAGTATGCGCATATTTGGCCAAAAACGCAACCCTGCGGAGTCTCGCTGGTCAATGGCAAACCCGATTTCAGCCATCAAGAAGCGCCAAACCCGCATAGCCCTCGGACAATACG # Right flank : GCCGGGAGGGGAGTCCCCAGAGGCGTTCTTACGCCCAAAGGTAGCACCGACTACCCGCCGTTGGCTTCGACAAGCTCAGCCAACGGGTTGCCAATGCCGCAAACATCGCTGGCTGAGCTTGTCGAAGCCAATGCGAGGAGGGTATGGAGACGGCTACGGTGCCGTGCAAGACTCTACCTCGCTATGCTGATTTAGGCCGCCGTGTGCGCAGCAAGATGATCCCCAGCCAGATGAACCATACAATTTGCAGGAGTCCGAATACGACTATGCTTTCCCGGAGCGGCGGAAGGTTCGAGACCAGCCCCACCATCCCGGTCGTTAGCCCGAACCAGTTCAGCGCCTTGGGCAGCCGGATCGACTGGAGACCAGCCACGCTCACCAGGAGTACCCATGCTCCACCAAGTACTTCACCGCCCGCTCCGCCTAACCCGTTCACGATTGACTCGATCACCTGCCATGCCGCAACCGCGCCGCCCATGTCATGCACCTGAAGGTTGACA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTGAGATCCGCCCCGAAATGAAGGGGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.90,-9.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA // Array 2 278975-301556 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL501401.1 Oscillochloris trichoides DG-6 OSCTscaffold_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 278975 37 100.0 41 ..................................... TGCGTTGGTTGCGCTCGCAGGTTGCCCCTGCGGTAGCACGG 279053 37 100.0 38 ..................................... CGCGAACACCGAGACCGTGCCCCCGACGGAACTCGTCA 279128 37 100.0 36 ..................................... AAGAGGAAGCAACGCTAGGTTGTAGTGTTCGCTATT 279201 37 100.0 36 ..................................... TGGGATCGGCTGAGCCGGGCGTGACTGAGGACTATC 279274 37 100.0 34 ..................................... CTGTACCCCACGCTCACCGCCTGCTCCTGCTCCT 279345 37 100.0 34 ..................................... ACGACTACTTCACCGCCACACCTCCACCCCACGA 279416 37 100.0 39 ..................................... ATACCGATGGCCAGCCGGGCTACCCCGCGCTGCTCTTCG 279492 37 100.0 36 ..................................... ATCAATGGGCTAATCGCCGAGTTTGACCTGAAAAGC 279565 37 100.0 36 ..................................... CGTGAAAACCTGCCATACTGTAGCCAAGGCTTGAAC 279638 37 100.0 38 ..................................... GGCATTAGATCAACCCCACGATTGTGATATGCCACCGT 279713 37 100.0 36 ..................................... CGTTGATGATGCCGATACGGCGTGGCATGCAGGGGA 279786 37 100.0 37 ..................................... GTCAACCGATCCGCGATGCACAGATCGGCGCGTGGGG 279860 37 100.0 36 ..................................... GTACTGCCGCCGCACTGATGCCTTTGATCTCGGCAT 279933 37 100.0 35 ..................................... TACACGCTACATATAGACAAGGCGGAATGATGGAA 280005 37 100.0 33 ..................................... TTGCTTGATCGGCGACGATCTCATCGCGAAACG 280075 37 100.0 36 ..................................... AAGCGACTGACCGGCGAGCTTGCGGCTGGGATTGAT 280148 37 100.0 37 ..................................... CCGACTGGTGATGACCGGGGTGAAGATGCGCTTCGGG 280222 37 100.0 37 ..................................... TGCAGCGCTGGCAGGCTCAAGGCGACGCATGGGCCGC 280296 37 100.0 35 ..................................... CGCCGCTTTGCTCTACCACCGCAATTCCATACGGA 280368 37 100.0 36 ..................................... TCGATACTGGGCGATGATTGGAGCCAGATCCGGGTT 280441 37 100.0 39 ..................................... GACGCAAAGAAGCCCCCGGTACTCACTGCGAGTACCGGG 280517 37 100.0 33 ..................................... GCCTCGCTCCAAACGTGCTGCTGCACGACAGCG 280587 37 100.0 37 ..................................... TTGGTATTGATTTTCGTTGTTGGGGTGTTTCGCCCAA 280661 37 100.0 38 ..................................... ATTTTGAGATTGATCTGGCGGTACTATCGCTGGCACGT 280736 37 100.0 35 ..................................... CAAGCCTGAAGACGATGATCCAGCGCCTGCAAGGC 280808 37 100.0 36 ..................................... CGGCTGACATGCGCAGGAGGGAGCTATGATCGCAGC 280881 37 100.0 36 ..................................... AATCGTAAATACTGATGCCTAGGCGCTCCATCTCAG 280954 37 100.0 37 ..................................... ATGGTCTTCTTCCCGTGGCTCAAGATGCTCGCCTTGA 281028 37 100.0 35 ..................................... ATGATGATCCCTGCTCGTTCATCCTGGTCATGCAC 281100 37 100.0 37 ..................................... GCAAGGACTCATCGGGATAGCTCCGTTTCTCCGTTCG 281174 37 100.0 37 ..................................... GGGAATCTTCATCACCAGGGGAGCCAGTACGTCTGGG 281248 37 100.0 35 ..................................... TCTCTGGGGATTGCGCTCTGGCTATCCCCAGAGTT 281320 37 100.0 36 ..................................... TGCGCAAACTGCGCATAGGTCGCCGAATCCAGCTTG 281393 37 100.0 35 ..................................... CAGATAGCCCTGAATGTCGGAGTTATCGTCGAGAC 281465 37 100.0 39 ..................................... GGCGCGGCAGTCAACGCCCCAACGATCCGCCCAGCCGCA 281541 37 100.0 35 ..................................... TGATTGGGGGTTTTTGCCCGTCGAAGAGAGTCGGT 281613 37 100.0 36 ..................................... AATGGTATCTTTACCCCTACGCCTAGCGGGAGCGGG 281686 37 100.0 36 ..................................... TTTGCCGTTGGACTTCACAACCCAGCCAGACACAGG 281759 37 100.0 36 ..................................... CATAATATCATCACGCATACCTATTCTCCTTGTGTA 281832 37 100.0 37 ..................................... TTATACACGATACTGAAAGGTATTCATATACCCAAAA 281906 37 100.0 36 ..................................... GGATTCATAGCATTAGGACGCCTTGCAACCTGCCTG 281979 37 100.0 35 ..................................... AGATACTGCGCTACTTCTTGTGGGTTCATCAACGA 282051 37 100.0 35 ..................................... TATTGCTGCTAGACGTACTTCGTAGATTCCGTGCG 282123 37 100.0 35 ..................................... TTACACACTGCCCACAGCTCCAAAACCCTTGGGCC 282195 37 100.0 34 ..................................... TCTCCCTTGCTGCGCATCGTGCGCAGATTGCCCA 282266 37 100.0 37 ..................................... GAGGCGATGGAGGTGGGGGAATGAAGCACTACACCAT 282340 37 100.0 39 ..................................... TCGACATTCAGATCGAGATGCGGCAACGCACCGAATCGA 282416 37 100.0 37 ..................................... ACCTAGGGCAGAACAAAGCCCAAACCCTGGCGGCCCG 282490 37 100.0 38 ..................................... GCTTGGCCTCCTCGCGGGCCTCATCTGGGGTTCCGGGT 282565 37 100.0 37 ..................................... CGACTCCCTCAGCCGTCACCAGACCCGTAACCGCCGA 282639 37 100.0 37 ..................................... GCCGCTGCGGCGCGATGGGGCGTTGCCCTGCGTAATT 282713 37 100.0 37 ..................................... CCATGATCAGAATTTGAATCATGGATGGATTCTTCTA 282787 37 100.0 37 ..................................... GCACTCCGCTGGTAGCCGATGATGGTCGTTCCATACT 282861 37 100.0 36 ..................................... ACGCTAATGGGGCGTGGCTCGTCTATGGCTAATTGG 282934 37 100.0 37 ..................................... GCGGGACGGATCTCTCTCTCATGCTCATATTGATGGC 283008 37 100.0 33 ..................................... TACCCAAAGCCCCCGGCCCAAGATGGCCCGGGG 283078 37 100.0 35 ..................................... TGGACGGGGGGGCGCGGCCATATTGCACAGATGAG 283150 37 100.0 37 ..................................... TAGTCCCAGATGGCAACTTCACCGAGGTTGACGACTC 283224 37 100.0 36 ..................................... AGCAGATACCGAATGGCGGAGCAAAGAACTTGGCCG 283297 37 100.0 36 ..................................... TACGCCGCCGCACCTCCACCGGCAGCCCGTAGCGGC 283370 37 100.0 37 ..................................... GATGTGTTGCGCCTTATGCCGCTTTCGTTAGAGCTGG 283444 37 100.0 40 ..................................... GGCGGCACGAGCGTAGCCGTCGCGGTGGGCGGCACGAGCG 283521 37 100.0 36 ..................................... GTACTTACCGAGCGTCATACCACCCTTCAGATCGGC 283594 37 100.0 37 ..................................... TCGGGGGAATACCGATCTTGCACCGTTGCCACAATAA 283668 37 100.0 35 ..................................... TGAAACCCCGTCCGTCTACCACGGCGAGGTTGCCC 283740 37 100.0 40 ..................................... CGTAACCTTACCCCCATGGTAGCGAAGAAGTCCCGCTCGT 283817 37 100.0 36 ..................................... TACCTGGAGAGTGCCGACGACTACCCCCGCCCCGAA 283890 37 100.0 39 ..................................... ACGCGATAACCTCAACCTAACTCTCTCGGAAGAAAAGAC 283966 37 100.0 38 ..................................... CCGATGATTGGACGACGCGCATTGATCGGGCGGATCTG 284041 37 100.0 37 ..................................... ATCGCCGTTCCCGTAATCTGGATCGTCCCATGCTCCC 284115 37 100.0 37 ..................................... CGCCACGCCCCATTAACCGTTTCAGGCGACAACCCAG 284189 37 100.0 40 ..................................... ATAAAACCAAGCCCGAAGCCAGCGTAGATGATCGTCTGGA 284266 37 100.0 37 ..................................... GGCACTGTATCATCGTCCGTATAGGCGTCTAGATAGT 284340 37 100.0 38 ..................................... ATTTCCAAGGCCCGGGTGGAAGAAATCGCGTTGCGGCT 284415 37 100.0 36 ..................................... TGGGCGCAATCGTCTCGGCGTGGCGCATTGCGCCGC 284488 37 100.0 36 ..................................... AACACCACGACCCGCCCAGGGCGCTCAGCCAGGGCC 284561 37 100.0 36 ..................................... AGCGGATATAATCAGGGGTACGGGACGTGGGGGGGA 284634 37 100.0 34 ..................................... CCCAGGTTTTCCCCCAATCCGTGATGTAATCGAA 284705 37 100.0 38 ..................................... CTCGCTCCTCCACCCGAAGGTGGCGCAGCACCATAGGC 284780 37 100.0 37 ..................................... TTTTCTTGTACCCAGTGTATCCATACAAACCATCGAA 284854 37 100.0 36 ..................................... CCACTCCACCATGGCACTTTGGCGCACCCTGCTGAT 284927 37 100.0 34 ..................................... ATCGCCCAATACTAGCCAGGAGACCGTATGACCG 284998 37 100.0 39 ..................................... CTTCTTGATCCTGATGACCGATGGAAGGTCATCGCGTGG 285074 37 100.0 35 ..................................... GATTGCCGAAGTCTTTCCCTGCGGCGCGTACCGCC 285146 37 100.0 36 ..................................... TTTATGCGAACATCGAGGGAAAGGCTACTATATCCT 285219 37 100.0 36 ..................................... GCCGATGGTGGGCGGCTGGGGGCAGCAACCACGCCG 285292 37 100.0 36 ..................................... GCCGATGGTGGGCGGCTGGGGGCAGCAACCACGCCG 285365 37 100.0 37 ..................................... CCAACATAACATCCGCTGCATCGGCAGCGCTCGCACC 285439 37 100.0 36 ..................................... CTGGCGGGGAGACCTTGACTTGGTCATCGAGATCGA 285512 37 100.0 36 ..................................... AATTCCTTAACCGTGTTCGGGCCGACGTTGACCTCT 285585 37 100.0 38 ..................................... CATATCAGAAAGCCATGGATGCCATCATTCGCGATACC 285660 37 100.0 37 ..................................... CGATGAAGCAATGGAGTTTTCCGGCCTAGCTAAATAT 285734 37 100.0 36 ..................................... CGAGCGCCCCGCATCTAGCCCATCTCTGGGCGTTGG 285807 37 100.0 35 ..................................... GCATCCTGGGATGTCGATCCCATTCCGACATTTCA 285879 37 100.0 39 ..................................... TTCGACGATTGCATGTGGGTGTTCTCCTGTATTGTATCG 285955 37 100.0 34 ..................................... CGCCGTGATCTTTAGCCCCTGGCGCACCAGCCAG 286026 37 100.0 38 ..................................... CGACCGGGCCGCGCACACTGCGCAGCGCCGTCACCCGT 286101 37 100.0 37 ..................................... CCCTATGGTGGCCACGCCCACGGTGACGCCAACATCG 286175 37 100.0 36 ..................................... GCGGCGGGTTGGGATGTGCATGGCATTGTGGCGGAG 286248 37 100.0 36 ..................................... CGTGGGGTATCGGGGGTGGGCCTGCGGGGCTGTTGC 286321 37 100.0 36 ..................................... CTCAAGCGTGCCGAGGCTGAGGGGCTGTCGGTGGAG 286394 37 100.0 36 ..................................... AACCCGACGAGATACCAAATCCAGGCATGCCATCAG 286467 37 100.0 38 ..................................... TTGGGAAGCATGCCTGCGGCGCGGGGCATGCAGGATGC 286542 37 100.0 40 ..................................... AATGCGAAAAGGTGGTCGGGGAGGGTAGGGTGTTTAGTTA 286619 37 100.0 36 ..................................... ATGGGCGGCTTCTTGGAGCGCGTGCTGCTCAACGCC 286692 37 100.0 38 ..................................... CCACCGATATGAAGGGGACGATTCGCCTCAACCCTTGC 286767 37 100.0 34 ..................................... TTAGAGATTTCCAACATCATCAGCGACACCCAGA 286838 37 100.0 35 ..................................... AAGGCCACGGCGAGAAATTCCGCTGCGTTAAGCGG 286910 37 100.0 34 ..................................... TCCGGCGTCATCCATTGGCGTACCCCATCCTCAA 286981 37 100.0 39 ..................................... TATCATCGGTAACTATCGCGGCATTGATGCCGGGTATTT 287057 37 100.0 36 ..................................... GCGAGCAGGGGTCATTGATACCGCCCGCGTGCGAGG 287130 37 100.0 34 ..................................... CTGCGCCTGATTCGCTATTTCCGTTTCATCTTGC 287201 37 100.0 35 ..................................... CGGATGTCCATACGGTATGGATGCCGTGCTATATT 287273 37 100.0 39 ..................................... CTTTTCAGAACTTTGCTGTCCATATACACGAGCGGCGTC 287349 37 100.0 38 ..................................... GACCCCATGGCGGTTGAGCCGCCCAACCTGTGCAGTAA 287424 37 100.0 39 ..................................... ACCCCGGCTACACGCTCCTACAGGGCGATTATGCCCAGA 287500 37 100.0 37 ..................................... CTAGATCGGGCGTTTTCACGCTAATGATGTCCCTAAT 287574 37 100.0 37 ..................................... GAAAGCTTCGACCTTGGGATCGTGGGCTGGCTGCTCA 287648 37 100.0 35 ..................................... ACCATTGCCGAAGCCGCCCAGATGCTGGCTTACGG 287720 37 100.0 37 ..................................... TCGGCCATTCTTGGCCATAGCAGCGCGGTCATCACCG 287794 37 100.0 37 ..................................... GCCAAAGCGACCGGGCTACCGCTCACGGCGCATGTGT 287868 37 100.0 35 ..................................... GCGCTACCCCCGGATCGGAGTGGCCCCAATGGGAT 287940 37 100.0 35 ..................................... GCGCTTTTTCGCTGGCTATTGGGGGGCGTTGGGCT 288012 37 100.0 35 ..................................... CTACGAACGCCGCCCATGCCCAGCCTAGTTTGCTA 288084 37 100.0 36 ..................................... ATCCAGATTCTGGCATGAGCGAACCTTTTGAAAATC 288157 37 100.0 35 ..................................... ACAGATTGGCCGCGAGTCAATACGTTTGTCGAAAG 288229 37 100.0 38 ..................................... TTTTCAAGAATTCATCTCGTCCCTGGGTGCTTCAGGGA 288304 37 100.0 37 ..................................... TCAACAACGTGGAATACATGCACGCCGAATGGGACGG 288378 37 100.0 38 ..................................... GCCGAACCTGCGAGCGCGTGGGAAGGAACTCGCCACAA 288453 37 100.0 35 ..................................... TTCGGCGGAATCGCCGAAGATCGACGGCTATGATC 288525 37 100.0 35 ..................................... TACCTGCGGATCTAGGGGCAGATTTGGCGTACCAG 288597 37 100.0 38 ..................................... TGCTACGGCGAGCGTCGCCTGAGGACTGTCTGGTTCGC 288672 37 100.0 37 ..................................... AGTCTGACCCTAAAGCAAGCACAATGTTTAAGCTTAT 288746 37 100.0 37 ..................................... TCCTCTGCCCAGATTTCATATTCTTCACTAGGCAGAT 288820 37 100.0 41 ..................................... CAGGCCCAACCGGGCTACACCTCTACTCCCGTACCGGCTAC 288898 37 100.0 38 ..................................... CGCATCCACACCGAAACGACTGATGGCAATCTCGCCGC 288973 37 100.0 35 ..................................... CGCCATGACCGCTTGTTTCATAATGGTCATACGGC 289045 37 100.0 37 ..................................... GAGCAGGCTGAGGCGTTGCGTGAGATCGTCAAGCGTG 289119 37 100.0 37 ..................................... CATTGGCCACCTGCGCAAAATACCCCCACGCGGCGGC 289193 37 100.0 37 ..................................... ACGCTGGTCAGCCATGGCCATCTCATCCAACACCGCT 289267 37 100.0 36 ..................................... CATTGGCCACCTGCGCAAAATACCCCCACGCGGCGG 289340 37 100.0 39 ..................................... ATAGCTTCAACGCCCTCCTTCCAGTGTGGCGGCGGCGGC 289416 37 100.0 35 ..................................... CGCCAAGCAGGACGCGGCCACCCAACAGAAGATGC 289488 37 100.0 40 ..................................... TTGCGACATGCGGGTTGCGGTGTTGCGGGTCGGTTGCCTG 289565 37 100.0 35 ..................................... GGAGGGGCTTGCAGCCAGGGAGGGGCATCGGGGGA 289637 37 100.0 35 ..................................... CGCCACCTATCTCTGGACGGCCCACGGCCTGCCAG 289709 37 100.0 36 ..................................... TTGCCGCCATCAACACGCAAACCCAGTATGTGCGCC 289782 37 100.0 37 ..................................... TTCCAACGGTCGCCACGTCCTGCATGCGGATGACAAG 289856 37 100.0 36 ..................................... TACCCGGTGTGGAAAAACCGCGTCAGAACGGGGTAA 289929 37 100.0 36 ..................................... TATATTTCCCCCGTGCGCCCGCGTCGCTCGTGGGGA 290002 37 100.0 37 ..................................... AAAACCCTCCCAGGTCGTGGCAAGCAAACTACTCTCA 290076 37 100.0 37 ..................................... GACGACATTACGGCATCTTTGAACGTTTGTCCGCCGT 290150 37 100.0 36 ..................................... TGACACGTCCGCCCGTTGCGCTCATAGGTGTCGTGC 290223 37 100.0 36 ..................................... TTGGAAGCACTGGATTGGCTGCTGAGTTATCAAAGG 290296 37 100.0 36 ..................................... CGCATGAAATTGAAGCGGTACTACGAAGAGCATGAG 290369 37 100.0 39 ..................................... ATGGCGTCCCCCGCGATGCGTCCCGTAGTTGGCTCAGGA 290445 37 100.0 34 ..................................... TTTGCCCCGCGCACGATAACACGGTTGCGAACAC 290516 37 100.0 36 ..................................... ATCTCCCCGGCCTGAAACTGCCTGACCACATTCGCC 290589 37 100.0 36 ..................................... ATTGCGCCTTGTCGATCTTGGCGACGTGACGGAGAC 290662 37 100.0 39 ..................................... CCTGCCCACGACGCTGATCACGATGCGGGGAATGCGGGC 290738 37 100.0 33 ..................................... TGCGCGAGGGTTGCGAGACGAATATCCTCGGCA 290808 37 100.0 35 ..................................... CAAGGTGCACATGATCTTGCCCACGCGTTCGTTGA 290880 37 100.0 36 ..................................... AAAGACCTCAAGGTCTAGCCGCTTCATTCGGCCATG 290953 37 100.0 36 ..................................... TCCGCACGAGTTGGGCGGCTGCCCATCGGCCATCGG 291026 37 100.0 36 ..................................... ATCTCAATCATCACGCCCCTAAAATAGCACACCTCG 291099 37 100.0 37 ..................................... TCAGGATCGAGCGGGGTGAATCTTCAAGTGCGCAAGG 291173 37 100.0 35 ..................................... ATGATCATACTCCTTGGTGGCTACTCAATAACTCC 291245 37 100.0 36 ..................................... CGACCTGGATGTTGCCGCCGATTACGGCGACTGGCT 291318 37 100.0 38 ..................................... CGAAGTGCGACTTGGATGTTGCCGCCGACGCTGGGGAT 291393 37 100.0 38 ..................................... TTGCTCGCACTGCGCCTACCGAACGAGTGGAGGATCAC 291468 37 100.0 38 ..................................... AACTGAATAACAATGGTCTTCATCGTGGTACTCCTTGT 291543 37 100.0 38 ..................................... ACAAGGATAATTCCCTCCGTCGTGTGGCCGTGCACTAC 291618 37 100.0 39 ..................................... CGTAGAGCGCTTGAGTAGCGAGTTGCGCGACGTGGCCAT 291694 37 100.0 35 ..................................... GGCAGCATACGGCTCCACTCCAAGATACTCGCGTT 291766 37 100.0 37 ..................................... CGATGATCGCTACATTGATCGGTTGGAGGTGGAGCGC 291840 37 100.0 37 ..................................... GTATCCCTACGGCACGGGATCAGGACGCCCCTACCGC 291914 37 100.0 35 ..................................... TTCATCAATACCTGGCCTTGGGTGTCTATGATGGC 291986 37 100.0 37 ..................................... ACGTTGCCGATGCAAGATCACCACGGGGAGTGGGGAA 292060 37 100.0 38 ..................................... GCGAATTGGAAGCCGCTGGGCGGGGCCACGTCGGGGCA 292135 37 100.0 35 ..................................... TGAGCCTCTTCCCGCGCATTCTGACGCGCTAAACT 292207 37 100.0 37 ..................................... CCCGCAAGAGTCCTGGCGGCACCTGGTCGAGCATGGC 292281 37 100.0 35 ..................................... TTGTGTTCAAGTCGCTGGACGACAACCCTGCATAC 292353 37 100.0 35 ..................................... TGGGCTGTTCTTCGACAATCCACTGGCCTGCGTGT 292425 37 100.0 36 ..................................... GCGACGCTGTGGGCGATTTGGCGCACGCGGCCAGAG 292498 37 100.0 39 ..................................... TTCCCCCTGCCAGCCCTGTGCGGAAAACGCAAATACCCC 292574 37 100.0 36 ..................................... TAGCTACCAGACACGCTCATACCCCCAATAGACAGC 292647 37 100.0 34 ..................................... CACCACAGCCGCAAGGCGGATGGGTCAGACATTA 292718 37 100.0 35 ..................................... CTCGTAATTCCCGATGCTGAATAATCGTGCATAAC 292790 37 100.0 36 ..................................... TTTAGCGCCAGCGGCGCGGGCCGTACCTTCGGCGCA 292863 37 100.0 36 ..................................... CTGCGGCTTGCCGTTCTTCAGGCCGCAGTGTTTCTC 292936 37 100.0 34 ..................................... GGTAATGGCCTCGGTGGCTGCGGTGGCCGTCGCG 293007 37 100.0 35 ..................................... TTCGTCCTGATAGGTCCCTGGGCCAATCAAGCGAT 293079 37 100.0 38 ..................................... CGCAGGTAGCCCGCCGCTTCGAGGCCGATCTGCCAGCC 293154 37 100.0 35 ..................................... CATGGCCGGTAGATCCTCGTCTGCTTGGTCGCACG 293226 37 100.0 37 ..................................... ACACGACGGAGGGGATTATCCTTGTCACCCTCCGTCG 293300 37 100.0 35 ..................................... ATGCACCGCGACGCGACCTGCCATCTGCTCCGGCG 293372 37 100.0 34 ..................................... AGAATATCACGCACGTTGTTGGCGATGCCAACGA 293443 37 100.0 36 ..................................... ATCGAGGCCCGCGCCCATGGATCGCGCCTGCTGTTC 293516 37 100.0 34 ..................................... TACCACCAACACGGATTTTGTCAAGAGGAAATTA 293587 37 100.0 35 ..................................... ATCCGGCCAGCATCATCGTAGAGCGTGGGGTTATC 293659 37 100.0 39 ..................................... CAGGATCTTGAAGAGGAGGCCCGTCGCCGCAACCGTGTG 293735 37 100.0 38 ..................................... GCATGGACGGCCTCAGCCGCAGCACGTTCTGCATTGGC 293810 37 100.0 40 ..................................... ACGGTGGCATCTACCACCTTGAGTGCATCGCGGCACAGCG 293887 37 100.0 36 ..................................... CGGATTGACCGAGCCGCGCCCGGTGACGCGGGTACT 293960 37 100.0 38 ..................................... TTCCGCGCTCCCCCTCGAACGAGCAACCGTGGATCGCA 294035 37 100.0 37 ..................................... CAACTCGCGGCGCAATTTGGCACGGATCTGCGGTCGC 294109 37 100.0 36 ..................................... GTGGTCGCGGATAACGACGTGGAACCATCGGGAATC 294182 37 100.0 37 ..................................... CAATAGTCTCCACAATCAATTGTGCAAATGCACTCTG 294256 37 100.0 33 ..................................... TTGCCCACCTTGTGGCATGCCTTCACCAGAGTA 294326 37 100.0 36 ..................................... TATAGACATTGTAGAAATCGAGGCGCTCGGTTGCCC 294399 37 100.0 35 ..................................... CTTGGCGTGGCAACCGAGGCGATTGCCACCAATCA 294471 37 100.0 36 ..................................... CGGTACGTCACGGATAACCGTCGTTGGGAATGCTGG 294544 37 100.0 36 ..................................... TTTCCTGCCATGCCCTATTCATCTCTTCTTGACCAA 294617 37 100.0 34 ..................................... GTTCATGCTGTTCGGTTGGGAGGCGGGCGTTGAC 294688 37 100.0 35 ..................................... GGCCAATTCGCACACAAAGTGCTTTTGTGCCTCAT 294760 37 100.0 35 ..................................... AAGATACCGAAGATGCTGCTTGGGCGGCATTCGGG 294832 37 100.0 34 ..................................... TACTCCGTAGACCCAGCATACCGCACTCGCAAGA 294903 37 100.0 34 ..................................... CAAATCCCAAGGCTTATGGAAACGCTGAGAGTAA 294974 37 100.0 35 ..................................... TCTCGCTGAATCGTCCGTCATCCGAGCGCGTATAA 295046 37 100.0 37 ..................................... GACCTCTCTGCGCACATCCAACGCATTGATTGGGTGA 295120 37 100.0 38 ..................................... GGATTTGAACCAACGCGCCGTATCTCCCAGAATAACCA 295195 37 100.0 39 ..................................... TTTTCGAGTTGCAGGTAGGCTTGACCGGCGGCTTGACCA 295271 37 100.0 33 ..................................... GTATGCCGTTGGCTATCACGATCTGCTGCAACA 295341 37 100.0 37 ..................................... TTCGGGATGACTGTTGCTACCGCACGCACCGGCGCAC 295415 37 100.0 38 ..................................... TTGCAGTCGGGCGTGCGCGGGGGCGCACAAGCGCAAGA 295490 37 100.0 35 ..................................... TCTCGCTGAATCGTCCGTCATCCGAGCGCGTATAA 295562 37 100.0 34 ..................................... CGCAGAACCAGGACGATACCGGGCGTACAGCTAT 295633 37 100.0 36 ..................................... TTACCGCCACCTAGTCGGCCTCGTATCCATAACAGA 295706 37 100.0 39 ..................................... AAAAATAATGATCCCGGATACGTGGACGTGGGCGCTGGT 295782 37 100.0 35 ..................................... ATGCTGTCACGCAGCGGCCACTTGGGACGCCCTTG 295854 37 100.0 37 ..................................... TGGCAACTGGGCTGAAGACCGCACGCGACCGATTAAA 295928 37 100.0 39 ..................................... GGGGAAACAAACGATCTGATGCGCGACGGAACACTTCCA 296004 37 100.0 35 ..................................... CTTACCGAAGTGCGGCAACGAAACATCATTGTAGG 296076 37 100.0 36 ..................................... TACGTCGGTCAGGCGCTCCCGAACAAGGACGGGATT 296149 37 100.0 35 ..................................... TACACATTTTTATGCATCCTCATCTATTGACCTAG 296221 37 100.0 37 ..................................... GCGTCAATTCTGCGCCAGGGTACGCTGGAATGGCGTG 296295 37 100.0 39 ..................................... TCTATACGGCATACCCCGTGGGGATGTTTTCTCAGAAGT 296371 37 100.0 41 ..................................... AATGCCCGGCACTCAGAAACGGCGCAGGTGCTGCGAGCGGA 296449 37 100.0 35 ..................................... TCCTCTGGCTGGTAGCTGAAGCGCCGGACAATTCC 296521 37 100.0 37 ..................................... TTTGACGGCCTGACTACATACATGAGGTACCGTATGA 296595 37 100.0 36 ..................................... CGTGTTGCGTTGAGGAGGGGAGACAGGCATCTGCCG 296668 37 100.0 36 ..................................... GGATGGATGGCCAATCCGATGACCGCAGCCAACGAT 296741 37 100.0 34 ..................................... TCCGGCGTCATCCATTGGCGTACCCCATCCTCAA 296812 37 100.0 39 ..................................... TATCATCGGTAACTATCGCGGCATTGATGCCGGGTATTT 296888 37 100.0 35 ..................................... TCATTCTCCGGCACAACCCGCCTTGACGCTGCGCA 296960 37 100.0 36 ..................................... ATCGTGATGGCCAATCCGATGCGAAACGAGGAATAC 297033 37 100.0 36 ..................................... AGCCGATGGAGCCGGTTGAGGCTGGGTCTCTCTTCC 297106 37 100.0 36 ..................................... TCTGGTGGATCGTGCCTGCGGCGCTGGCGTGGGGAA 297179 37 100.0 36 ..................................... CATGGGATTCGTCAAGACCGGCAGCAGCAGTTACAG 297252 37 100.0 34 ..................................... TGCCCAGGCGAACTGGGCGGATTTTCTGCCTGCC 297323 37 100.0 37 ..................................... CGTGTGCCAGAGCCACGCAGCGGCGGCGGCAGCTCCC 297397 37 100.0 33 ..................................... TCAACGGTGTTCGGGGTGATCGCGTCGTTTCTC 297467 37 100.0 37 ..................................... ATTTTCTTCCTGCGCGATATTGATGGTGCAACAGGAA 297541 37 100.0 35 ..................................... TCTGCGCTCCTGACCGGCCTGGGCAGCCCTGCCAT 297613 37 100.0 34 ..................................... TTGTTGAGGCCCAGCACAACCCCCCACATGCCCC 297684 37 100.0 37 ..................................... AAACGAAGGCGTGCGGATGAACGTCGCCCACTTCTTC 297758 37 100.0 38 ..................................... TTGGCCACTATTGCCACCGAGGATACTCTGCCCGGAAC 297833 37 100.0 40 ..................................... CGTTCTGCGCTTACCTCCTCCTGACGGCGATGGCGCTCAG 297910 37 100.0 36 ..................................... CATACGGGAGCGGTCACCGGGCGCGATGTGATCACG 297983 37 100.0 35 ..................................... TTCACTATGGATCTTAATGCCCTCATCCTTGACGC 298055 37 100.0 36 ..................................... CGCAGACGACCGATCTCCCTCCCCACATGATATGGA 298128 37 100.0 36 ..................................... GATGGCGCGGGAATTTATGGCGCAGGCGGTGGCATT 298201 37 100.0 35 ..................................... CCGAGCCAGACCCTGGATGGCCACGTCAGGACTGA 298273 37 100.0 39 ..................................... AGAACCTCGCGCACCTGATCATCAGGAATGTCGCGCCGC 298349 37 100.0 36 ..................................... GACCCTATCGGAGTCATGAGGAGGTGTACCCATGGA 298422 37 100.0 37 ..................................... TCTGGCCATCGGCTGTACTGCGTGCCATCAAACGAAT 298496 37 100.0 37 ..................................... TGTGAAGGGATTGCGCTATGACTCCTCGATGGATTCG 298570 37 100.0 41 ..................................... GGATCAGGGATGTCGGGAATGCGCGGCGGGCGCACGGTGGG 298648 37 100.0 34 ..................................... TTGCGATGCTCTATTTTTTAGCGCATCTGATCAC 298719 37 100.0 36 ..................................... TATGGCGTTCTAAAGCCTTTTAGAACGCTCTTTCTT 298792 37 100.0 39 ..................................... CCTGGCAGACTACGCCGCCGCCATCGAGGATGCCCCGCA 298868 37 100.0 36 ..................................... TAGCGTGCTCTTTAAGGGGCAGGTGGCAATTCTCGT 298941 37 100.0 36 ..................................... ATCCATGAGATCCATGAAGAAATGAAATACACCCCC 299014 37 100.0 38 ..................................... AACATGCGCATCACACTCACACTCGATCTCTCTGAGCA 299089 37 100.0 36 ..................................... GATGGCCTCTCGGATTCGGCGACAAACCGGCTACCT 299162 37 100.0 36 ..................................... GTCTCTCCGTCGCAGGCAGGACAGAGCGAATGCCTA 299235 37 100.0 35 ..................................... TCCGTCAGGTATTGCCATCCTGACGGGAGTCGCCG 299307 37 100.0 36 ..................................... CGTGATACTTGGACGGTGTTTTACATCAGACAGTTG 299380 37 100.0 37 ..................................... GGCTGCGCAGGCCGGGTAGGAGTCGTCGGGGGCTTAA 299454 37 100.0 35 ..................................... GTATACCAGCAACCCGCCCAAACCTGCAAAAACAC 299526 37 100.0 35 ..................................... GGATCTGCAATGGCGCATCAACACCGCCATCGGGA 299598 37 100.0 39 ..................................... TCGTTCCAGGATGGTTCACAGCGGTTGAGTTCGGTGCAA 299674 37 100.0 34 ..................................... GTGTTCAGCCTGAACACACACCAGTTGTGCGGCA 299745 37 100.0 38 ..................................... CGAGGACGCTTACTGAACTTTCATATACTTAAGCCCCT 299820 37 100.0 34 ..................................... AGCTTCGTCGAAGGGGTTGAGACGGTGCTGCGTA 299891 37 100.0 38 ..................................... TAGCACACGCGGGCTACACTGCAAAACGATCATAATGA 299966 37 100.0 37 ..................................... CATCCTCCCAGTGCCCCGGAAGCTGAGCGTTGAGCAG 300040 37 100.0 39 ..................................... ACTCTGGTCGAGGCGGAGTTGCTCAGCCGCGAGACGGGC 300116 37 97.3 36 .........A........................... CGGTCTTGTAGGCGCTCGGCAGTACCTTCGGGGTTC 300189 37 100.0 38 ..................................... GAACAGCAGCAACTTCTCGTTTCAGGAGTTGGAGCAGA 300264 37 100.0 36 ..................................... AGACGAGTTGGTAGTTATTATCGAAACGTCTACTAT 300337 37 100.0 37 ..................................... TAGGAGTAGCCCGCCCCCATCGTTTCAACGACGGCCA 300411 37 100.0 36 ..................................... CACTGTAAGTCGGCAGGGGAAGAATTTCACCTAGAC 300484 37 100.0 40 ..................................... CTCGCTGTATGCTCTGCGCCGTCTGGCGCATCGCGGCGGC 300561 37 100.0 38 ..................................... TGCCCCTTTCAGGGGCACAGAAGGAGCAACACCATGCA 300636 37 100.0 39 ..................................... GGCAATGACATGTGCACAGGCCGTCGCCGATACGGCCCT 300712 37 100.0 36 ..................................... ATCTTCTTCGCCGTTGCCTCATTGACCGGCTTGCCT 300785 37 100.0 40 ..................................... TAGGTATACGATTGATCAGCTAAACGCAACGACTGATTAG 300862 37 100.0 40 ..................................... GTAGCTAATCCCCCCCCCGCTGCGCGAAAAATCGCGCCGT 300939 37 100.0 36 ..................................... ACCTATGAGGCCAGACTATAACATCACCCTGACTAG 301012 37 100.0 37 ..................................... GGTGGGGCGTCCGAGGGAGCCGGTGACGAGGCCCAGG 301086 37 100.0 35 ..................................... TACCATATATCGAACGCCCGTACAAGTGTACGCTG 301158 37 100.0 35 ..................................... ACGATACGGGCTTTGTTCCCAGCGATCTCCTTGAT 301230 37 100.0 37 ..................................... AAGCTGGGCGTGGGCGGGGGAATGATCGTCAACTCAC 301304 37 100.0 34 ..................................... GGCGGTGATGAAGGGGTAGGGGCGGCTACACAGA 301375 37 100.0 35 ..................................... CACCACCACCAAGGCAGAGATGCGGCGGTTAGGGA 301447 37 100.0 36 ..................................... TCTCTCCCGTAGATCGTGGTTCTCGCGGTAGAGGAG 301520 37 94.6 0 ..................................G.G | ========== ====== ====== ====== ===================================== ========================================= ================== 308 37 100.0 36 GTTCCGAAAGCCTCAAATCCGCCCGGCGGATTGAAAC # Left flank : GCGCTATGCCACCCGCATCCAAAGAGACAACCCTCTACATCATTGCCTACGACATCCCAGACGACAAACGGCGCACCAAGATCCACCGAACACTGTGTGGGTACGGAACCTGGACACAATACTCCCTCTTCGAATGTTGGCTCACCAAGCGCCAAATTCTGGAGCTACAAGCCAAACTCGCCAAACACATTATCCCCGATCGTGACAGCATTCGCTTCTACACACTATGCGGGAGCTGTCAGAACAACGTCATCACCGTCGGCAGCGACCGCCCACACGACCCCATCACCGTCATTTTATAATTGAGCCAAAATCGAGCGGCGAAGCATAAGGCCAAACCCCAGGAGTCGCTCGCACTACAAAACATGGCGTCCCAATGCGGCACAAACTATGGTACACTAGAGGCATGGGTTCAGATTGCGTGCTTGGAAGCAACAATTCAAGCAGCCGCTCGAAACAGGCGCATTTCATGGCGTTCCAATGCGCTTGCGAGCGTCGCG # Right flank : GGGTGTCCAATATTCCAACGTGCATGCCGTATATCATTTATACGGTTTTGGTGAGTCGACGGAGCAACAGGCGGATCGACGCAAGATAGATCCAACTTTCTGAAGATCGGGGATTGTAGTCATATTCCTTGCTTAATTGACGGTTCCGTCCGAACCACGCATGGGTGCGCTCAACCACCCAGCGACGCGCCTGCACCGCAAATCCTCGTTGCCCCGGATGCCGCTCAACCACTTCCAAACTTCCCAACGCCCGTTCGTCCATCCACTGCCGCAGCGTGCCGCGATAGGTCTGGTCAACCCAGATTTTCCGCAGCCGAATGCCGCGTTCGTGGGTCGCTTCCAACACCCGCTCAGCCCCGGCTCCATCGTAGGTATTGGCCGCATGCACCACGGCGGTGATCAACAAGCCACCGGTATCAACCAACAGATGGCGTTTCCGTCCCTTGACCTTCTTGCCGCCATCCACTCCACGCTCTGGGCCGCCCACTTCCGTGCTTTTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCGAAAGCCTCAAATCCGCCCGGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-8.30,-8.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 3 315202-302550 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL501401.1 Oscillochloris trichoides DG-6 OSCTscaffold_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =============================================== ================== 315201 37 97.3 38 .....A............................... TGAGCCAGAACCGTTTGTCATTCAAGACATCCTTCCCC 315126 37 97.3 37 .....A............................... ACACATGTACGGGTCGTCGATCTCGACGAAAATCCAG 315052 37 97.3 36 .....A............................... CAACATCCTTTGGGTCTCCACCAACCGCTTTAATGA 314979 37 97.3 38 .....A............................... TCTGTCTGTAAGAAAAACCCGCCCAACACTGTGTTGGG 314904 37 97.3 39 .....A............................... ATGTCCCCATCGAAGACCCAGATAACGATGACCTTTGGG 314828 37 97.3 40 .....A............................... TAGTTTCTTGGTATAAGAGGCCTTTTGCCCTGTTGTCCAT 314751 37 97.3 35 .....A............................... GTAGAGGATCTGCTGGTAGCCCGCGCTGCGCCCAG 314679 37 97.3 37 .....A............................... AGGAAGAATCCGAACGCGAACTTGGTGATCCGCACGG 314605 37 97.3 35 .....A............................... ACCGCCGAAGTCTACGCCCCCATCCGCAAAGCCTG 314533 37 97.3 36 .....A............................... GGATACCAACCAAGAAACACCGTTCCCTTCGTAACC 314460 37 97.3 39 .....A............................... TGATCCATGGATTTATCTTCATACTCCGCGTAGCAATAA 314384 37 97.3 34 .....A............................... TCGTAGCGGCCATACGCACGCCGCACGGTGACGC 314313 37 97.3 38 .....A............................... ATGTCATCCCAGCCCAGGATCTTCGTCAGGCTCCAGCG 314238 37 97.3 36 .....A............................... GTGGTGGTGATTGCCATGGTGTCTCTCCTAGCACAA 314165 37 97.3 35 .....A............................... CACCTTCGTGGTATCGGATGCCCGATGCCACACAA 314093 37 97.3 36 .....A............................... TATCGCGGTTCGCCTCCGTTCGCGCTGGGCGCAGAG 314020 37 97.3 37 .....A............................... CGTCCTGCTCGGCGGCCTCCAACGTCCCATGCACAAA 313946 37 97.3 35 .....A............................... TCTAAAACGATCACGGTGATCGTTTTGATGTGCTA 313874 37 94.6 38 .....A............................G.. TCGATCCTTTCCTCATCAACGTTCCAACTCGCTACCAT 313799 37 97.3 38 .....A............................... CTGACGACTCCACTCGTTGGTGCCATGAACCGCAACAA 313724 37 97.3 34 .....A............................... GCCCTGGGCGGCGGATAACGACGCGCTGAACGGG 313653 37 97.3 37 .....A............................... CTGTTCGTTCTGTTCGATCCCAACCGCACGGCGTTCG 313579 37 97.3 37 .....A............................... AGCAACGTGGCGACGGCGACCCTAGCGAATCACGGCT 313505 37 97.3 39 .....A............................... TCATCATAACCCAACTCCCAGCATACGAATCTGATCAAT 313429 37 97.3 35 .....A............................... ACTGGCCGAGCAAGCGGCAATTGCCCAGATCGACC 313357 37 97.3 37 .....A............................... GAGGTTGACCGCCACCGGGTACTGGTATTGGCGTGGC 313283 37 97.3 35 .....A............................... TTCGTTCGTGATCTCTTGCTTGGTCTTTTTCGGCT 313211 37 97.3 37 .....A............................... CCTCTACAATCTCCCCCGTGGGCAGCGGGTGAATTTC 313137 37 97.3 35 .....A............................... ATTACGCCCAGCCATGCCGCACAGGTTGCCGCCCT 313065 37 97.3 37 .....A............................... TGTAGCGATAAGGGTCATGTGTCACCTCGCACTTACA 312991 37 100.0 36 ..................................... CCAACTGGCCGAGAAGCTGGGCATTGCAACGCCAAA 312918 37 100.0 37 ..................................... TCAGCGCGTGGCGTTTAATGCTGGCGTGGAACGTATC 312844 37 100.0 37 ..................................... GTGGCGCTCTGTCTGCCTCTCCTGAGCCGTATAAAAA 312770 37 100.0 38 ..................................... GCCTCCTACGGTTCCACCAACAAATACATCATTTCCTA 312695 37 100.0 36 ..................................... AGCGGATGAAATACGTTTTCCCGCCGCCCGGAGGCC 312622 37 100.0 35 ..................................... CTCCCCTAACCTCACCGCGACGCGCCACCGGCTGA 312550 37 100.0 36 ..................................... CGCACCCATGCCGCCACCGCGCTGATGCTCACGACC 312477 37 100.0 42 ..................................... TCATATTCTCACCGCTCCCACGCCGCGCTGATGGCCTGCGCG 312398 37 100.0 47 ..................................... CATTTCTGGTTTAAGCAGTGTGGGGCGAAAGCAACAGGTCGGTTTAG 312314 37 100.0 35 ..................................... GTAGCACAGCGTAGGCAATTTGAAATTGACAATGT 312242 37 100.0 40 ..................................... TTCGCGTGTGCCAATAGCCACAATAAGCGTTACGTCGTGG 312165 37 100.0 36 ..................................... GTGGATGGCCATCCCCTCTAGCTCAGTGATGTTGCC 312092 37 100.0 37 ..................................... ATTCACTTCGCACAGGCGGCATCCGTCTGTGACGAAG 312018 37 100.0 38 ..................................... CACTTCCTGATTGCCCTGGGCCTTGCGTTGCGACGCTC 311943 37 100.0 40 ..................................... TAGCGCCCAAGTGCCAGCAGATCCTCGAAGACGCGCAGGA 311866 37 100.0 40 ..................................... TAGCGCCCAAGTGCCAGCAGATCCTCGAAGACGCGCAGGA 311789 37 100.0 35 ..................................... AAAATATTCGCCGCTGTTGGACGTGGCGCGTTCTC 311717 37 100.0 37 ..................................... TTCCTCGACGGCTCAGGATCGACGTCGTTTGGTGGCG 311643 37 100.0 37 ..................................... TACGCACCGTTGCGATAGTGTGAGACGCCGCCGGGAG 311569 37 100.0 38 ..................................... CGGCGCGGAATGCTGGGAACGGTTCAGTGCTGAACTTC 311494 37 100.0 35 ..................................... CCCCGCCTATCTCGATGATCCCCCGGCGGTCTACC 311422 37 100.0 38 ..................................... GATCTTGTGTACCTTGCCACGTTTGGCGAGAGCGCCGG 311347 37 100.0 38 ..................................... CGAACAGATCGAGGGGAAAGCTCCACCCGCTGCAATGA 311272 37 100.0 37 ..................................... TATAACGCGGATGGGGAACTGGTCTCGATCTACGATC 311198 37 100.0 37 ..................................... CCGCACAACACCCTGGCGGCCGGGGCGAGGATAAGCT 311124 37 100.0 35 ..................................... CAGACGGTGGCCACCAAGATTGCCCTGCACAAATT 311052 37 100.0 36 ..................................... GAGCCGAAGAGGTGGTAGTACTGCCCCCGCTCATCC 310979 37 100.0 37 ..................................... TCAAGCGACATCGGGTATCTGACATATCCGGCGGGAA 310905 37 100.0 39 ..................................... TCATCCCCATCCATGGGGATGATCTGCGATGGACTAGTA 310829 37 100.0 38 ..................................... TACCCGGAGCGTGCGAAAGTACGCTCCGTCATCGTTCG 310754 37 100.0 39 ..................................... TTCTGTGCCTTCATCCTCAAACGAATGGCGACACTTAGA 310678 37 100.0 36 ..................................... GATCGTCGGCTCATTGAGGCAGCAGTCACCAAGGCG 310605 37 100.0 37 ..................................... ACCGCGTTCTACTCTGTGTTGTTTGCGGCACTCCGAT 310531 37 100.0 36 ..................................... TGGCGAACTCGCCCCATACCCGATCCTTGGGCAGTT 310458 37 100.0 35 ..................................... TTGGGCGTTGCTAACCACACCATCCTATTGTCGTA 310386 37 100.0 36 ..................................... GTCACGCCAAGAAGAGGACGGCAACCCGATTCGGGC 310313 37 100.0 36 ..................................... CTACCTGGAGTCCGGAGTCCCAGAGTCGATCAGCCT 310240 37 100.0 46 ..................................... TTTGCACTCGCCCGAATACGGGAAATCGCCACCGCGATCTGGCTCA 310157 37 100.0 36 ..................................... AAGCTAATAGCGGGGGAATCATCGGGAGTACCCACG 310084 37 100.0 36 ..................................... TCGCGCTACCTGATCGAATTTATCCGCGAGAACGAT 310011 37 100.0 36 ..................................... AATTCCTCGGCGCTCATTTCTGCCAGCCGCGACCCC 309938 37 100.0 36 ..................................... CTTGTCCACAAAAGCTGAAGGAGACAAACGATCCGA 309865 37 100.0 36 ..................................... TGACAAATGGCCGTCACATCACGCACGTTACCGGCA 309792 37 100.0 34 ..................................... ATCACCACGATCATTGCTGGGTGCGGTGCCTGCA 309721 37 100.0 38 ..................................... CCTGACCAGATCTTCCCAACCTACGATGATCGCACAAT 309646 37 100.0 33 ..................................... AGGCCGTCTACGCCGTAAAACGTCTCTTCTTTG 309576 37 100.0 36 ..................................... CCTCTATCCCCGCGTGACCCGCGTGAATGGCCGTGA 309503 37 100.0 37 ..................................... GTAAACAAAAATTTTACGCCCTACAACTCACAACCAC 309429 37 100.0 35 ..................................... CCAGCGTAGCCCATGCCCAACCTCCCCCCACAACG 309357 37 100.0 37 ..................................... CGACTTTGGGCCACGTGCCGTAATCGTCGTTAATTTC 309283 37 100.0 39 ..................................... TATGGTTTAGCGGTACTGATCGGCGATGGCCGCCGCCCG 309207 37 100.0 36 ..................................... GCGCTCCTTAAGGAGTTGCGCCTCGCGGATATTCCC 309134 37 100.0 36 ..................................... CCGAGCGCTCGTCATTACACCCGCGCCGGATTGACT 309061 37 100.0 36 ..................................... ACGCCAATCCGTGCTGAATGGCCTGTGCGCCATTGA 308988 37 100.0 39 ..................................... TTTTTAGGAATGGTTTACACCTTGAATAATCTTCACCGC 308912 37 100.0 37 ..................................... ATCTCCTTCAGCGATCACTCGCCCCTGAAGCACCCAG 308838 37 100.0 36 ..................................... GTTGCGTGATGCAGCCCAACCGCGAATGCCGAGGGC 308765 37 100.0 37 ..................................... CGGCCAAATTCTTGACCCCGCCCATTGGTATCTGTGA 308691 37 100.0 35 ..................................... ACCACCCCAGCCGCACCGAGCGGCTCGGCGATTTC 308619 37 100.0 35 ..................................... GACGGCTGCGGCGATGCGTCGCAGGGCGGGCCAGC 308547 37 100.0 38 ..................................... ACGGTGGTGTTTGACCGTCACCACAGCCTCAATAGTCT 308472 37 100.0 38 ..................................... ATGTTGCCAATCCTGAGCGACGGCGGCTCATCGGCGCG 308397 37 100.0 36 ..................................... CAATCTTTGTCGGGATGTAGGTACAGATCTCGTAAT 308324 37 100.0 36 ..................................... TAGAACCGGGTTTTCCATCGCGGCTGCGCGAATGTC 308251 37 100.0 36 ..................................... TTCTGTACAGGACGTACAATATGAGATTGAAAAACA 308178 37 100.0 36 ..................................... TCGCACCGGGCTTTATGCCACCCGATGCGCAGACCG 308105 37 100.0 39 ..................................... TTTGGCTCAGGATCCGGAAGGCTAGAAACTTCACCATAA 308029 37 100.0 37 ..................................... TTCCGCCAACACCTGTCTCCATCATCCTTGCGCTGGC 307955 37 100.0 38 ..................................... GGCGCTGGAACGGTGCGGATGCGTGGCGGAACACCACG 307880 37 100.0 39 ..................................... CCAGTCGGTAGCGTCGGGCGCAGCCTGAATCAGCGCCAT 307804 37 100.0 39 ..................................... CCCCATGGCAGTGGGCGGCCACCACACCGAATGCGTCGA 307728 37 100.0 35 ..................................... CCCTTCATCTGGGCGGATGTGTTTTTTGTTTCATA 307656 37 100.0 34 ..................................... TTCATACACCACCACACACCGTTGGCGCATCGAA 307585 37 100.0 35 ..................................... GCAGATTAACACCTTCAAAAGCGGCGATAAACTTT 307513 37 100.0 35 ..................................... TGTAGGCGTGGCGGCGCGTGAGATCGGGGAATTTG 307441 37 100.0 36 ..................................... TAGCACGGCGCTGATGTCTACCTGTCTGCGCAGTTT 307368 37 100.0 38 ..................................... TGGCCGTGTACCGCCTGAGCCTTCGGGTGGATGGGGTG 307293 37 100.0 36 ..................................... AAACGAGACACGAAGCGTAGAGACAGGCATTAAACG 307220 37 100.0 37 ..................................... TTCCCAGGCTTCAATCCATGTTCCAAGGGCAATGATG 307146 37 100.0 35 ..................................... AGTTCGGGACGTAGCGCGGAAGAACGATGATCTGC 307074 37 100.0 38 ..................................... TCTCGACAACGGACAGATCTACGCCGTGGGGCGCTACG 306999 37 100.0 35 ..................................... AAGGCCCAGCAAACGGGCGGCGTTGCCCTGATCAA 306927 37 100.0 34 ..................................... TGATGGCGGCGATGATCAGGAGCAGATAGCCCAG 306856 37 100.0 34 ..................................... TGCTCAAAGACCGCCGTTAGCACTGGTATTGACA 306785 37 100.0 36 ..................................... GAGTTCGGCGGCCAGCTTGGCCAGACATGGACGCCG 306712 37 97.3 37 ....................T................ CCCGAATTCGCGCGCCGCCGAAACTCTTTGGCGAAAC 306638 37 100.0 37 ..................................... CCACATTATTGCTGATTCGTTAACAAATGCCGGAGTA 306564 37 100.0 36 ..................................... GCCCGCATTGGCAATGAGCACACTCCGCTCCTTGCT 306491 37 100.0 34 ..................................... ATTTCCAGCTTCTCTATCCATGCCGCCACCGGCT 306420 37 100.0 35 ..................................... TGTCACGACTTGCTAGCAAGGCCGTCTCACGAAGT 306348 37 100.0 36 ..................................... CCCTACGAAACCTGGGGGAAGCTGAGCGCAGAGGAG 306275 37 100.0 37 ..................................... ACAGGCCACAGGGCTATCGCTCACAACCCCGTCCCCC 306201 37 100.0 35 ..................................... GTATGTGCATCCCGTCCAGCAATTCTTAGGGGCGC 306129 37 100.0 38 ..................................... ACTACGTTTTCGGAAAGATCACTAGGACGGTACACCCA 306054 37 100.0 36 ..................................... ATTTACGCTGAGTCGCAAAAAAATCCGGCATTTAGA 305981 37 100.0 34 ..................................... TATCCACCGCTACTACGCATATCGTCTATCGTAA 305910 37 100.0 36 ..................................... TATCGCGACCCAGTGGCCGTGGACACCTTCGCCGCC 305837 37 100.0 35 ..................................... ACCTCAACAGGGCGCTGACGATTGCCCGCACCGAA 305765 37 100.0 36 ..................................... TTGGAGCGCGGCCATTACGTCCGCACCGTTGTTCGG 305692 37 100.0 35 ..................................... GGACCGAGACGCTGCGCAGCCGGACGGGCAATGTC 305620 37 100.0 37 ..................................... CTGCGACTCGCCCAGGAGGCGGAGGTGGGGGCGTAAG 305546 37 100.0 39 ..................................... ATAGACAACTCCGCCGCTCGTTTCAGCGCATAATGTAGA 305470 37 100.0 37 ..................................... AGCAGACGGAAACTCCACATCGCGGTTATCGGCACAG 305396 37 100.0 37 ..................................... GGCCGCGATGTGGTGGGCGGCGTGCAGGTGGGCGAGA 305322 37 100.0 38 ..................................... ATTTAGACCGTACCTCGAAGCTACGCAGTCCGAACCGT 305247 37 100.0 35 ..................................... TCTTGCGTGGATGGCAAGTTGAGTTTGCCGTCCGC 305175 37 100.0 40 ..................................... CTGCCATGATCAAAACCACGCACACGTTCGATCCTGACGC 305098 37 100.0 39 ..................................... CTGATGTGCCGCCCGTCAGCGCGACGCCCACCGTATTGG 305022 37 100.0 37 ..................................... TCTCCATTGAGGCGGCTGCGGCGAGTGCTATCCCCAC 304948 37 100.0 37 ..................................... GGACGCGAGGTACTCCCTGAAGCGGAGACTCCTGAGC 304874 37 100.0 37 ..................................... AGCTGGACATGTCAAAGTATTCCGTTTATCTGGCTCC 304800 37 100.0 38 ..................................... CGCCTCTCCAGGCGGCACAAAGATCCGCCATCCGCTGG 304725 37 100.0 37 ..................................... CGCGACTCGCTGGCCTCGGCCTATCTCCATCGCCTCC 304651 37 100.0 36 ..................................... GCCTCGGCGTCTGATGAGATACGCGCAGCGCTCGGC 304578 37 100.0 36 ..................................... ATCTATAACGCGGCATTCGATATCAATATCCTCTTC 304505 37 100.0 38 ..................................... TCATGCTTTTGATCGATAACGTGCCGAGGCTTGGCCTG 304430 37 100.0 38 ..................................... TTCATCGTGCGTAATCCTGGCCTTGTTGTCTCGCTTGA 304355 37 100.0 36 ..................................... AGTAGCACATTGAGCGCCTGTATCCACCCCTCTAGG 304282 37 100.0 36 ..................................... CTCGGCCTCTTCGTGCGCGGCACACGCCTTACACAT 304209 37 100.0 35 ..................................... TCATACCGATGGCGTCGGCCTCATCTTCCATGAGG 304137 37 100.0 36 ..................................... GGCGAGTGGTGAGCTGGGGACTCCTGTACATGATGC 304064 37 97.3 39 ............T........................ TTATATATTTAATCATGTTAATCTGCCTTTTCAATGAAA 303988 37 97.3 36 ............T........................ TAGACGATAAGGCAGCCCACCAACACCCTGGCTAAC 303915 37 97.3 37 ............T........................ CGAATTTTCAGGACCCCCTTGTCTTCCACATCGGAAC 303841 37 97.3 39 ............T........................ AAGGAGGGGCATTATGGATGCGTTTCTTGGATTGATAAC 303765 37 97.3 34 ............T........................ ACTTGTTGCGTTTGGATCGCAGGCAGAACACTTG A [303756] 303693 37 97.3 38 ............T........................ ATCTCATCAAAGATCCGTTGCGACCTACGCTCTTCGTA 303618 37 97.3 38 ............T........................ CGATGCCGCCGCCCTCCGCTTCGATCACCACCACGATC 303543 37 97.3 37 ............T........................ GCTGTAGGACTAGGCGTAAACGTCGTAGTTGGACTCG 303469 37 97.3 38 ............T........................ ACTCCGACCCGCTCGGACACCACGCCACCGCCCCAGAC 303394 37 97.3 36 ............T........................ GAATCTCGACATACCCATCACGAAACGCACGTTGCA 303321 37 97.3 37 ............T........................ TAATAACTTACCCGCCTCTACCAGTTGGCGGGTAACA 303247 37 97.3 39 ............T........................ GCGGATTGCAACGAGGCTTCCGCGCCCATCGCCATCGCC 303171 37 97.3 37 ............T........................ TGCTTGTTGTCCGCTTACCTACAATGACTTTGTTTTC 303097 37 97.3 36 ............T........................ TTGGTGGAGAATACCCCATCACCGCCCCTGCTACCC 303024 37 97.3 33 ............T........................ AATGGCCGCTGCGGGTATCCCGGCCTCAACGAA 302954 37 97.3 38 ............T........................ TGCTGCGAGTCGAGGCCGAGGCGGCGCTGGCAGGCAAA 302879 37 97.3 33 ............T........................ CTCGTTGCAGGCATTGACGGCACGGCCATCAAA 302809 37 97.3 36 ............T........................ TAATGTATTCAAGATCCTCAATGATTTCTTGAATAC 302736 37 97.3 36 ............T........................ TCCAGCATCGAAAGCACACCTAATGCCGCAATTTTG 302663 37 97.3 40 ............T........................ CGCCGAACTCACGGATACGGCACTGCGTAACGCGCTTGAA 302586 37 91.9 0 ............T.....................G.G | ========== ====== ====== ====== ===================================== =============================================== ================== 172 37 99.1 37 GTTCCGAAAGCCCCAAATCCGCCCGGCGGATTGAAAC # Left flank : CCGAAACGGGCGGCCCGGAACGCGGCTATGATGGGGGAAAGCATGTCAAGGGGCGCAAGCGCCATCTCCTCGTCGATACCCTCGGTCTCGTGCTGCTTGTGCTTGTGCATTCGGCGGCCTGCTCGGACCGTCAGGGTGCGAAGATCGTGCTGACGGAAGCTGCGCATCGTGTTCCCACGCTGAAGAAGGTGTTGGCAGATGGCACGTATCGAGGCACCCTCGTGGATTGGGTGAAGCAGCAGTGTTCCTTCGTTCTGGAGATCCGGCTCCGCCCCGATGAACGTCCAGGCTTTGTGCCCATTCCCCAACGTTGGAAGATCGAGCGGACACTCGGTTGGCTCAACCGCTATCGGGTCTTGAGTAAAGATTATGAATATGCTCCGGAATCCAGTGCTGCATGGGTTCTCGTCACCTCCACTCGTATCATGCTCAGTCGCCTTCGTCGGGCGCTGGCTGAGCCATGAGCGAATAATTAAATACTACCTCTAAGGGTGCAAGGG # Right flank : GGTGTCCAATATTCCAAACGCCATACACACGGAGCAAAGAAAACACGGATGTAGCGCAGTATGATGCCGTAAAAAGCCCCTTCTTAGGGTATACTGGTGGTACTTCACGCCGACCATATACCCAGGAAGGGGGTAGCGCGGATGGTACCACCGAAGACCACACCTGTCCAGCCGGACACCTACGACACGGATGTCAGCGATGCGGCGTGGGCGTATCTCCGCCCGTATCTGGATGTCCGGGCGAAAACGGGGCCACAACGACGGGTCGATCTGCGGGCGGTCTGGAATGCCTTGGCCTATACACTGCGGACAGGGTGTCAATGGCGACTATTGCCGAAGCATGTTCCTGCCCGCAGCACCGTCAGTTACTATTTCCACCAGTGGCGAAAAAAGGGCATCTGGACGCAGATACATGACCTGCTGCGCCGACACGTGCGGCAGCAGGATGGGCGAAACGAGGAACCGAGTGCGGGAGTGATGGACACCCAAAGGATCAAAAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCGAAAGCCCCAAATCCGCCCGGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-8.10,-8.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 4 323988-316187 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL501401.1 Oscillochloris trichoides DG-6 OSCTscaffold_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================================================== ================== 323987 37 100.0 36 ..................................... TAGTTGGCTGGCGCTGGATAACCTCTCGGTGCGTCT 323914 37 100.0 36 ..................................... GAACAGCTACCCAATCCCCAACTTCTAACATTTCTA 323841 37 100.0 39 ..................................... GGGCAGCGAGGATATGCGCTGGAAGCTCCGCACGGCCTT 323765 37 100.0 34 ..................................... ACATGCTAGAGACGGGACTAAACATTATCGAGAC 323694 37 100.0 37 ..................................... TCGTCAAGGATGGGGATGCTGATACTCTGCACCGTTT 323620 37 100.0 35 ..................................... GCGATGAGTTGGCCAGCGCCGTGCTGACGGCCTGG 323548 37 100.0 35 ..................................... TTATGTGTCCGTGGCCGATAGGGCCGCACCGACGC 323476 37 100.0 35 ..................................... TTTACTTGCACTCTCGGAGGCCCGCGCTAATCGCC 323404 37 100.0 36 ..................................... CCCATCGCTGCGTGAACGTGTTCGACACGACAACAT 323331 37 100.0 38 ..................................... TTCGGTGCTATCGAAGCGGACGACCTCGATGTCAGGAT 323256 37 100.0 74 ..................................... ATCATCCGTTCGTGGATTACAGCGACGGGACGGGCGCGAGGCTGCACAATATCTATCTCGTGCGGTGGCTCGTG 323145 37 100.0 35 ..................................... TCTTGGAATGGAAGCTCGCATGGCGTACCTTGGGG 323073 37 100.0 35 ..................................... CAAGACGATGGACGATAACCCTGCATACCGCGATG 323001 37 100.0 38 ..................................... TGATATAATGCACTGTTGCGCAAGCCGCTACTCACGCC 322926 37 100.0 37 ..................................... GTGTCCCACGGGACACAACTGCGGCTGTCTCGGCTCC 322852 37 100.0 34 ..................................... CACCGTTCGTGCCATAGACATTGGGTCAGGAGAG 322781 37 100.0 39 ..................................... CGCCCAGGTCGCTCACGCCGACGCGGCGGTGGCCACGCT 322705 37 100.0 36 ..................................... TTTATCTTTCCACTGCGCACATACAACATTTTTTTG 322632 37 100.0 36 ..................................... TTGGTAGTCGTCTCCTCATCCTCAACCGCCATGCCG 322559 37 100.0 37 ..................................... GATCTGTCGTGCCGTTGAGAAATATGGCACGGCTGGG 322485 37 100.0 34 ..................................... ATAAGCGGCGTTATCCGCCACGTTATCCCATACA 322414 37 100.0 36 ..................................... AGACCAAAACCCGGCCTACCAGGAGGCGACGGCATC 322341 37 100.0 35 ..................................... GGGAAGGGAAGGCGTTCGGTGTAAGGCGTATTTCG 322269 37 100.0 38 ..................................... TACTACTCAGCGGCGTCGGTGAAGCACCGCTTGACGTT 322194 37 100.0 41 ..................................... TAACGCCCAAGCGCCAGGATATCCTCGAAGATACGCTGGAA 322116 37 100.0 37 ..................................... TGGATTTGCATGCCATCCATCCACTTCTCGGCATACT 322042 37 100.0 38 ..................................... CGCTTCGATACCTTGTCTTCTCCCTTGCGCTTCTCAAC 321967 37 100.0 34 ..................................... CCGGGGGCTTCTGCTTTGTGGGCTATTTATCACC 321896 37 100.0 37 ..................................... AGACCGAGCGCCTTGCGTGCAGCCTCGCAAGTCTTCG 321822 37 100.0 37 ..................................... CTACCGTCCTTCCGCGTACCAATCAGCGTCATGCTGA 321748 37 100.0 38 ..................................... GTCATTGATGTACCTATGCCAGCGGAATGAGACGCAAC 321673 37 100.0 36 ..................................... TGGTTATGGTGAAACGTCGCATGCTACTACTGGTAA 321600 37 100.0 39 ..................................... CAGGAACAGCCAGAGCAGCACCGGAACGCTGGCCGAGTA 321524 37 100.0 32 ..................................... CTCCACACCTCGCGCTACTATCCGAGCATCAG 321455 37 100.0 38 ..................................... GATTTCGGCCGTTACACTGACTACCGTCTGTACGGATG 321380 37 100.0 37 ..................................... TTTTGCAGGGTTTAGGCGGGGATGTTATACTAATTCC 321306 37 100.0 38 ..................................... TGGGGCCGCGCTACGGGATCGTCTGCTACATGGGATTT 321231 37 100.0 38 ..................................... GTTTGGCAGGATGTTTATTCTGGTGATGCTGTAGTTGA 321156 37 100.0 37 ..................................... AACAACATATATATGTTGTGATCTAGGAAGGGGGTGA 321082 37 100.0 35 ..................................... TGCTGAATTATTCCCGTAGGTTCCTTCAGATCCGT 321010 37 100.0 36 ..................................... CCGCGAAGATCGGGTAGGCGCGTGCGTAGTCAGCGG 320937 37 100.0 36 ..................................... AGGCATGCTGGCATCGCGCCGCCGCTCGTCTCGTGC 320864 37 100.0 37 ..................................... TGCCCAGCCAAACAACTGGCCGTGCAAGGTCATTGCC 320790 37 100.0 38 ..................................... TGTAGCGCAGCAAACTTCTGACTGAGGTTGGTTTGTGG 320715 37 100.0 34 ..................................... CGAGGCGAGGATTGAGAGCCGAAAGAAGGGAGTA 320644 37 100.0 35 ..................................... GACTGCAACGGCATCTCGGCGAGCAATTCCTTCAA 320572 37 100.0 39 ..................................... AGTCAGGATGGCCAGCGCAAACGGGGCATAGACCTTCAG 320496 37 100.0 36 ..................................... GAGCATGACCGATGATATTAGCCGCGCACTGGACAT 320423 37 100.0 38 ..................................... TGTTCAAACGAAAGGACTCAACCGTGCCACCGAATGAT 320348 37 100.0 36 ..................................... GGAAGCGGTCACGCTGATCAACAGCGTCAAACTGAC 320275 37 100.0 39 ..................................... CGCAAACTACGCTTGGATTACCAAGCAAAGCTTGGAGTT 320199 37 100.0 36 ..................................... TGACCTTTTGCAGCAGGCGCATGGCGGCCATCGAGT 320126 37 100.0 37 ..................................... GTTGCGATGGTGCGGTGTCAGCACGGAGAGAGGGACG 320052 37 100.0 41 ..................................... CGGCTACCGCACCGAGGCTGAGGCCGAGGCAGGGCGAAAGA 319974 37 100.0 39 ..................................... CGCGATACATCGCGTCTGGCCGCACGAGCCACGGATCGA 319898 37 100.0 33 ..................................... CGCTGCAAATAGACGCTCACGCATTCTGGTCTC 319828 37 100.0 34 ..................................... GTCGTCATTGTGCTGCTAGGTGCGGGGCTGGCAC 319757 37 100.0 36 ..................................... ATGCAACACAAGCAATCAATCATAATCTCACGATGC 319684 37 100.0 35 ..................................... ATCCATATAGGTGCTGCTCGGTGTAGTGAGTTTGA 319612 37 100.0 36 ..................................... GCGATGCTCCCCCTACGCATCGTGGCCAAAGACACC 319539 37 100.0 37 ..................................... TATCACCTGGGCGATGGAACTGATTAACAGAGTGCGG 319465 37 100.0 36 ..................................... CGAGGCTGGTGGCGGCGAAAAACTGACGCCGGATCA 319392 37 100.0 35 ..................................... CTGGCACCCGTTCGGTGCGCACACCGGCGCGGGAA 319320 37 100.0 34 ..................................... CCAGCAGGCGCATGCGCTGATTAGCGGCGACGGC 319249 37 100.0 36 ..................................... ATGTACGATCCTTGGATCAGCGACTTGTGCCATAAG 319176 37 100.0 37 ..................................... ACGGCCCCACCCCCACCGCCACGGGCACCGCCACGGG 319102 37 100.0 36 ..................................... TACTACTCTACCAGCACCACTTCAAGCGGCCATTGA 319029 37 100.0 37 ..................................... AAAAACTTAATTATCTGTGTCCCACGGGACACAAGGA 318955 37 100.0 37 ..................................... ATATCCAGAGTCGGGGCCATCCCACATTATTGCTGAT 318881 37 100.0 36 ..................................... TCTTGGTATAGGCGGCTTTCATTCCCGTCGTCCACA 318808 37 100.0 34 ..................................... TTCCGCGTTGCAAAGCCGCGTAAGGCAGAGCAAG 318737 37 100.0 37 ..................................... CTGCCCACCGCCTACTTCGTGAATGGCGATACTGGCC 318663 37 100.0 35 ..................................... TCGCTGGAGGGGGCGGCGGATATCTATGAGGCAAC 318591 37 100.0 37 ..................................... TGCCTGAGAAACCACCAGCGCGGCCACGGTATCTATG 318517 37 100.0 35 ..................................... CGCCTCTGTCAGCGTGATCTTCCCGCCTCGCCTAC 318445 37 100.0 48 ..................................... TGACGCGGGTCTTGTGTTTGAGGCTCGCGCCGCGCAGCGACCGACCTA 318360 37 100.0 35 ..................................... CGCTCCTGAGCGTGCAAGAGCAGGGGATTGGCCTC 318288 37 100.0 34 ..................................... TTGGCGGCTACGACCAGACATTTGTATGGCTCAA 318217 37 100.0 35 ..................................... GCACGGGGCGGCACGGGACGATCTCTGTATCCGGC 318145 37 100.0 36 ..................................... ATGTCCTCAGTCACGTTGGGCGCATCGGTGTTGCGT 318072 37 100.0 37 ..................................... TTCGATTACTGGATCACCCACGCCGTTGCTCTCTACC 317998 37 100.0 39 ..................................... TGCTCCCATCGCCCTCCATCTTGATGGGCAGGTTGTGGC 317922 37 100.0 38 ..................................... TACAGGCAACCCTTACGCAGCGGCGCGGGCCGCAATGG 317847 37 100.0 35 ..................................... CCACGCCCAGCCGTCCTGATTTTTGATCTCGCGTC 317775 37 100.0 36 ..................................... AGTGGGCCTACCTGCTCATCGGCGGGCAGGCGACGC 317702 37 100.0 37 ..................................... GGTTGAGCGTGGCCAGCACCTCGCTAATGATGCCCCG 317628 37 100.0 38 ..................................... TTGTGAGAAGCCATAGAGCAAGATGCACATGCTCACGT 317553 37 100.0 39 ..................................... TAGCATCAGATCGGGAAGATCGCCTAGATCGGCTATTGT 317477 37 100.0 35 ..................................... TCCTCTGGTTTGTAGCTCATGCGACGCACAATCCC 317405 37 100.0 37 ..................................... TAGCCCACAGCGGCCAGCTGCGCGATGATCGCCGCTA 317331 37 100.0 36 ..................................... CGTGCCCGCACGCCAACATAGCAGCGCGAGCCTCCA 317258 37 100.0 39 ..................................... AGCCGCAAGACGAGGATGAAGCGATCGCCGTCGCGAAGA 317182 37 100.0 34 ..................................... CATGCAACGCTTCAAGTAACCGTGGTGGCAACTT 317111 37 100.0 37 ..................................... ACCGATAAAAAAACAGGGTTGTCACGTGACAACCCTG 317037 37 100.0 36 ..................................... CAGGGATACGCCATTGTCATGGGCGTCTACCTGTTG 316964 37 100.0 39 ..................................... GAGGGGGTGATCGAGCATCGCTCGTTCACCCGTGAAGAG 316888 37 100.0 38 ..................................... TTCACTACAGGAGAACTAAACGAGGAAAGAGCCTGGAA 316813 37 100.0 37 ..................................... CATCTATGCTACTCTATTGATGTGGCACACTTGCCAC 316739 37 100.0 35 ..................................... GCTGTGGAGCGGCGCAATCCTGATTGCGCTTGATG 316667 37 100.0 37 ..................................... TTCTTCGCCGAATCCTCAGACGCCGTGCCCACGTCGC 316593 37 100.0 33 ..................................... GGAACACCGCTGGGTTGCTCGCCCAGAGATGGG 316523 37 100.0 37 ..................................... GGAGGGAAGGTCGCACGGGGAGTCTGTCTTTACCCTC 316449 37 100.0 39 ..................................... CTCCCATCCCGCTGGGGGATAGCCACGCCCGACGACTTC 316373 37 100.0 38 ..................................... CAGATGAAACGATGCTATATCAGCCCCGTTCGCTAAAC 316298 37 100.0 38 ..................................... GACCTTGCCCCCAGCGCGGCTATTGGGCTACTCACATC 316223 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================================================== ================== 106 37 100.0 37 GTTCCAAAAGCCCCAAATCCGCCCGGCGGATTGAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATCATCTTGGTACGCATGGCGATTCCCGATTCT # Right flank : TTAACCCTATCTAGGGGCGGCTCTAAGAAGGTAGTATTTTAATTATTCGCGTCTTCTTGTGCCCCCGCTGTATCCATGAAGATAGAAGCGAAGGAGTCCATGGAGGCTGCGATGAAGACACGGTATCAGGCAGCGGATGCGCTTGAAACAGTTCAGACCTATCCATCCGGATCTCACCGATGCAGAGTGGGAACTGGTGGCTCCCGTGGTGGCTCAAGGGTCACATCGGCGGGGGAAACGCCCAAGCGTGGATCGGCGGGACGTGCTGAATGCCATCTTCTATCGCGCCCGCACCGGCTGTCAATGGCGGTATCTGCCGCATGAGTATCCGAATTGGCATACGGTGGCGACGTGTTTCCGCACTTGGCGTCTGGATGGGCGTCTCCAGGAGGTACACGACGCCTTGCGTCAGCGGGTACGATGCATGGTTGGCAAAGCTCCGACGCCAACCATGGCGATTATCGACACCCAGAGTGTCAAAACCACCGAAACGGGCGGCC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAAAAGCCCCAAATCCGCCCGGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-8.10,-8.30] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : NA // Array 5 332731-324930 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL501401.1 Oscillochloris trichoides DG-6 OSCTscaffold_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 332730 37 100.0 37 ..................................... AAGTTCATGCGGCCAGGCGGCCACGCCCACACGATAC 332656 37 100.0 36 ..................................... TCCAACACGGCCTGTGTCATTGCCTCGATAACTTCA 332583 37 100.0 40 ..................................... TCGTTCGTGCGGCCAGTCGGCCACGCCCACACGATACCAC 332506 37 100.0 35 ..................................... CCAGTTGTACGGCGAGGCGGGGCTATGGCATGGGC 332434 37 100.0 35 ..................................... TCTCATTAGATTCGAGCATGCGACACCACTTGCGA 332362 37 100.0 36 ..................................... TTGATAAATTCGGATCAGGCCGTCGCCATCGGCGCG 332289 37 100.0 41 ..................................... ATAGGGCGGCTCGGTGCCGATCCTGAGATGCGCTACACCGG 332211 37 100.0 38 ..................................... CGCGAAATCGGCGACACGTCGCGCATGGTCTGACGTGC 332136 37 100.0 38 ..................................... CGACTCCTGAGCGCGTCACCACGCCACCCCGGAGGCGA 332061 37 100.0 36 ..................................... AGATCGTTGACGACGGTCAGATCGACCGCGCCCAAC 331988 37 100.0 36 ..................................... CTCAACGCAACGCGGATCAACACGATCATGACCGCG 331915 37 100.0 37 ..................................... ACGCGCCATACAAGACTCCTTTCGTGGCTATCGTGGC 331841 37 100.0 38 ..................................... AGGGGCTGACTGGCCCGGTGTGGCGCGATCTTCGCGAT 331766 37 100.0 37 ..................................... AAAAACCAACGGCCTAGAGATAGCGGCGCTATCTCAG 331692 37 100.0 39 ..................................... CTCGATCTGACGTTCGCAGAGATCGACCAAGGCTTTACT 331616 37 100.0 38 ..................................... TTCGCAAATGCTTATACTCATCCGACAGCATGGCATGG 331541 37 100.0 37 ..................................... CAAAATCGCCTTGGCGATCTGCTTGTCGAACAACTCG 331467 37 100.0 37 ..................................... ATATGAAGAATCCCGACAAGGATTATCATTCATGGCG 331393 37 100.0 37 ..................................... CAAAATCGCCTTGGCGATCTGCTTGTCGAACAACTCG 331319 37 100.0 36 ..................................... GGCGGCGACTCAATCCCGTGGGGCGGATTGCCCACG 331246 37 100.0 38 ..................................... AGATCGACCGCGCCCAACGTCGCGGCGAATGCAACGGT 331171 37 100.0 36 ..................................... TAGGGTTATCCTCGTGGCGACTATCGAGGAGGGCGA 331098 37 100.0 38 ..................................... CAATGATGCGCCGCCACGTTCGGAGCACCGTGGCATCC 331023 37 100.0 42 ..................................... TCCAGGAGCGGATGGCCGAGGACGGCATGGGCGTGGTTCCAA 330944 37 100.0 40 ..................................... GAATCTTGGACAATAGAGGGTTTGTCCCCCTCTGGAACCA 330867 37 100.0 40 ..................................... TTGGAAGGTCGTCGTCCCCTCCATAACGACCTTCCACAGA 330790 37 100.0 38 ..................................... GTTTCCATGACTGGGCTTGATTCCCTGGAACGCACCAC 330715 37 100.0 35 ..................................... GGCCAGGAAGGTCTCCACGTGCGAGATCCGAAAAA 330643 37 100.0 37 ..................................... CGTCTGGACAACGCACCGGCGTCCTCCCTTTGTCTGG 330569 37 100.0 35 ..................................... TTGCTGCTGATCCATCATGGAAATACGGTGCGGTC 330497 37 100.0 38 ..................................... GATGCCGGAGCCGCATCGATCCACTGGCAACCCAACGC 330422 37 100.0 36 ..................................... TAAAGAGTTGTCAAACTTGACATAGCTCAAAAAGTA 330349 37 100.0 35 ..................................... TTAAACGTGCAGATATTAACGAGTTGCCGAAAGTA 330277 37 100.0 35 ..................................... TTTACAAGAAAGAGTTTTGACGTGTCTACTCCAAT 330205 37 100.0 36 ..................................... TACGGGAAAGATCCGACCAACAAGTACCTGACACTC 330132 37 100.0 37 ..................................... ATACCATCAATCAATGGTAGTGGGCCACTTGCTACGC 330058 37 100.0 38 ..................................... TAATCAGGCTCAACAACAATAACCCATAGTACCACTGG 329983 37 100.0 36 ..................................... CATTGCCACTGCCAAGGTAGGCGGGATTGGCACCGC 329910 37 100.0 36 ..................................... ATTCATCGTGGCATTATCCTCGCTGGGCACGGCGTT 329837 37 100.0 36 ..................................... CGCCTCCTCTGCGGTTTGATACGCTCCAGTAGGGCC 329764 37 100.0 37 ..................................... GGCAGCGAAGGGCAGCACTTCGAGACGTTTGACCCCG 329690 37 100.0 38 ..................................... TCTACCGCCTCGACAGTCTCGCCCGTGCCTACCCTGAT 329615 37 100.0 39 ..................................... TCACCCCTTGTATGTATCTGGGGCGGAAACTACTTTGCG 329539 37 100.0 35 ..................................... CCGTAATTTCCGACATCATGGGCGATACACCTTCG 329467 37 100.0 38 ..................................... CCGCACCCATGTAGTCAACGAGCGGGCGTAGAATACGA 329392 37 100.0 36 ..................................... TGGCATCATGGGCAGGCCGGGGGAGTTGCCGAAGCC 329319 37 100.0 38 ..................................... TGATACGCTCCAGTAGGGCCATTGCTGTCATAGATCGG 329244 37 100.0 35 ..................................... GCACGAGGCGGATTGGGAGACGTTGAGTACCCGCG 329172 37 100.0 36 ..................................... CTGTGTGATTGTGGTCGGGAGACCACACCGACGCGA 329099 37 100.0 41 ..................................... TAGCGTGGCTGATAACATCATCACAATCATCATCATAATCA 329021 37 100.0 33 ..................................... CAAGCTGCCAGATGAGATGCCTCTTTAGGAGAA 328951 37 100.0 36 ..................................... TTGTGGACTCGTGGTCGAGTGACCACACCGATATGA 328878 37 100.0 37 ..................................... CAGCTAGAGGCTGTGGTGGAAGCGCTGGGGCTGGGTG 328804 37 100.0 35 ..................................... TGTTACGGCGGAAGCGGCCTCCAAGTTGCTGGATT 328732 37 100.0 40 ..................................... GGCATCGCCATACTCTTCTTCATTGAGGCATGCAAGGGTG 328655 37 100.0 36 ..................................... GAGCAACTTCTTGCGGTGCTAGCCCCCTCGCTGACG 328582 37 100.0 42 ..................................... CGAAGAATACTGCAAATTCATAGATGGAACGATACAGCGGTT 328503 37 100.0 34 ..................................... TCGTCGATCTGCCACGCACCATCCTCGTAGATCA 328432 37 100.0 33 ..................................... GACCTCGTGGCGACCCGGACGACCAAGCCCCAA 328362 37 100.0 33 ..................................... AGGAGAAGATCGATTCGACGCAAGGACCACGCC 328292 37 100.0 37 ..................................... TGGGGTGGCACGACCTGGGAGCGGCGCGATACCGGGC 328218 37 100.0 36 ..................................... AGCCGAAGCGCTGGCCGTATCGGGCAGAGGCCCAGC 328145 37 100.0 37 ..................................... ATTCTCCAATCATCGTATGCAGATGGTTGTTAGATAC 328071 37 100.0 39 ..................................... GATCTTTATGAGCAGGTGCGACACCTCGCTCATGGGGAT 327995 37 100.0 36 ..................................... CGCCCAGGCGAACTGGGCGGATTTTCTGCCAGCCCT 327922 37 100.0 36 ..................................... CTCCGCTCCCACGACCCGCGCCGAGCGCTCACTATA 327849 37 100.0 35 ..................................... TCTGAAGACAGATCAAAAGAACTACCACTATCTCC 327777 37 100.0 36 ..................................... AGTATATCGGCGTCTTTCTCCCCTTCGACAATGTAG 327704 37 100.0 36 ..................................... TGGCCTTATCAAAGCCGATCATCCCATTCTCTGGTA 327631 37 100.0 37 ..................................... GTGCGAAGATAGCATCGTAGATGCTCGATGCACGAGC 327557 37 100.0 37 ..................................... TTTACGGATTTCAAGGCAAAGCGGCATCTGCGCCGCT 327483 37 100.0 39 ..................................... TTGGCAGCGAAAAACGCGTGGGTAGGAAGGTTTGGTAAG A [327474] 327406 37 100.0 37 ..................................... AGTCCACGGATCAGCTGTGGACAACGGGCATGAAAGC 327332 37 100.0 35 ..................................... GGGATCGCTAATGACCTGGGGCCAGGGCAATGTGC 327260 37 100.0 36 ..................................... ATTATGTGGGCAGGTCTGACCTTCGGCTTCATCGGG 327187 37 100.0 41 ..................................... ATGATGAAGCCGAAGCATATCAAGGTACCTAATTTCAAGAA 327109 37 100.0 38 ..................................... ACGTGCTGGCCCTGAGGAGCTCCAGGGCCAGGACGAAG 327034 37 100.0 38 ..................................... TGGCTAGCGATCGGTTGGAGATTGAATTACCTGATGAT 326959 37 100.0 39 ..................................... CGCAACCTCCCCCGGCTCTGCACGAGCGTTACAGTACAA 326883 37 100.0 35 ..................................... CAATTTTGCCCAATGATTATCAGCGTTGAGAGCGC 326811 37 100.0 39 ..................................... TCCGTCGCCAATTGCTTGATGCGCAAGGTTTCATCCCGG 326735 37 100.0 38 ..................................... TTTGGCTAGTCTAGGTGAGGGCGCATGATTGATACCAG 326660 37 100.0 35 ..................................... ATTGAGCAGACAATCCGGGGCGCTAAATCCCGCTC 326588 37 100.0 37 ..................................... TGGCCCCGTCAGCCACGGGAACACAATACCACACACA 326514 37 100.0 37 ..................................... CCTGCCGGAGGGGATAAACACGTCACGGATTGATGTT 326440 37 100.0 37 ..................................... CCGTGATGTGACTCCTGGGCAGACGTGGGATGACTTG 326366 37 100.0 36 ..................................... GCATATCACAATCATCATCAACAACATCGCCGTTAA 326293 37 100.0 35 ..................................... CATTATCTGTAACAATCACACAACACGACGGCGGC 326221 37 100.0 40 ..................................... CGGCTTCGAGTGGGCACGTGGGCAGGGCTGGAGCTTCGAG 326144 37 100.0 40 ..................................... CCCAGATCCTGGGTTTGGCCCTCGAACTCCGTAGACAGAA 326067 37 100.0 39 ..................................... CCAATCACCGTTCCGTCGAGGCTATAATTTTCGCCACGA 325991 37 100.0 36 ..................................... ATGAGCGAGCATGCGCTGCGGGCGCTTCAGGATATG 325918 37 100.0 35 ..................................... GGCACGCTACTGAGCGGTGGCCGTGTTCCGCTACG 325846 37 100.0 37 ..................................... CCATCGGCTTCGGTCAGGGTGTAGCGGTTGCGTACCG 325772 37 100.0 36 ..................................... CGTTGGCGAGGCGTCATTTACTCGGCCACGAGCGTA 325699 37 100.0 37 ..................................... TTGCCGATGCCCAAATTGATAGCATCACCAACCCTGG 325625 37 100.0 36 ..................................... CGGTGATTGGTCGGATCTTTCACCAGCAACCGCAGA 325552 37 100.0 37 ..................................... ATCTATAACCCGCTCTACGGCTCGGCCTCCTATAGTG 325478 37 100.0 35 ..................................... ACACGGAGGGGGGCTATGAAATACCACCTTGAGCT 325406 37 100.0 39 ..................................... AGACCTGGACGGCGGTTTTCCTCGCGGCACAAGCGGTGC 325330 37 100.0 36 ..................................... ATGCGCTCGGAGTACCCGGAGTCGTGCCCGGCCTGC 325257 37 100.0 36 ..................................... GAAGATGTTGGCCGAGGCGTGGCACAGCCTGGAAGA 325184 37 100.0 37 ..................................... AAGAAGCTCCGATCTTCCTCTTCACGGACTTGGCCGG 325110 37 100.0 35 ..................................... AGTTCCGCCTGTACCGACGCTTCGGCCTGGGCCGT 325038 37 100.0 35 ..................................... AGGACATAAAACGATCACGGTGATCGTTTTATGTC 324966 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 106 37 100.0 37 GTTCCAAAAGCCCCAAATCCGCCCGGCGGATTGAAAC # Left flank : CCGAACTCCCCCTGAGCGACCCACCACCCAGCCAGCGTTACGGCCTCGTAGCCGTCAGCGGGGCAGGCACCTCCGTCGAGGCGAACTTTGAAGATCTGCAACTGCGGGCGTTGCGGTAGGAGGGAGAGAGTAGCGGTTCAACATGATTTCTACAACACTACAAGCACCCACCGCTCTATTACATACTCGCCGGAGACAATGCGCGGAGCTTCGCCGTTCTACGCACTATGCGGGAGCTGTCAGAACAACGTCATCACCGTCGGCAGCAACCGCCCACACGACCCCATCACCGTCATTTATCATTGAGCCAAAATCGAGCGGCGAAGCATAAGGCCAAACCCCAGGAGTCGCTCGCGCTACAAAACATGGCGTCCCAATGCGACACAAACTATGGTACACTAGATGCATGGGTTCAGATTGCGTGCTTGGAAGCAACAATTCAAGCAGCCGCTCGAAACAGGCGCATTTCATGGCGTTCCAATGCGCTTGCGAGCGTCACT # Right flank : GTTATTGGCGACTCGGAAAAGACGACGCCCCACTGGTTCCAAAAGCCCCAAATCCGCCCGGCGGATTGAAACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAAAAGCCCCAAATCCGCCCGGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-8.10,-8.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //