Array 1 427774-425802 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGIPR010000001.1 Chryseobacterium jejuense strain CC143 Ga0451200_01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 427773 47 91.5 30 T..CAA......................................... GTGCGTGTTAGATTCTAGCCTTAAGGGAGT 427696 47 100.0 30 ............................................... CTATTCATTTCGATTGTGGTTTAGTTTATC 427619 47 100.0 30 ............................................... TTTGGGATAAGCCTTGTATTTACAGGCCGT 427542 47 100.0 30 ............................................... GGAGTTTGAAAATGAGTTAACGGAAAGTGA 427465 47 100.0 30 ............................................... TCTTTGAACTTTTTAGGATCATAAGATGAT 427388 47 100.0 30 ............................................... GCGTAATGAATACTACGCCCTTAGTGAAGC 427311 47 100.0 30 ............................................... GCCGTCTTTATTCACAATTACTTGCCAGTA 427234 47 100.0 30 ............................................... TGAAGGATATATCAACCAGGAAGAATATCA 427157 47 100.0 30 ............................................... GTCCAGAAAGAATTCCTTGATCGGGATGGA 427080 47 100.0 30 ............................................... AAAGCGAAAGCAGTTCAGGCAATTAATCAG 427003 47 100.0 30 ............................................... TTAGATCCAAGTTTTCCTTCAGCAACTTCT 426926 47 100.0 30 ............................................... ATGTCCCGACAACTCTTTTGTGTATCTCGT 426849 47 100.0 30 ............................................... CTTCAGCTGTATCTGATCAACGGAAAAACC 426772 47 100.0 30 ............................................... TCTCCGTATGATATTTATTCAATTCTTCCG 426695 47 100.0 30 ............................................... AATGAAATTATGATAAAGTATGCAGTATTT 426618 47 100.0 30 ............................................... TTTTGAATTGAAACTAATCTTTTCGCCTTC 426541 47 100.0 30 ............................................... GAAACAAGAAAACTTAATAATGCCTTTAAA 426464 47 100.0 30 ............................................... GTAACTCCATTAAGGCTTATTGACAACATT 426387 47 100.0 30 ............................................... TAGAGAATGTTTAGAATTACTAACCAAACT 426310 47 100.0 30 ............................................... GGGATTGATGGAGATGTTCCTGTTACTGCT 426233 47 100.0 30 ............................................... GATTTAGTTGTTATTAATTATTTACTGTTT 426156 47 100.0 30 ............................................... GGAGTATTATTTATTCATCAAGTTTGAATA 426079 47 100.0 30 ............................................... TTCTAAACTTTTCTCATCGCTGTACTCCCT 426002 47 100.0 30 ............................................... GCCAAAAATTCATATTGTTCCACTGATAGC 425925 47 100.0 30 ............................................... ATAATAAAGAAAACACCAGCGAGGAAAAAA 425848 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 26 47 99.7 30 GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Left flank : AAAAAAGTTTATTGTTTTCGGGTACAAAAATAGAAAAACCTTATGGGGCTTCTCTTATCATACATCAAGAAATGTAATTTTTCTTACCAACGTTAGAAATTATAACATGGTAAAAAATAAACGAAAACTGGAAATATTTATTTCATCATACTATTTTTTTTCTGTTTGCTTTAAAGACATCTTGAGATATTTACAAAAATATCCTTATGTTAAATCCCTAAATAAAGAATAATTTATATATTTAGCACTCACAAATTAAAATTATACCATGAAGAACTTAAAAAGAGTTACAAGAGATAACTTAAAATCTATTAAAGGAGGAGTTGATTACTGCCCAGCGGGCTATTTGCATACTTGTGACGATATGGCTATATGTGATCCAGAGCTTGGTATACCTTGCTCTTGCAGATGTATTCCATATGTACCATAAATAAGGTCCCCCGGTTTGGATTACCCCCAACAAGTTAGACACTTTTTAGGGGTATTTTTTCTGTATTCTT # Right flank : CTCAAAAAACAATCTACTGAAAATCAGCAGATTGTTTTTGTTTTTAGGATTTTAAAATTAGAATAATTCAAGCTGTTGAAAGGTTGGAGGCGGTTCTTCTTTATTTCTGGCAAAGAATATTTCAATATCTCCAAACTGCTTGTCAGTGATGCACATAATAGCCACTTTACCGGCTTTTGGAAGCATAAACTTCACTCTTTTAATATGAACTTCAGCATTTTCACGACTTGGGCAATGCCTTACATACATTGAAAACTGAAATAATGTAAAACCATCATCCAGCAAAGATTTACGAAAGCGGTTGGCATCTTTCATATTGGCTTTAGTTTCTGTTGGCAAATCATATAATACTAAAACCCACATAATTCGGTAAGCATTAAACCTTTCGGCATTCATATCAGTTCAGGATAAGAGATCAGGCGTTTTTCTCCCGTATAACATTTATACAGTGAGGTAGCTGTTGTTTTCACCGCAACCAATAATGGTCTGGTTTTATCATC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.60,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.5 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //