Array 1 189645-188619 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JACZFS010000017.1 Nisaea nitritireducens strain DSM 19540 Scaffold1_17, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	================================	====================================	==================
    189644	    32	 100.0	    35	................................	ACTGCGCCGCCGTCAGTCGGTGTGTTATTGGGTGT 	
    189577	    32	 100.0	    34	................................	ATGAACGAAGGCATTCACCTAGGTACGGATAGCT  	
    189511	    32	 100.0	    36	................................	ACCGATTACACGGGTGCGCTCGACCGGCGCATGAAC	
    189443	    32	 100.0	    34	................................	TGATACTCCGGCGCTGTGAAGGCCTCAACGTCCG  	
    189377	    32	 100.0	    34	................................	CAAGGCAAGTAGCCAGAACGTATCTCAAGAAACA  	
    189311	    32	 100.0	    33	................................	AAGGCATCCTACGGACACCCAGGCGAGAACTTC   	
    189246	    32	 100.0	    35	................................	GCGCACGAGGGGCTCGACTTCGACGCGCAAGGATC 	
    189179	    32	 100.0	    34	................................	CGTAATGACCTGCATTCAGGCCGACCCTACGCAT  	
    189113	    32	  96.9	    35	.......T........................	CGGGTATTCGAGCACGAACCCGTACCTGCCAAAGA 	
    189046	    32	 100.0	    35	................................	GCTATAAGGCAGGGCACGCAAACAACGCCTCTGAT 	
    188979	    32	 100.0	    35	................................	AGGTAGATGAAGCGGTCCTGATAACCCTGCCGGAA 	
    188912	    32	 100.0	    33	................................	TACTACGGCCGGTGGCATGCCCTCGGCGGCCTC   	
    188847	    32	 100.0	    33	................................	CAGCGCGTCGAGATCCAAGCCCTCGATGGCCTC   	
    188782	    32	 100.0	    35	................................	TACCTAGTGGACGGCGGCACCGACACGCGAGACAG 	
    188715	    32	 100.0	    34	................................	GGCCACCACAGACCGCCAAAACCGCCGCCGTCTT  	
    188649	    31	  96.9	     0	..................-.............	|                                   	
==========	======	======	======	================================	====================================	==================
        16	    32	  99.6	    34	GTCGCCCCCTTCGCGGGGGCGTGGATAGAAAC	                                    	       

# Left flank :   ACCTACGATGTGCGTACCTCGGAGGAGGACGGCCCCAGGCGTCTTCGCGCCGTCGCGAAAGCGTGTCGCGATTATGGCCAGCGGGTACAATATTCCGTATTCGAGATTGAGGTCGACCCGGCACTGTGGACAAGGTTGAAGGCTCGGCTTGAAGCCGTAATCGACCCTGAATTCGATAGCCTGCGTTATTATTATCTCGGCGCCAACTGGCAGCGTAAGGTCGAGCATGTCGGCGCAAAGCCCACAATCGATCTCGGCGGCACGCTGATCGTTTGACCACTCTACTCTGTTGGCGGCGCATGGGAAGATCGGTGCGAACCTCAAGCGTGCCGCAGAATGCCGACGGGTTCGCACCAAACCTCAGTTATTTGAAATTGTGAGATTTTTTTCCAAGGTCGCCCTCGGGGCCGTCTCCACGACCGCATAGGCAGTGTCGCCGTGAAGAGTTCGCGGATATGACCGACTTTGCGCATGTCGCACAATAAGTTACACGACATGCG
# Right flank :  GTCTGAGCAGTGCCCACAAGCGGAAGCTTCGAAAAACGATGACCGTCCGCTTCCCACCTTGCAGAGCCAGATGGCCCATTGGCTGGCAGCGACCCGGAGGGACCAATTGAGGTGATAATGCGCCTAGTTGCTATGGAGAGGAGTGAAGATCCGCCTTCGGACTCCTCTCGCGAGCGCTCAGCGGGTGAGCACCACTACCGCGCCTTGAAGTTTCTCGCGGATTATCTCCGAGCCGGAATATACCTTCTCATCAATGGAAGTTTCGCTAAGCAGCTGCGATGCGCGATTTAGCTGGAAAACGAGCGCCACCTTCTCAGGCTGTGTCAGTGCCTTCGAGCGAATTTCCACAAAAGCGGGGATTTCGCCAATCACTTCAATCGCATAGTGCCGATGGCTCTGATCCGCGATCATGTCCGTCACAGTATGGATGGAGGATAGAATCTCTTCGAAACCTTCGACGAGGTCGCTCTGACTTTCAATTTCCTGCAATAGGTAGATGC

# Questionable array : NO	 Score: 6.24
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCCCCCTTCGCGGGGGCGTGGATAGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [5,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-7.20,-7.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [43.3-50.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,4.91   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
//