Array 1 342765-343508 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAHRGC010000003.1 Prevotella copri strain HDB01 HDB01_3, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    342765	    36	 100.0	    30	....................................	TAAATAAACGAATCGTCCAGTATAAAGAGC	
    342831	    36	 100.0	    29	....................................	CAGGCGGTATCATATCTGCTGTAAAGAGT 	
    342896	    36	 100.0	    29	....................................	TGAAAGAAACGGAGATAGAAAGTTGAGAT 	
    342961	    36	 100.0	    28	....................................	TCTGATACCTGCGGTTCTGTTGTACTCA  	
    343025	    36	 100.0	    28	....................................	GAGCGAGCCAAAAATCAGAGTAACTTTG  	
    343089	    36	 100.0	    30	....................................	TGGAGTAATCTTCAACGCTACATTGCGGAA	
    343155	    36	  97.2	    29	...........................G........	TACAATCGGCTGTTAATGGTTATAAGACG 	
    343220	    36	  94.4	    29	..T................A................	GGCAATGCCAAAAAGAAAGCCGTCGGCAA 	
    343285	    36	 100.0	    27	....................................	CACGGTAAAAAGCCAAATGATAGAGAG   	
    343348	    36	 100.0	    27	....................................	TGCGGTGTCGGCTTCTCCGTCCGCTTT   	
    343411	    35	  88.9	    27	...........C..-........C...G........	GCATTGCCCAAAAGAGGCATAAGGCTA   	
    343473	    36	  83.3	     0	........ATT.C.C.C...................	|                             	
==========	======	======	======	====================================	==============================	==================
        12	    36	  97.0	    29	GGCTAGTATGCTTCAATAATTTCTACTATTGTAGAT	                              	       

# Left flank :   CGTTGTTTTATGGGTTGTAAGTCTGTAAAAGAGTATCCAATATTTGAGTTTTAAATGATAATTGTTAGTTATGACATATCGGATGACAAGATGCGTACCAACTTTTCTAAAATGCTGAAAAGTAATGGTGCCATTCGTCTTCAGTTTTCTGTGTATGAGGTAAGGAATACAAAGAGAATTGTGGATAATCTTGTGGCTAAGATAGAGGCTTATGCTAAACACTTCACAGCAGATGATAGCATAATTCTCTTTGATGTTGATTCAGATAAGCTTACTAAGTATGGTAATGCGATTCATTGGGACCAAGCTATAGCCTATTTCTGACTTAGCAAACCTTGGTCTTTATATTTTTGTAATAAAGCGCGTAACTTGCTTATTTACAGGTATTTCTTTGAAATATTGTACCCAATATTATGGGAAGGGGTGGTAATACTCTTTAAAAAGATATGCAGAAGATGCCTTTATTTAAAGGATTTTTTGTATCTTTGCAATCGATAAGA
# Right flank :  TAATTCCATAAAGGTGCGATTTGGTTTATAGCCTGAAGGCAGAAGTTACATCTTGTTGAAGATGGGTAAAGAAAAAAGTGGTTGCTCGGAAATTTCGAACGCCTCGCCTTTACTGTGTTGGCTATCGAGGCTTCGGCACAAAAAATGGGTATATAGCCGTCTGAAATGAGAAAGCGATTGGATAAGGTGGGGCTAATCAAGAGTCTCATCCAAGATTGCTATGACACTCTACATACCGAGAGCCGGGAAGCTGTGGCAAGTGATGTGGTCGAAGCTCTTAAAAATTGGGAAAGAAAAGAATAATGGAAAAGCAAATATTATATCATTGTTCATTTTAAGCCAGGAGATAGTTGATAAGTATTTACAATTCAAATCATACGAAAGGATATAATTATGTTGGATTTCTTATTATGGAATAAAATCGCTCGTATCATAAAGCAACTAGCCGATACGTTACATATATCAACCGACAGAGCTTTACAGATATTCTATGACTCTGA

# Questionable array : NO	 Score: 3.08
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GGCTAGTATGCTTCAATAATTTCTACTATTGTAGAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-0.90,-3.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-12] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [71.7-61.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.68,0.37   Confidence: LOW] 

# Array family : NA
//