Array 1 1532953-1533643 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP060733.1 Enterobacter roggenkampii strain Ed-982 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 1532953 28 100.0 32 ............................ TGTTCTCGCTGCAACCCACGGTTCTATACAAG 1533013 28 96.4 32 C........................... GTTTATTCTGTACCTGGTTACATCGATCACTT 1533073 28 100.0 32 ............................ CTGTTCACCGAGATGGGCGAGTGTAGGCCAAT 1533133 28 100.0 32 ............................ GTTGAGCTTGGCCTTTTGCAGGGCTCTGGAGA 1533193 28 100.0 32 ............................ CTCCTCTGTTCGTCAGCATTTCGAACATGATC 1533253 28 100.0 32 ............................ GAGTTAAACTCATATGAATTAAACGGCGTTAA 1533313 28 100.0 33 ............................ AGTAGAGAGCGCACAATACATCAACACCCTGCA 1533374 28 100.0 34 ............................ ATGGACGGACTGCGACAGGATGGACAATATAAAC 1533436 28 100.0 32 ............................ TGATTTAATTTTGGCTGCATCAGTCGGGTCGA 1533496 28 100.0 32 ............................ TTTAATTACTGTGTTTGAGGCGGGAAGGGCGC 1533556 28 100.0 32 ............................ AATAGCCACGCTACTATCTGCGCTGGCCTGAC 1533616 28 96.4 0 .........A.................. | ========== ====== ====== ====== ============================ ================================== ================== 12 28 99.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGGTTTGCATAAGCTGTTTGGTGGGGTTGGCTTTATCAGCGGTATGCTTGTGGAGAAAGGGCTGCCGGGGTTTATTGCCTACGGCGTGTTGATTGGCGAAGTGGTGGCGCCGATCCTGATTATTGTCGGGCTCTTTACGCGCCCGGCCGCGCTGGTGCTGGCGTTAACGATGATCGTGGCGTGGCTGATGGTGGGATTGGATGAGACATTCGCGCTCGACAAGGTCGGGGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTATCGGCTCGCTGGCAGTGGCGTTTTTAGGGGCAGGGCGGTTTGCGCTGGGGAAAGCACCTGCGTGGCGGTAGGGGTTGGAATCTGTTCCGAGGGAAGGGGTCTACGGACCCTTTTTTATTGGTGAGTTTTAAGTTGTTGATTTCACAACGGTGAATTGTTGGTGGGGAAAAAAGGGTTTACGGAGAATTTTAGGGGGATTTCTTTATATCACAAGAAGATAGGTGTAGATTGTTCCA # Right flank : AGCACTTCAGCCGGGTAAGCGTCGGTGGTTAGGGTCGAATGCCGAACAGGTAGTAGGCACAACGTAGGCCAGGTAAACGCAGTGCCACCCGGCAAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACGAACGAACGTTTATTGTTTATGCGAGGACCAGATCGCCCTGCGGATGGCACGAGCACGCCAGCACGTAACCCTCGGCAATTTCCGCGTCGGACAGCGTCATGGTGCTGGTGACGGTATACTCCCCGGAAACCACCTTTGTTTTACAGCAGCCGCACACCCCGGCACGGCAGGCCGCCGCCACCGGTACGTTGTTGCTTTCCAGCGCCTCCAGCAGCGTCGTGCCCACGCGGCCAAAGAAGGTCTGCGCAGGCTGCAGTTTGGTGAACTGAATCCCGCTGGTTGCCGCTTCCGCCACCGGCGTGAAGAACTGCTCTTTGAAGAAACGGGTCACGCCGAGCGCTTTCACGTCTTCTTCCACGATAGCCATGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1549327-1550558 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP060733.1 Enterobacter roggenkampii strain Ed-982 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1549327 28 96.4 33 ..T......................... CGGTTGGTCCTGTCCGTTTTGAGTAATGATGTT 1549388 28 96.4 32 ..T......................... TCGGAAGTTGCACCGATGCCCTGCGAACCTGG 1549448 28 92.9 32 ..T.......C................. ATTCCTCGTATGTTGCTTCGAGAAACCAAAGA 1549508 28 96.4 32 ..T......................... TGCTTAATAGGGCGCACAACATCGTCGTCACC 1549568 28 96.4 33 ..T......................... GCAGGGCGTAACCATCACGATCACTGCAATGAC 1549629 28 96.4 32 ..T......................... GGCAGGAACGGAACTACAGCGCGACGATCAGG 1549689 28 96.4 32 ..T......................... TTGTTCAGAGTCGGAAGCTTGTCAAACTTCTG 1549749 28 100.0 32 ............................ TGGATATATTGACCACTTCTGATTATTCTTTA 1549809 28 100.0 32 ............................ GTCGTGGTAAACGCCATGACTATTTCACATCG 1549869 28 100.0 32 ............................ AACGGGAGTAGACCGTATTTCTGTTTCCGCGC 1549929 28 100.0 32 ............................ TTCGAGGGTTATCAGGAGGCTCTCAACCGCAT 1549989 28 100.0 33 ............................ AGAATTTAGTCCCATATTCGCCACAACCGAAAT 1550050 28 96.4 33 ....................G....... AAACCGTTTAATCTGGGATAACTGGCAGAAATT 1550111 28 100.0 32 ............................ TATTGGCCGTTAATCGCCTCATTACGCAAAGC 1550171 28 100.0 32 ............................ GTGTCGAAGCGCTGATCTGTCAGGTCAAGCCA 1550231 28 100.0 32 ............................ GTCCACGCAGGCCGCAAGACCTGGGAACAGAA 1550291 28 100.0 32 ............................ ACCAGCCGCGCTTCACCAGCATCGGCTCCAGC 1550351 28 100.0 32 ............................ GTACTCGATACCCTCAAAACCGAATTTAAGCT 1550411 28 92.9 32 ..T.T....................... GCTGGAATCAAAGTGATGGAGTGAGTATAAGG 1550471 28 85.7 31 A..........C...C......C..... ATAGAAAATAAGGCCTAACAGTCCTCGGACC C [1550495] 1550531 28 75.0 0 ........T..A....A....CCT...G | ========== ====== ====== ====== ============================ ================================= ================== 21 28 96.3 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TCCCACAAACGCAGCCCGTATGTCGTTGCCTTGGGGCTTATCTGGAAGAGGTAAAATCCGGCCTCACAGAATCCATGCGTGATTTTCAAGTGGTGGAATTTGAGGACGAAGCGGAAAAACCGCGACAAAAAGAGTGGTTGCTGGAAGATACAGAAACGAAATGCGACTACTGCCGGGCGTTAAACCATGTGCTGCTGGTGTCGCATTTTGACTGCGATATGTTGCCGCACCTGACGGGGTTGCTGCATGACATTACGCATTCAATGGCCGCGGATGTCGTTGCACCTCAAAGTGCAGAAACGGTAATTCATATTATTTCCTGAGTGCTATCTGAGGCGTCGGGGGTGTTCCTCTGACGCCATTGGTTTAAACCCTTTTTTCTGATGCTTACGTAACCTTTTGATTTATATAATGCGAATTTACGAACCAGAAAAAAGGGTTTTATGCGGGAAAGTTGATTATTTTCTTTTTTAACAATAAGATGGCGCAGTTTCCTTTCA # Right flank : GCTGGAACGAACGGCTAAATAATTGTTCAAATAATCGACTGCGACACACAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGTAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTGAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACGGAAAGCGCATTCGTAAAGGGGATACAAC # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.74, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //