Array 1 427080-428179 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP053790.1 Streptococcus canis strain HL_77_2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 427080 32 100.0 33 ................................ ATCTAATCACTCTCCGTATAAATGTGTGTCCGT 427145 32 100.0 33 ................................ AATCCAGCTGATATTAACACTATTTTCCAATAA 427210 32 100.0 34 ................................ ATCTAGTAACGTCCGAAGTGTTGGTTGGGAAAAT 427276 32 100.0 34 ................................ TCAAAGTCTACGTCCTCCCAAGTTATACCGGTCG 427342 32 100.0 36 ................................ GTTAACGGATTGTTCGAACAATTTTTGGGAGGTAAA 427410 32 100.0 35 ................................ TTCGAGATGCCAACGGAAGAGTAACCTATTCATAC 427477 32 100.0 36 ................................ TTAAAATACAAATACACATTCGCTTGTACGTTGGAA 427545 32 100.0 35 ................................ TAAATCAACGTTTAGGTTAAAAACTTCAGAAAAAT 427612 32 100.0 34 ................................ CTGAGATTGACATCCAAAAAACAAAATCCAATGC 427678 32 100.0 36 ................................ ATCGCTTTTTTTGAGCGGTCTTTGTAACTAAATTTC 427746 32 100.0 36 ................................ ATCGCTTTTTTTGAGCGGTCTTTGTAACTAAATTTC 427814 32 100.0 35 ................................ ACTTCGTGGGGGAATTGAAAAACCTGTTGCATCGA 427881 32 100.0 35 ................................ GCAATATCACTTAAATCAGATTTGTAAGTCTCTAC 427948 32 100.0 37 ................................ AACGCTCAAACAGGGCTATCTGGTGGGGAATCCTATT 428017 32 100.0 33 ................................ AACTTCCGCAACTCAGCAACACTTAAGCCATCG 428082 32 100.0 34 ................................ TCCAATGTAAATACCTTTGAGTCGGTTAGCTGGA 428148 32 81.2 0 .....................AC...A..CTC | ========== ====== ====== ====== ================================ ===================================== ================== 17 32 98.9 35 GTCTCACCCTTCATGGGTGAGTGGATTGAAAT # Left flank : AAGGCCATACGAGGAGATTTAGAAAGCTATCCACCTTTTATGGTTTAGGAGATGTTATATGATGGTTTTAGTTACTTATGATGTAAATACTGAGACATCGGCTGGTAGGAAAAGATTACGTCATGTTGCCAAACTCTGTGTGGACTATGGGCAACGTGTTCAAAATTCTGTTTTTGAATGTTCTGTGACACCCGCAGAATTTGTGGATATAAAACACCGCTTAACACAGATTATTGATGGGGAAACTGATAGTATTCGCTTTTATTTATTGGGTAAGAATTGGCAGAGGCGTGTGGAAACACTTGGTCGCTCAGACAGCTATGACCCAGATAAAGGTGTCTTATTATTGTAAAAACGTTTAGTGCGACTCGAGGTTTCACAGAAAAACCTAGCTTGCTCGCGCAAAAATAACTTAAAAAAGAATCGAAATGGAGATAAAAAGGTTTAAAATGCCTCTGTATTCTCCAGCCGTTTCTCTATAAACTGTGTCATTTGGCGCA # Right flank : CCTATGTTTTTGGCAGTTCTGTTTTGTGATTTTCTCTGTTCACAAGTTTCCAACTGTTTTGTCTCTACTTTTTCTGTCCTATATGCTATAATATGCCTAAATAACTATGGTAAAGGAGTTAGGATGACTAAGGTTCGGTATGGGATTGTGTCGACAGCGCAGGTGGCCCCTCGTTTTATTGAGGGTGTACGCTTTTCGGGCAATGGCGAGGTTGTGGCGGTGTCTAGTCGGTCACTTGATAAGGCAAAGGCTTTTGCGGCAGCGCATCAGTTACCTAAGGCTTATGGTAGTCTTGATGACATGTTGCTGGATACGTCGATTGATGCTATTTATGTGGCAAGTATCAATCAGGATCATTTTCCTACAGCTAGGAAGGCTTTGCTGGCAGACAAGCATGTTCTCGTGGAAAAACCGTTTACCTTGACAACCGCTCAGGCTGAAGAGCTCTTTGCCTTAGCGCAGGAGCGTGGCTTATTTTTGATGGAAGCTCAGAAGGCTGT # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACCCTTCATGGGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.50,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 2 842260-842427 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP053790.1 Streptococcus canis strain HL_77_2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 842260 36 83.3 30 T..AACTC............................ ATTGACCAGTCCTGATGTGATGACTCTCAA 842326 36 100.0 30 .................................... TCAGCTTGTCACGGATACCTCTTGGATAAA 842392 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 3 36 94.4 30 GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : AGTTATTTTTCTTGGTCTCCTTTACCCAACTGTTAAGACTTTCACGCAAATGATCAAAACCAACAGTTTCTGGCTCATTCAAAAGCCTTTAATGATGGCAGCTTTGTTTCCTCTTATAATTGGCCTAACGGCCAGCTTCATTGGTTTTGATCATTTTTTTATCCTCTTTCATAAGATGCTTTTTGTAGGAGATAGTAGTTGGCTCTTTGATCCACTGCAAGATCCAATCATCTGGCTTCTCCCTGAAGTTTTTTTCTTGCACTGTTTCCTTTTCTTTATGATCGTTTACGAAATCATTTTGTGGAGCTTAGTAGGCTTGGCAAGGAGGCAACGTCTTAATGTAGAATGAAATAAGGATTAAGAGATTCATTTTCTTAAAAACAAAAAACAAGCGTCTTGAAAGCGCTTGTTTTTTTGTTTGCAGTCAGAGTAAAATAAAGATATAAAAAAAGCACCGACTCGGTGCTCACTTTTTCAAGTTGATTACGGACTAGCCTTAT # Right flank : CAGATAATACCGCTTGTTGTTGATCTTCGCTTCTTTCTATTAAAATGTTTTCATGTTATAATAGTCAAAAGGAGAAAGAGAGTGGAGCGATGGAACAAACATTTTTTATGATTAAGCCTGATGGGGTGAAACGAGGGTTAGTTGGGGAGATTTTGCGACGTATTGAGCGGCGAGGGTTTACATTTGAACGCTTGGAGTTGCGGCAAGCTAGCTCGGAACTCTTGGTTAAGCATTATGAGGCCTTGGTTGCGAAGCCATTTTATCCTGAGTTGGAAGCTTACATGACCAGTGGCCCTGTTTTAATTGGGGTACTTTCTGGGAATCGGGTGGTTTCGTCTTGGCGAACCATGATGGGGGTAACTAATCCCAAAGATGCTCTTCCTGGCACTATTCGAGGTGATTTTGCTCAGGCTCCTGGTGATGATGGTGGCATTTTTAACGTGGTTCATGGGTCTGATTCTCTAGATTCTGCTAAGCGTGAGATTGCCCTTTGGTTTAAC # Questionable array : NO Score: 5.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [58.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 3 1125603-1125104 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP053790.1 Streptococcus canis strain HL_77_2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1125602 36 100.0 30 .................................... TCAACTTGCCGTCTCCGACCTTTAACCTGT 1125536 36 100.0 31 .................................... TAATTTATTTTTACAGAAATAAGACTGATAG 1125469 36 100.0 30 .................................... TATAAACAATAAGGGCAACTACAGCTATTA 1125403 36 100.0 30 .................................... CTATTGACCTTGATTTATTCAATGCAGAGC 1125337 36 100.0 30 .................................... CATCTTATTGTTTAGCGGTCAATTAACCAC 1125271 36 100.0 30 .................................... GCTACAAAACCAAATCGACCAACGGGTTAC 1125205 36 100.0 30 .................................... GCAGTAATTTCTATTAACCCCAAATTTGTA 1125139 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 8 36 100.0 30 GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : CACAGCCTGACGACGTCCACAGCGAGCCTTGTTCGCCTTATAGTAATGATAGCACTCAGTTGGCTGAATGCCCTTGTTTGAGGAAAGTCACTACCTTATGAATGGTTTGACGGCTTCGCTTAAGTGATTGCGCAATTTCGAGGACAGAAGTATCTTTCTCAACAGATGCCTCTATCATTACGAGCTCATTTGTGGTAAGATGGGCATGGGTCATTTATGTTACTTCCTTTCAGACAAATGTGGTGTTTATCTGAGCCTAACATAGATGGCTTTTTCTGTCTAACTTAATTTTACAAATTGGGCACATAAAAAATTGTAAGGCGACAGAACAAAGGAGAAAAGAAGGTTTCATGCGTTTGTCGTGCTGGGATAAGAAGGGAAGTTGATTCTATAGGTTTTTTGGCGTATAATGGAGCTATGAAAAGGACTGTTTAAGACTAAAGTCTAGCTAAGACAAATAGTGCGATTACGAAAAATTGTGGACGAAAATAGTCTACGAG # Right flank : TTGACAAAATCACGGTTACCAATATGTTCGCCAAATTTCAAGTTCAAGTTAGCCAGTTTGTAAAAACTCTTTAGGAGATTTATAATTGAGTAGTTTCTGTGGGTAGTTATTAATCCCATTTTCAATAAATGCGACTTGTTGTTGAGTCGCATTTTTACTTCCCTTTGGTAACCAACGCCGAATGAGTCTGTTGTGATTTTCATTAGTTCCTCTCTCCCAAGAAGAATAGGGGTGAGCGTAATAAATATATTCCGAGTCAAAACCTTCTGCTAAGCGACTAAATTCAGTGCCATTATCAGCAGTGATTGAGCGAATCGGATAATCTTTTAGAATCCCTTCCAAAGCCTTGTTTACCAAATTAGCCGACTTATCAGGAATAAGTCGAATCATTTGGTAGCGGTTTTTTCTGTCTGTCAGCGTCAGTAGACACTCGTTTTTTGCCCGAGTTTGAATAACCGTATCAATTTCAAAATCACCGCTATGCTCACGCTTATTAATGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //