Array 1 103231-107352 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIFM01000002.1 Myxococcus llanfairpwllgwyngyllgogerychwyrndrobwllllantysiliogogogochensis strain AM401 NODE_2_length_140404_cov_38.8743, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 103231 37 100.0 33 ..................................... CGGGAGATGGTGGTGGGCGGGAAGGTGAAGGTC 103301 37 100.0 33 ..................................... ACGTCACTTGCCGTGGACGTGACCCCGGGTGAC 103371 37 100.0 35 ..................................... CTCACTTCCGGGTCAGCACCCAGGTTACCAATCAG 103443 37 100.0 36 ..................................... TTCGAGGAGGCGCGCGTCGCCACCCTCCTTCGGCAT 103516 37 100.0 33 ..................................... GTCAGCGGAGTCCAGAAGTGCGTCATCTGCGGA 103586 37 100.0 33 ..................................... GAGTTGTCGCTCAATCCCAAGCTCAGCGCGCGT 103656 37 100.0 32 ..................................... CCGGGCAGCGTCATGTACTCCATGACGAACGC 103725 37 100.0 36 ..................................... CGACTCCCCGGGCAGGGTGCAGGCTGAACGCCACTC 103798 37 100.0 36 ..................................... CTCCCGAGGCGCGTCCAGGAATCTGGGCCTCAGACG 103871 37 100.0 34 ..................................... TGCATTCTGGAGCTGCGCCCCGTGCAGGGGTGGG 103942 37 100.0 31 ..................................... AGCGTGAGCAGCGCGGCAGTAGCGCGCGTCA 104010 37 100.0 34 ..................................... AACCCGAAGGGCACGGCTGACATCGTCGGACTCA 104081 37 100.0 35 ..................................... GCGACTCAGTGGGGAGACCTCGGACCGGTGTACGT 104153 37 100.0 34 ..................................... CTTGGGCTTCCACTCGTTGTTCTTGGCGGCGGGC 104224 37 100.0 35 ..................................... ACACGGTGCAAGCTGCGGCCATCCTCACGCACGAC 104296 37 100.0 33 ..................................... ATGCAGCCTCCGACTCAGCCGCGCTCGCGTGCT 104366 37 100.0 33 ..................................... ATGGCATGGAGCTGATCGTGGATGTCCACTTCT 104436 37 100.0 35 ..................................... GATGTAGAAGCCGTCCTCCGTACCGCAGCGCGGGC 104508 37 100.0 36 ..................................... TGTTGATGCTCCTCGGGATGACAGGGTCCGGAAAGA 104581 37 100.0 33 ..................................... TCCAGCGCCGCGTTGAGATGCGGCAGGAAGATG 104651 37 100.0 34 ..................................... GGTTCGCATGTGTCCATGACTCCGTACGGGGCAA 104722 37 100.0 34 ..................................... CGCGCGGCTTCAGCCGCCTGCCCCTGGCGCTGCA 104793 37 100.0 33 ..................................... TGCCAGGCCGGGGGCGAGCCGTATGTCTACGTC 104863 37 100.0 32 ..................................... GACCCAGGCACGCCGCTCGCGCTCGCGGCGGA 104932 37 100.0 33 ..................................... GAGAACGGCGATGCCTTCGCGATTGACGCCACG 105002 37 100.0 32 ..................................... AGAGTCCATGCGTACTTGTGGCAGCCGGGGTG 105071 37 100.0 34 ..................................... GAGTTGTCGCTCAACCCCAAGCTCTCGGGCCACG 105142 37 100.0 35 ..................................... AAGTTCGGCGACCCACCAGAGCCCATTCAGCATTT 105214 37 100.0 34 ..................................... TACCTGAATGTGAACTTCGCGACCGCCATGTCGA 105285 37 100.0 33 ..................................... AACGCGGGCCTGACGGCGAGCGCGGCGACGATC 105355 37 100.0 33 ..................................... CGGGCTCGAACACGAACAACGCCAGCACCAACT 105425 37 100.0 36 ..................................... GATGTGGACGTGGACCCGGCCAAGTCGCGCTGCGAC 105498 37 100.0 31 ..................................... GGGATGTGGTGCATGAGCGGGACAGGTTCAA 105566 37 100.0 32 ..................................... TGAGGAGTGCCACTCCGGGAATCCCCGGAGTA 105635 37 100.0 36 ..................................... GCGCGAGCGTCGACGAAGCCGAACACGCTGCGCCAC 105708 37 100.0 35 ..................................... AGTAGTCAGTAATCAGGGCTCGCCGAGCCAGCACG 105780 37 100.0 35 ..................................... TGAGCGTTGAGCTCCGTGCCGCAGTCCGGACACAC 105852 37 100.0 32 ..................................... CTCCGCAACCGCCGCGCAATCAGTCGGTGGTG 105921 37 100.0 33 ..................................... TGCGCGCGGTAGTGGTGCTCGATTCCGAGCATG 105991 37 100.0 35 ..................................... CCTACGCTTGTCGTCCCACAGCGTGGATTCCACGG 106063 37 100.0 33 ..................................... ATCGCGCGCCGCCTTCCCGCTCCGCCACGAGCC 106133 37 100.0 34 ..................................... GCCTTGGTGGACGTGAAGATGAAGGCCAGCACCT 106204 37 100.0 32 ..................................... TCCTTGAGAAATGCGGAGCTCTTTGTGTCCCA 106273 37 100.0 33 ..................................... AGCTCGCGCTCGCGCTCGACTCCTTCGTGATGA 106343 37 100.0 38 ..................................... AACGTCTCGCCGCTCTTGCGACCTCTGGGCTCCAACCA 106418 37 100.0 34 ..................................... AAGTCCGGCATCCGTGCCTGCTGGAACGTCGTCC 106489 37 100.0 32 ..................................... TGGAGCTGCCATGACCAAGTACTCGAAGGAGT 106558 37 100.0 33 ..................................... CGTGCCCGCTGCGGCGTACCAGCAGCCCCCCTG 106628 37 100.0 34 ..................................... GCCATCCCACGAGGAAAGCGCCGCGCCGCCTGAG 106699 37 100.0 33 ..................................... GCGGCAAACCTGGTGGAACTCGGAGTGGAGGCG 106769 37 100.0 32 ..................................... CAGGGGAACATCGTCCGCTTCATGGAGAAGGT 106838 37 94.6 35 ...............T......C.............. CGCGTCGCTGACGTTGAGCGCTACCGGGCCGACTG 106910 37 97.3 33 .....C............................... ATGGGCGGGCGCGGTGCAGGGAAGACGTACTCT 106980 37 83.8 17 ...A................C............GTGG TGAACCTCTTCGCCAAA Deletion [107034] 107034 37 94.6 33 .........T..........................T GGGTCATCTCCCGTGAAGACTGCTACCTGGAAG 107104 37 94.6 34 ...............G....................T GTCCAAAGGATGCAGCGCGCGCCCTGGTGGTCCA 107175 37 97.3 34 .................A................... GCGGAGAATGGCAACGGCGGCTGGTGCTCGGGCT 107246 37 86.5 33 ....T........T.T............AA....... ATCGAGAAGGTCATCGCCGCGCTCAACGCGAGG 107316 37 81.1 0 A..A............TAA.A..............T. | ========== ====== ====== ====== ===================================== ====================================== ================== 59 37 98.8 33 GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC # Left flank : AGAAAGGTCACCGTGCTCGTGTGTTACGACGTCCGGGTCTCCGACGCGGAGGGGCCACGGCGGCTCCGGCGGATTGCTCGGGCGTGCAAGGACCATGGCGTCCGGGTGCAGTATTCGGTCTTCGAGTGCGTGCTGGAGCCGAAGGACTGGGTGGTCCTGCGCGCACGGCTGCTCGCGGAGCTGGATGATGCGAGCGACAGCCTGCGGTTCTATTTCCTGAGCGAAGATGTCGCTCGGAAGACGGAGCATCATGGCGCGAGGATTCCACTGGATGTCGAGGGACCGCTCATCCTCTGAGTTGCTCGCGTGCCCTGAGTGGGGCGCGCGGACCTGTGCTGGTGTGGGCTCCGTCGGAGGTTCGCGTTCTTTGAAAGCTCCAATAGTCTTCAGAGGTTGCGCGGGCTGCGGAGCCGCCGACTCGGGCTGGGTGACTCGAGTGGAGCCAGGTTCGCGCGAAGCGGCTGGATTCCCTTGGAGTTCTGGTAGCTTGGACAGGCAGA # Right flank : CACCGTGGCGAACGGCGCGTCGTCCAGATGCTCCAACTCGTGGTGTCGGTCCGCGCACCCTTCGGTCAGCACTTTCACCCTGAATGTCCTATGGGGCCAGGGCTCGAAGACGAAGCGGCCTTGCTCATCCACGAGGGCCCGCACTTCGCCCGGCCCCGCCGGGCTGACCTTGTCCACGGCGCCTGGATGGGCTGGCCCTCCTTGTTCCTCGCCGTGCCGTTGAACGGGCCGAGGGAGTGGAACTCGATGTGGACCCCGGTCTCCGGGAACTCTTCTTCCAGCGTCACACTCGCGCTGCCTCGTTTGCGCGAGGTGCTCGCCGCTCACCCGGGGCCATGCCCTTGCCTCAGGAGTCCGTCCGCCTCCGCCCTCATCTTCCTGAGGATTCGAGAGGTGGCCGGACTCCCGTGGCCTGCTCCGGTTGGAATCGTCCCGCTGGTCAGAGATTGGCGGCGAGCATATCGAGCAGCGCGCGGACCTCGAGCTGTGCCGTGCAGTCG # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.10,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-26] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //