Array 1 41134-39955 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGGG01000002.1 Streptococcus sobrinus TCI-53 contig00002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 41133 36 100.0 36 .................................... TTTGTCTCTTGTCTATTATAGTTTACTCTGGTCAAA 41061 36 100.0 36 .................................... TAGTGGGCTGTATAACGTTCGTATAACGGTAGGCTT 40989 36 100.0 35 .................................... TTAACTGCTGAAAACAGTTCGGTGTTTTTCATTTC 40918 36 94.4 34 ...............T...T................ GCGTCATCGTTAGGTTTAACCTTTGTATGAGACA 40848 36 97.2 34 ...............G.................... TGTTCAGTGTCCGGGTCATAGATTTTTCCGTCAA 40778 36 94.4 35 ......A..........T.................. AGTAATTCTTCATGGTCTTTATCACTCATCTCATG 40707 36 97.2 35 ...............G.................... AATCCAACAAACGTTCCATGTTCTGTCATACCTTT 40636 36 97.2 36 ......A............................. CCTTGCCAGCCTTTTGACTGGCTCCTTTCTTTATCT 40564 36 94.4 36 ............G..T.................... CATATAGTTCATCATGTAAGGGACTCGTCTTAGACC 40492 36 97.2 35 ......A............................. GCTTTGATGTAGGTTGCGATTGGTGAGATGTAGCG 40421 36 100.0 36 .................................... GTGAAGGCTTTTTTGTGGTCCTCAACAGCTTCTAGG 40349 36 94.4 36 .......A.......G.................... TTTACCTTGGCCAATCTTATGTTAGCCCCTTTCCTT 40277 36 94.4 36 .......A.......G.................... TTGATTAAAGATAGCCGTCACTTCTTCGGTTTGTTT 40205 36 100.0 35 .................................... TTGTCATTCATAGGTTGACCGTTCGTTAGTCGTTG 40134 36 94.4 35 ........T...................G....... ATTAAAACTTCGCCTCGTCGGTCAACTAGTTCATC 40063 36 91.7 37 ......AT..T......................... TATAGAGTTAAGGCCTTGTCGCCTCTACGAACCAAGA 39990 36 91.7 0 ...............T..............A....T | ========== ====== ====== ====== ==================================== ===================================== ================== 17 36 96.4 36 ATTGAATGCCCCATACCCTCGTAAGGGGACGGAAAC # Left flank : ACTCTCTGATAAGAGCCTTTAAAGAAAAAGATCCCAATTGCTATCTGGCTAGTTATACGAGGAGGTGAAGCCATGGGATGCGATTTTAATTTGACGGCAGAAGAACTGCTGTTTGCCAGAAATTATCAGCTCTACTGCCTAGTGATTTACGACATTGCAAATCAAAAGAGACGACTCAAATTGGCACGATTGCTGGAAGGCTATGGCAAGCGGGTTCAGAGATCCTGCTTTGAGGTAAAACTGAGCCAGAAGGTTTACCGTCGGCTGCTCCAGGCGCTTGAAGACTTTTACGAGGAAGATGAGAAAGACTGTATCACACTTTATAAAATTCGTCGGGAAGAGAGGGTCGTTTTCAACTCTTATGATGAGCCAGAAGAAGAGACACAGACGATTATCTTATGATTGCAAAACCTCTATGAACATGATAGACTGTTATCGGATAGTTTCAAGCTGAGGCACAAGATATAGCAGTGCCTGTCTAGACTGACACAAAATATGCT # Right flank : TATCACACCAGTGTATTTTTGCGATAGGTGAATCGCTTTCCTATCGCTGCTTCTGCAGGCTTAGACCTTTCAATCGGTTTTTTAGGAGAAATATCTTCAAAAAGGATTTGACTTTTATCGCCGAAAGGTTTATAATCAGCCAAAAATATAAATAAAAAAAGGGCGCCTTTGCGGTGAAAAATACTTTTCAGCCGGAGGTGCCTTTTCAAATAGAGAAATGATGAAAGAACTAAGATTATTTTTTAAAAGAACAGCTTTGCCGGCGAATGTGCTAGCGGTAAAGCTGCAGGGTTATCTGATGGGTCAGATTTCCGATGACTACGCCGAATTTTTGCACCAGCAGGAAACCAATCCCTATGCCTCCTTCGTAATAGATAGAGGGGATCAGCAAGTCTGGACGGTCAGTCTCCTGACAGAACAGGCTTGTGAGCAGCTTCAAGAAGGCTTGCTGTCTCTGCAGCATATTCGACTAGACTCTTATGCCGAGCTTATTAGCATTC # Questionable array : NO Score: 2.52 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.44, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAATGCCCCATACCCTCGTAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.20,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //