Array 1 36030-39244 **** Predicted by CRISPRDetect 2.4 *** >NZ_JEMQ01000008.1 Aeromonas sp. HZM contig8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 36030 29 100.0 32 ............................. CGACCGGGAACAGTGTCCTGTCGTCCATCGTA 36091 29 100.0 33 ............................. CCTATTTCGGCAGCGCACAGGCAGGGCAATTCT 36153 29 100.0 32 ............................. GATCATGTTGATGCCATCAACCGCGCCTGACT 36214 29 100.0 32 ............................. TCCAGGGCAGCGTTGGCAGAACTGGACAACAT 36275 29 100.0 33 ............................. TCCTTGAACCAGTTCATCACGGCGGTGACCAGC 36337 29 100.0 33 ............................. GTTATCGAGACGGCCCCACCTGGACGGATTGCC 36399 29 100.0 32 ............................. AAAATCACTTGCGACTTAATGAATCATTCGGT 36460 29 100.0 32 ............................. GTATCAAAGCGGGTAAGTGGAACCAGACCTTC 36521 29 100.0 32 ............................. CCGCTGCTCGAACAACGGGTGGTGATGTCATC 36582 29 100.0 32 ............................. TACCCTATCGCGTCGGCGTGAATAACGAAGAG 36643 29 96.6 32 ............................C ACCCTGTTTGACCTGGGCGACGACGCCATGGC 36704 29 100.0 32 ............................. ACGATCGCTTTATTCAGGTGTTGCGAGATTTT 36765 29 100.0 32 ............................. TTGGAGGACAAGGACGACGCGGTGCATAGCCT 36826 29 96.6 32 ............................T AACCGCGGTCGACTAGCGAACTACCGTAATCC 36887 29 100.0 32 ............................. CGTTCATTAGGATTCGTGGGTTCATAGATAAA 36948 29 100.0 32 ............................. CCTGAGAACTGGCGGAATGCCAGGGTGCTGCG 37009 29 100.0 32 ............................. TGGCAACGGTTGCCGACGTTCGATGCCTCCCG 37070 29 100.0 32 ............................. GAAATGGTCCAAGCAGAGGGCGGCCTGGCGAG 37131 29 100.0 33 ............................. CAGTCAGGACAAGGCCGACACCTTGCGCCGCAT 37193 29 100.0 32 ............................. GTCATGGACTGGATATTTAGCCCGCTTCTTCC 37254 29 100.0 32 ............................. ATGTCGTTCAGGCTCATTTGCGGGGCCGCTGC 37315 29 100.0 32 ............................. ACGATCACCGGGAAGGATCTCTCTGAGCGCGA 37376 29 100.0 32 ............................. CTGGGGGGTGGTGCGTGATGACCGCCCTAGCC 37437 29 100.0 32 ............................. GGCAAGGCCTGATCGACAACTACGAAACGATC 37498 29 100.0 32 ............................. GTGATCGGGTCAACAAATGTCCCAGTCACCTG 37559 29 100.0 32 ............................. ATGAGATGGGTTTCCGGTCTAGTGTCTGCCGT 37620 29 100.0 32 ............................. GCCGGTGATCATGGATAGAAACTCTCCTTGAA 37681 29 100.0 32 ............................. GTGGCGGACGTGTTCAAGGAGTGCGCCAAAGA 37742 29 100.0 32 ............................. CTGGCCATGCGCCAGGCTATCGCTGCAGATCG 37803 29 100.0 32 ............................. GTGGCCGTCTATGGTCGCGTGATCTCGTCTGG 37864 29 100.0 32 ............................. TTCGACAGCGGTATCTTTGTTTCAAAGCTCAC 37925 29 100.0 32 ............................. CAGTAAAAATACCGTTCATCGGCAATGCAAAC 37986 29 100.0 33 ............................. GGGGTATTCACCGCTGACGTGGGCGTGCCGCGC 38048 29 100.0 32 ............................. GCTACCAGCAAAAACATCACCATCCCCCTCGT 38109 29 100.0 33 ............................. AATACGTCGAGCAGCTCAAACTGTTGCTGCCCC 38171 29 100.0 32 ............................. CTCCCGCATCGGCGCCTGCAGGTTCAGGTCAA 38232 29 100.0 32 ............................. GGAGCAGCATCATGCCAGGGTTGCCAGCCGCT 38293 29 100.0 32 ............................. CAGACACCTCGAGGTTTCATCCTGACGAAGTG 38354 29 100.0 32 ............................. CGGGAGGGGATCCCGGCGGTCACTAAATGGGA 38415 29 100.0 40 ............................. AAATCACTCTGGGCGTTGAAGTTGCTGTTTCCCTGTTTCC 38484 29 100.0 32 ............................. GACAACTACACCAACGCGACTATCGAACCGCA 38545 29 100.0 32 ............................. GAGCCAGAGCAGATTATCCCGTCGAAACTGGA 38606 29 100.0 32 ............................. GAACACCCGGAGGGATACCAGGCGCTGCCAGA 38667 29 100.0 32 ............................. ATTATTACAGCAAATAGCCTAGAGATATGGGC 38728 29 100.0 32 ............................. GCGTTCTCTGGGCCTGCTGGCGCAGTTGCTGC 38789 29 100.0 32 ............................. CTGCCGATGGCGGCCTTGGCCGGACCGTCCGG 38850 29 100.0 32 ............................. ACCGACGTTTTCAACGCCGCGTCTGGTGGAAC 38911 29 100.0 32 ............................. CAGATCGCCATCTATAACGTTGGCGCTGACGG 38972 29 100.0 32 ............................. GGCATCGCCCAAGCCGGTCATCTGCTGGTCGA 39033 29 96.6 32 ..............T.............. CGCGTCGAATACTGGGGGTATAACGATGGAAA 39094 29 100.0 32 ............................. CCTGCTGTCGTGGCGGGTGAAGTCGCCGCCGC 39155 29 89.7 32 ........T....T.............T. TGGAACCAGACGTTCAGGTCCAGCATCAAGGT 39216 29 96.6 0 ............T................ | ========== ====== ====== ====== ============================= ======================================== ================== 53 29 99.5 32 CTGTTCCCCGCGCCCGCGGGGATGAACCG # Left flank : CCGCTTATCGAGGAGGTGCTCTCGGCCGGGGACATCACCCCGCCAGACGCCCCTGCAGATGTCCAGCCGCCCGCCATCCCCGAACCCGCCGGCATGGGGGATGCCGGTCACAGGAGTCAGTGATGAGCATGCTGGTGGTGATCACCGAGGATGTGCCGCCGCGCCTGCGCGGCCGGCTCGCGGTCTGGTTACTCGAGGTGCGTGCCGGTGTCTATGTGGGAGAGGTGTCGCGCCGGGTGCGAGAGATGATCTGGCAGCAGTGCGAGGCTTTGGTGGAGCAGGGCAATATCGTGATGGCCTGGCCCGCTAATAACGATTCTGGTTTTGACTTTCAAACCCTGGGGACCAATCGCAGGGTGCCGGTGGACCTCGATGGTTGCCGATTGGTCTCTTTTCTACCCATTGAAAATCAATAGCTTAGCGTTCATTAACAATCTGGACTAGTCGGTGGCTTTTCTATAGTTGGAAAAAGCTATCAAAATCAATAGCATCTGTTAAGT # Right flank : GAATCTCTTCGGCATGGCATGCTCTCGATTACGTGCTAGGGTAATCGTTCTGGCTGTCATTGTTTCATCAGCAGCGAGAGCTGATAGCGGACATTTTCTAACAGAGCAGCTTTAATTTGGCGCGTCGGGTTTCGATTTTGGGTGTCATCTGATCGCGTGTGTAATCACCCGTAACGAGACAAGTGAATTTTTTGACGAGCATTGAGCGGCGGATTTACACGCCTGCGGCTTTCCCACTCAAATCACCATGATCATTACCAACCCTAGACAGGACGTGGCTTTGCTAGTCGCCAGCCTTCTAGGGATAGGTGATCAGGTAAGGCTGATCTGATCAGATAAAGTGATCAGATCAGGCAACGCTGATCTGATTCCCCGATCACTTCCAGTGATCACTTCTCAGATTTTTTCCAGATACCAACCCCATGGCTCGTTTTGAAAACCTGCTTGGCATGAGATGAACTGCCAGCCAAGGTGGTACAGGTCATTATTCAAACGCCAAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCGCCCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCGCCCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //