Array 1 66726-67816 **** Predicted by CRISPRDetect 2.4 *** >NZ_RIAV01000001.1 Ectobacillus antri strain SYSU K30001 Scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 66726 32 100.0 35 ................................ CCAAAATCGCGGAGAAGTTAGGCAGCGTTTCACCC 66793 32 100.0 34 ................................ CATCAAGAAATACATGCTTAGCACAAGGGTATTA 66859 32 100.0 34 ................................ ATAGCTCAGATGCTCTTTTCTCAACTACTCGGCA 66925 32 96.9 36 ...............................A TCACGAGGCCGCTCTACCTGACCACATCATGGTGAA 66993 32 100.0 34 ................................ CTTTTGTAATCTTATTAACTTTTTCTTTAGTAAA 67059 32 100.0 34 ................................ ACTCAATCGTAAAGTAACAACTTGACGAGCCAAA 67125 32 100.0 34 ................................ GATGATGCGTAAAGTCTCCCACATGAGCGAGCTG 67191 32 100.0 35 ................................ AAGAGTACATATTTGCTCCATTTCAGAATGCTACC 67258 32 100.0 34 ................................ AATTTGTGGCAGAGCAAATTGAAGGGGCAAAAGT 67324 32 100.0 34 ................................ AAAACTCAAAGAATGGGGAGATAATGAATGACGA 67390 32 100.0 34 ................................ AAGAAAACAGGAGCAGATAAATTATTATCTACAT 67456 32 100.0 33 ................................ AGTTACAGCTCTATAAAGTCAGGAATTATTGCT 67521 32 100.0 34 ................................ AAGAAGCTCCATTAAGTTTGCATCTTCTTCATTC 67587 32 100.0 34 ................................ ATATTTTCTGAAACAAAAACAAAAGAACCGTAGT 67653 32 100.0 34 ................................ AAAGAGACTTTTAAAGCATCTAACTTTGTTGCTA 67719 32 100.0 34 ................................ AGTTTTACCCACATAATTGTGCTCTGCGTCAAAC 67785 31 84.4 0 .................C..G.T....-..C. | C [67799] ========== ====== ====== ====== ================================ ==================================== ================== 17 32 98.9 34 GTTACACCTTGTATAGGTGTATGGATTGAAAT # Left flank : GAAATACAAGAAAAATTCAGCTGTAAATCATGTGGATTCAATGCGAATGCAGATTACAATGCCTCTCAAAACATAGCTAATAGTATAAAATTCATTACCACTAATAAAAAGATAATTGAAGAATTAGAAGTTGAAGAAAAACAATTAAGTCTAGATTTTAATGGATCTTGATAATTTTGTTCTTTGATAAGTAAATAATGAATAGCCAATTATAGGCTTGGGCGGATTTGCGTCCAGAGGGTGAGGCAAGGTGTGATAGGATAACACCTGTATAGCACTCACCAAAGGGTTAACCTGTGACATTGTGTTACCGTCACAGCCTTCCATACATGTTTTATTATGCGAATTAGTAGTGAACATGAATTTACTGATACATTCGCACTTATTATTACATAGTTTTTGACTTTATTTTTTAATTACTTATGTATTTTGAATAAAAAGTGAATACCATATTCTATTTAATAATAACTTGCAATTATTGTTTTTATTAAAAAATCGCT # Right flank : TTACATTTCGCACCCTAGCTGAGTGAAAATGCCATCTTTTTTGCCTTTTTTTTCGAACAGGCAGGCGGTTTCAACACCTGTAGCCGTGACGCGATTCCTTTTTTCGCCACGGCTGTTTCTCATGGTTCATCTATACGTAAATGCTCTCCGTAAATCCAAGGGACTCTAACACACGGCGCTGTTCATACGTGAGCGGCTGGGCAAATTGACGATGCCTGGACCCATCCGGCAGGGTAAACTCGACCACCTGCACGTACCGAAATAATTGAAAGATCGCTTGCCCGGTCGGCCGCGTCAACGTTCGGCCGCTGGGCGGTAATGTGCTGGCGCAGCCGGCGCTGAAACACTCGGTATACGGCGAGGGCCAAAAGAAACAGATAGCCCATTACCCGGATCCTTTCCGCCTTTTTCAAATAGATTTCATCCGTATAAAAGGGATCTTTCAGGAAAGAGAAATTCATTTCCACGTTGATTTGCCCTTTGTACTGCTCCAGGATCGT # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACACCTTGTATAGGTGTATGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.62%AT] # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCATGGATTGAAAT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 265232-265397 **** Predicted by CRISPRDetect 2.4 *** >NZ_RIAV01000001.1 Ectobacillus antri strain SYSU K30001 Scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 265232 32 96.9 36 ........A....................... ATGGTCAAATTCCTTTTAGGAAATCCCGAATGTCAA 265300 32 100.0 34 ................................ AATTGCGCGCTCACTCATAAAAATGTTTTGGATG 265366 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 3 32 99.0 36 GTTACACCTTGTATAGGTGTATGGATTGAAAT # Left flank : CGCATTATGGAAACGTCGCCAATTTGAAGAAAAGCACAAACCCGTCATTCGAACAGACAATGGTCCTCAGTTCGTCTCTCGTGCCTTTGAAGAAGCCTGCGAAAATGTTGGTGTAGAACACGAGAGAATTCCACCTCGTACACCGAATATGAATGCACATATTGAGGCATTTCACAGTATTTTAGAAGAAGAATGTATGAAGAGACATGTGTTTGGGACGTATCGTGAAGCATACGAAACTGTAAGCCAGTTTATGCATTTCTATAACGAACGTCGGATTCATGCCAGTATTGGATATCGGCCGCCTAAAGAATTTTATGAATTAAGAAGGCAAGGAAACGCTGATACGGCTCAAGTTCGTGTGTAAGTAGTGAGGTAATCATCATTTGATTGCCTCACCAATAAAAACGAAGGAATTTGTAGGAATTTTGAGATTAGGTGAGATTTTAACTGGAAAGTGTCCAAATTCAGGGGGTTAACCCGCGCTCCTGTTGTTTTAG # Right flank : TGAAAAATGGTTCTTTCCAAAGATGGTTGAAATTCTAACAATTTGTCCATACTGTTCCTAATTATTTAAGTGAAGGATGGTGCCGTAAAGTGGACGATGTGGTGAAACTGTTAGATGAAAATCTTAGCTATATCTCGCATGAAATCATAGAAGATACACTATTTATTCGGGTTGCCTCGGAGAAGTTATCAGTAATATGCCCTTCCTGTAATACAGCTTCTACTAAAGTTCATTCTCGCTATGAAAGAACGTTTCATGATTTGCCCATGCAAGGAAAGAAAGTTGTATATGTAATCCATAACCGCAAAATGTTCTGTCACAATGTGCGATGCCACCGCAAAACGTTTGCCGAACCCTTTTTATTTTTGCCCTATAAAGCGAAAAAATCCACTCGCTTGGAACAAGAAATCATAAAAGTCGCTCAACATGTCAGTTCGCTCACAGCTGAAAGGATATTGAACTGCGGTATTGCGAAGGTTGGAAAAAGCACGATTTGCAGT # Questionable array : NO Score: 8.31 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACACCTTGTATAGGTGTATGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.62%AT] # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCATGGATTGAAAT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //