Array 1 25419-27586 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKON01000023.1 Ligilactobacillus ruminis strain BIOML-A8 scaffold23_size37635, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 25419 30 96.7 38 .....A........................ GTGGTTATCAGAGCACATGACTTCAAAGCCACAATCAC G,AG,T [25422,25425,25429] 25491 30 100.0 37 .............................. TCGAGCAGCAGCAACTCTTTCTTGCCCGGTGCCAGTC 25558 30 100.0 35 .............................. GTAGGCATTTTCCAGTTTACGTCTACCTATGTAGC 25623 30 100.0 36 .............................. GTCTAGCCAGTGACCATTATAGTTAATTGCATCCGT 25689 30 100.0 39 .............................. AGGAACCGCCTGCCGCAAACGAGGTTGCGCATCGCGCTT 25758 30 100.0 35 .............................. CTACCGCTCAGGTCAAGGGGCGTCAAGTCAACCGA 25823 30 100.0 36 .............................. TGGAATCGTAGGCACCGATGACGGCAAATTAATTCT 25889 30 100.0 36 .............................. GACATAATCGATTGCTTCGCTAAGATTGTCGGCAAT 25955 30 100.0 36 .............................. ACAAGTTGATGTTACCAGTTGCAAGGTTATGTCCGT 26021 30 100.0 35 .............................. GCATAGTAATCCTGCTTATAGTGCATATGAAGTCA 26086 30 100.0 38 .............................. TACGATATAGCCGGTTATGTTGTTATTTAACTAGTCTG 26154 30 100.0 37 .............................. CACAGGAAGATGATTTATATTTTCGTAAGGCTTATTA 26221 30 100.0 39 .............................. AATAGCAGGTTATTCTGTTACAAACAGTCTTGTTTTCAA 26290 30 100.0 36 .............................. GAAAATGGTTACGAAACTCATTCTCAATGGGGCTTA 26356 30 100.0 36 .............................. ACTCAACGTCACGAGAACACAGGTCATAACCGTATC 26422 30 100.0 37 .............................. ATTCAGCAGTTCTTTTTCCTCATCTTCAAGCTTGTTA 26489 30 100.0 39 .............................. CGGCACTCGCCTTGTTGGCGTCGATTGCCTTACGTATAT 26558 30 100.0 36 .............................. CATATCAGCAATCCGAATTTGATTTTCGTTGGTCAG 26624 30 100.0 37 .............................. TAGCATTCGTGTTATAGTCTGCATCATCATCATACCA 26691 30 100.0 37 .............................. TAATACCGTTCTCATTAAAACCATAATAATACGCCTT 26758 30 100.0 37 .............................. CAAGGTTACATTCTTGAAAAGCGTCAACAATGTAGGT 26825 30 100.0 37 .............................. TAATAATCCCGTCATAAGGATTGCCATAGTAAACGCT 26892 30 100.0 37 .............................. ATACATTGCTTGCAAAATGTGAAGAACCCATTGAACC 26959 30 100.0 37 .............................. AAATATTCGTATCGTTGCCAACATACTTTAGCGCATA 27026 30 100.0 37 .............................. ACGCCATTTTCAAGCGTCGCTTTTAGCTGGGGCATAA 27093 30 100.0 36 .............................. GATACTGCAGACGTCGGCACAAGCCAAGCAGACTTC 27159 30 100.0 35 .............................. CATTTAGCGTAAACTTTTGTTTTTTGTGTACACCT 27224 30 100.0 39 .............................. ATGAGTTAGCTAAAATCGTTGCTCAAGCCTTCGAGAAGA 27293 30 100.0 36 .............................. TATTACTAAAAGAGCCTATCCCTTGACCGAGTGGAT 27359 30 100.0 37 .............................. GGTCCAAAAATGCGACCAGTGGCCACGTCGCAAATGT 27426 30 100.0 35 .............................. AAAGACAGACTGACTACCGTTTTTTGCGATTTTTT 27491 30 100.0 36 .............................. TCATAGATCATTGTGCATACATAATCAATGACTTTA 27557 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 33 30 99.9 37 ATTTACATTCCTCATCAGTTAGATAAAAAC # Left flank : TCTCTTCTTGAGCTTTCGCAACACATTTCGCTCGGAGAACTGATCCACATCTACAAGCTCATGAGCAAGCGCAACCGCAAAGAAATCGCATCCATATATGACTGCAGCGCAAACGAGCTCATCAGTTGGATGGAATGCATCGCGCTTTACCGCAACTGCTGCTGTCACAACGGAAACCTGATCGATATCAAAATCGAAACAAGGCCCGTAACGCCCCGATCATATTCCAAATATCTTTTTCGCATGAAAAATACAGAGACGACAACGAACAGGTTCGCACTGGGCTGCGTTGTCATACTGCATTTGGCAAAAACAATCAACGTTGAAAAAGAAGAAACGGATGCGTTGAAACAGGCCATCTTAGCCCTTTCAAACGACAAGACGACGCTTGAATCCTATGGGTTCGTCAGTCGGGAAGGATTTGAGGGGGCGTTTGGGGAATGAGGCTAAAAACGATTTAAATTTATATGATTCCGTTGTTTTATTTTTTTATCGTCACC # Right flank : CTCCATAGCTTGAAAATACTAACACCACTATATATCTTAAGCGTATTTCTGTCAATGCAATAAAAATTTGAAGCTTATTTGATATATAATATGCTCGAACATCAGTAGATGCTTTCGTATCAGTAATTATAGAATCTGTCGAAACACCGTAATAATTTATTTATTACACATAGACAGATATATTAGAAGAAATTTGAAGTATCTGCGGATGTGTCCATACCCCAAAACTCTTTGATCAACCATTTGTTACTTCTGCTTTTAAAAATAATTATTGAATCTAAATCTTTATCTATCCATTTAGACAATTCTGATTTTAATTTATTTAATTTTGCAACTGTTAGTTCTCCCTCAAAAACAGAGTTCTGGATATGAGTAAGATATTTTTTACATATTTTAAAAACTCTTCTCATACGCCTGGACCCATTATTTTCAACGCTTATATCATAAACTAAAATTACATACAACTTATCACCACCAAATTTTAAAAGGAGAATATTCAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTACATTCCTCATCAGTTAGATAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 22957-23129 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKON01000029.1 Ligilactobacillus ruminis strain BIOML-A8 scaffold29_size23280, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ============================================== ================== 22957 27 96.3 46 ....................T...... TGAGGTGCGCGGCCTCGAAAGTAGAACAAAATCTCGAAAAATTGGA 23030 27 100.0 46 ........................... CGGCCCGCGCTGCCCTGAAAGTAGAACAAAATTTCGAAAAATTGAG 23103 27 96.3 0 .................A......... | ========== ====== ====== ====== =========================== ============================================== ================== 3 27 97.5 46 AAAATGTTCTACCGCTGCCTCCAAATT # Left flank : AACAGCATTGTCTTTGCCTGTAATTCCAACAATTCCACACATTTTAAGTTTCCATCCTTTTGTCTTTTTCTTTAGATCGGTTGTTATCATTTAAAATTGGTATATTCCATTATTATTCTCAGGAACCCAATCAGCATGTATAATATACCGCTTTTATAAAATGATGTCAACAAAAACATCAAAATTGGTACAGGTATAGACCAATGATTGTGATGAAACATATGTCCCCTTTTGTTGCTGCATTATTTCCTTAAATATGCTTATGATAAGTGTTATACGCACTAAATCTTTCGATGCAACGTACTTTTGGTAAAATCCAGGGCGTCCGATGGCAATCGACTTCTTGAATTTGGAAAAAATCTCTGCAGCATATTTACCGTTTACGAGCAAATTCCAGGAATCGACGTTTTGCCTCGTAATCGGCGACTGGCATTTACGGGCTAATTTTCAAAAAACGGCATTTTGCCCGTAATCACTCTTTGTTGCTCGGAGGGGTCGAA # Right flank : CGGCCCGCGCTGCCCTGAGAGTAGAACAAAATCATCCAAAATTGAGAAAATGTTCTACTCAGTTACCTTTGCCAAAGCAGTGTGGTCTCAGATTACGGGCAAATCTCAGAAATCAACGTTTTGCCCGTAATCGAAGTCGGGTGCAGTGATT # Questionable array : NO Score: 2.55 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AAAATGTTCTACCGCTGCCTCCAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.26%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //