Array 1 2894342-2892363 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012033.1 Levilactobacillus koreensis strain 26-25 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2894341 29 100.0 32 ............................. AGTGGTTTTAAAATCATGTTCATTCTGCGCAA 2894280 29 100.0 32 ............................. TAGAGAGTTGCAAAAGAACGGATGGGTGAAGA 2894219 29 100.0 32 ............................. CAGATAGCCATGGTTAACGATGCTACTAGTGG 2894158 29 96.6 32 ............................C AAGATAGGCGGGATCGTCCCAGTTGAACCACA 2894097 29 96.6 32 ............................C TGATTAGTCGAACGGCAATGGAATGTCTTCAG 2894036 29 96.6 32 ............................C GAGAACGACTGCCATGAGTGTCAGCTGTCCTA 2893975 29 100.0 32 ............................. GACGATGGATACAGGGCTCTACTCGGTCGGTG 2893914 29 96.6 32 ............................C GAGGCATTCTTCTTGTTGAGCCGTTTCAGCGA 2893853 29 96.6 32 ............................C GTCGGTAGGGTACCCATGAAAGACGGACGGTT 2893792 29 100.0 32 ............................. CATGTGGCGCCTCCTTGTGTTCATAGCTCTTT 2893731 29 96.6 32 ............................C ACGGATATCATGGCAAAGGCTGGGTACGCCGG 2893670 29 100.0 32 ............................. ACTACTCAGACGATCCGCGGATAGAGGTCACG 2893609 29 96.6 32 ............................C AGATGGTCTTGCAGATACTTATCGTCAATGCC 2893548 29 100.0 32 ............................. CTTTAGCTATTATTCCATCGTAAACGGCGTCA 2893487 29 93.1 32 C...........................C TTGCCTGACATGTTTTCCAGAAAAGTTTGACG 2893426 29 96.6 32 ............................C AGATTCTGGAACAATAACTTCGGTGAGTGTAG 2893365 29 100.0 32 ............................. TCCCGTCTGCTTAACTGGCTGTAAGTCGGTCA 2893304 29 100.0 32 ............................. CTCTATCCGTCTTGTGGTCGATAGCAGACCCG 2893243 29 100.0 32 ............................. CCTCCTTTTCAGTAGTGAAATCAATCCAGAAC 2893182 29 100.0 32 ............................. TAACTGACTAGGAGGCTACATCATGACAAACT 2893121 29 100.0 32 ............................. TTCTTGGCTTCGCATACCGGTCAGCAATGCAG 2893060 29 100.0 32 ............................. TACTGCGAGCTCTGGAACCACGGTATCAGCGA 2892999 29 100.0 32 ............................. CAAAATCGCATTAGAACTCTTCAGGTGAGAGA 2892938 29 100.0 32 ............................. TTGGAACCTCAAGCGGCACATATGGAACGCGA 2892877 29 96.6 32 ............................C AAGCACTGCGTTACTGATGGTGTCAAACTGCA 2892816 29 100.0 30 ............................. TGGCGTTCTTACTCCACCGTTCACCTTGAA 2892757 29 96.6 32 ............................C CCTTGTGTCGTACCATCTAGTCCATTGGATAC 2892696 29 96.6 32 ............................C GACCGAGATTTTAAAGTTGGTGATCGCTTATG 2892635 29 100.0 32 ............................. TATGAAGTTTGAAAAAGCACTGGGATTACTCA 2892574 29 100.0 32 ............................. CAAATTCGGGTGATTGACCAAGTGGCACTTAC 2892513 29 96.6 32 ............................C ATGGGTCGTGTCGTTTGTGTTCTGCTTAACAT 2892452 29 96.6 32 ............................C TGTCGGGTCAATGTCGAATCCCTTAGCAGCCA 2892391 29 96.6 0 ............................C | ========== ====== ====== ====== ============================= ================================ ================== 33 29 98.3 32 GTATTCCCCGTGTATACGGGGGTGATCCT # Left flank : GCCAAGGATGTGATCCTCTCGATTGGTGCGGTCAAGTGGGACCAAGATGGCAAGATTGTACAGTTTGATCAACTGATTCAAGGCGCACAGAAGATTCCGGAAAAAATAACGGAGCTTACTGATATCACCGTTGAAATGTTGGATAAGCAAGGTGTCAGTCTAGCCGTTGGGTTACAGGCCTTGCAAGAATTTATCGCGGATGCCCCCGTGGTTGGCTACAATTTGCACTTCGACGAAAGCTTTTTACTGGCTGCCTTTAGAAAAATTGGGCAATCCAGCTTGACGAATCGGTTAATTGATTTGATGCCTTTGGTAAAGAAGGCGAATAAGTTTCTGGACAACTACAGGCTGGAAACAGTTTTGGCAGATTATGAGATTGAAAACTTGCATCCGCATAACGCATTATCTGATGCGCAGGCAACGTTCGAGTTGGCGAGCAAGTTAAAGGAAAAAGGGCTTTTTTGAAAAATAGAATCCCGGTGTGACGGCGTTTGTTTAGT # Right flank : ATTGTGAGGTGATGCGTATGCGTCTCATGGAAAAGGATTGGATTACTTGACTGCATTTATAGGTGTGTGGAATTAGTGTCAGCAGTGTTAGAGTTGGCGAGTCGCTTAGAGTTGAGGTATAGTAAAGCAATGCTCAATAAGAGTGAGGTCGCTGTACACTACGTTAAGGTGATTGCGATACTAAAAAAAGCCACCTCATCTAAGAAGTAGCTCCGACAATACCGCGCCAAACTCGCGAACTTGCGAGGGCCGTCACAACCGGCTCTCGCTTTTATGTATACATTATAGCATGGGGGTTGATAGCGTGCAACGAGTTGAGTTAGCCAGAGAGATACAGGAGTTATTAGGGCGTAAGGAACTTACAGATTATGCCATAGGTAAGGGCGCCGGCGTTGATATTGAGAGCGTTAGGAAGTTACGCAAGGGTAAGAGTTCGGTTGGACGCTTGCAGTTAGATACGGTGCAGAAGCTGCTAGACTATAAGGTGCGATTAGATGAGT # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.86, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGTGTATACGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCATGTATGTGGGGGTGATCCT with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.90,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2907378-2905401 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012033.1 Levilactobacillus koreensis strain 26-25 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================================================================ ================== 2907377 28 100.0 33 ............................ CGAAAGTACATTGATCAGGCTAAGGACGAGTCA 2907316 28 100.0 33 ............................ TTACGTTCCCGGCAATCAACTGTTCCGCTGAAA 2907255 28 100.0 33 ............................ CATATTCGTACAGATCGTTGTTCAACATCTCTG 2907194 28 100.0 33 ............................ CGCACCATACTCTCAATGATCGACACACGCTCT 2907133 28 100.0 33 ............................ CAGCCAACGTGAGCCTTTTCCTGTAGCCTCATG 2907072 28 100.0 33 ............................ TATGGGAAGTCTCTTCCCAGAAGTAGATGCTGG 2907011 28 100.0 33 ............................ CTATCAGGCATAACCGTGCTCGTGGTACACACG 2906950 28 100.0 33 ............................ CTTTTCAGTCTTGTAATTCGTCTTACCGGCTAT 2906889 28 100.0 33 ............................ TTTGGCCCCGTTAAAGGTCATTCGCTTAGTTTG 2906828 28 100.0 33 ............................ CTTAATTTTCATAGTGTTTTCCTCCTATACTGA 2906767 28 100.0 33 ............................ TTACTCCAGCGGGTTCAAATCTTAGAGAGTGAG 2906706 28 100.0 33 ............................ CGTACAAGATGTTTTCGACAAAGCTAACGCAAA 2906645 28 100.0 33 ............................ CTTTTGTTCCTTTTTTGAAAAGTTTCCTATGGG 2906584 28 100.0 33 ............................ TCGTTCTATACCATTGAGAGTTAAGGACGAACT 2906523 28 100.0 33 ............................ TCAGCATACGGTGGACAGGTAAACACCATGTCA 2906462 28 100.0 33 ............................ CAGTGATGAGACGAAGTTTAAACGCGATGTTCA 2906401 28 100.0 33 ............................ CAAACAGATCGGCTCGTTACGTGACCAGTTCAA 2906340 28 100.0 33 ............................ TGCAGCCAACGTTAGCAATGCTGCTTGAATCGC 2906279 28 100.0 33 ............................ TAGGACCGTTTGGGAACCTCTACTGACTTAGCG 2906218 28 100.0 33 ............................ CGAGTGGCAGGCAAGCTTTTATACCCGGCAAGC 2906157 28 100.0 33 ............................ CGATTGAAATGGGGATCGAGGGGGATGGCAATG 2906096 28 100.0 33 ............................ CAGTGCCGTCTGGCTTGTAGACAACAAGCGCTC 2906035 28 100.0 33 ............................ TAGAACATTTACTGTTCTCCTTTCGACAACTTC 2905974 28 100.0 33 ............................ CATTATTGATTCAATTTACAACGGCAATCAGGG 2905913 28 100.0 33 ............................ CGACTATTTACCAGCAATGGCTCAGTATTGGTA 2905852 28 100.0 33 ............................ TATCGGCAAGTAATCCTGGATTGGGAGCAACAA 2905791 28 100.0 33 ............................ TCTTGGTACCGCCCTTAGATAGGGTGCAGCGGA 2905730 28 100.0 33 ............................ CTGGGTCCCATGCACGAAACTTAATATCTCTCA 2905669 28 100.0 33 ............................ TAAAAATTGGAAATTGATGATCAATTACGGAGC 2905608 28 100.0 33 ............................ TGAACCTCTCCAAACCGGTCGAACTCGTAGTCC 2905547 27 89.3 92 ......................A.-..T TCCTAAAAAGAAACATATGATATAATCATGTATATTCCCTACAGGTGTAGGGGTGATCCGGGTGAAGGTGTACTTCATATTACGGAGCGAAG 2905428 28 67.9 0 A.......TAC.G..GT.........TT | ========== ====== ====== ====== ============================ ============================================================================================ ================== 32 28 98.7 35 GTGTTCCCCGTGTATACGGGGGTGATCC # Left flank : AGGCAATACGTCTTACAAATATTGTTATATCAAGGGATTAGCAACTACTGGTTCTTGTTGGAATATATGAAAATCAACTCAAAGTTTGAGTGCTGGTTAAAAAAGCTTTGACAAACGCATAAATGTCGTGTATAGTTATCTATTAGAGTTTAAGAGATGCTAATAACGTGATTCAGAGAGATTGGTTAGCAAGCCGGAGTTTCTTAGATTTTAAAATGGTCCGCCTGTTCAGAGGAGCAGGGGGCCATTTTTTTATGTAGTTTTTTGAAGCGATACTCTTGAGTTCTGAGTAATAATGTTGATCTAATTGATATCGATCGTAATGAGAATGGATGATAAACTAAAACGTTTTGAGCCCATTGTTACGGAATTTTTTTGTTATTGTTTTGACGATAGAGTAATTGTTAATCGTACATTGCTGAGGTATGCTAGAGAAGCAAGTTAAAGGAAAAAGGCACTTTTGGAAAAATAGGATGCTGGTGTGACGGCGTTTGTTTAGT # Right flank : TTGACTTGATAACACGACCTTCTAATTCATATATAGCGAGTCCGTTTTAATAATGTTGAAGAAATAGTTTAGAACAGAAACAAAATATATTGGCGAATTTTATAATCAAGTTAGCCACTTAGAATTTAGACCAAAATAAATACACCAAGACGTAGATTTCAGGTATCATTGGAGTTCCTACACAAACAATGAAAGAGGTCTTCGTCTTGATGCAAGAACAGCTTACCATGAATCGTCCCAAGGGTCACCACCTAACTTTGAAAGAGCGTGGAAATATTGAGGTTTACTTCAATCACGACAGGTACTCTCGTCGTAAGATTGCTGAGCTGATTGGAGTTAGTGCGCAGACCATAAACAACGAGATCAAGCGGGGCTTAGTGACCAATAAACAGCTGGTTAATGGTAAGGAGAAGTTCTATGAAATCTATGTGGCAGAGCTCGCTGAACGGCGGTATCACGAGAAGCGTAAGGCCTGTCATCGTCCTTGTAAGTTCTACCAG # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.14, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTGTATACGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTAGGCGGGGGTGATCC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.90,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //