Array 1 3060375-3059745 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP023710.1 Vibrio parahaemolyticus strain HA2 chromosome 1, complete sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
   3060374	    28	  96.4	    32	........T...................	AATTGAAAACAAAAGATCGCAAGCTTTTTAAC 	
   3060314	    28	 100.0	    32	............................	ATAGATCTGCACTTTCATCGCATCGACTTCCG 	
   3060254	    28	 100.0	    32	............................	TAACACGGTCAATATTGACCCGTACTGCTGTT 	
   3060194	    28	 100.0	    32	............................	AAGAACCTTATCCGAATAGTTGGAAATCGTGA 	
   3060134	    28	 100.0	    32	............................	TTTATCATGGTTAAGCCCTCTCGATTTTAAGC 	
   3060074	    28	 100.0	    32	............................	TCATGGTTATTTGTTTAACATAGCCAGTGACG 	
   3060014	    28	 100.0	    33	............................	GCAGCACAACCCCGCAAGCGTAAGCGCGTAATT	
   3059953	    28	 100.0	    33	............................	TTGAGCGATTTTAGTGTGAAGTTCCTTAGCTAA	
   3059892	    28	 100.0	    32	............................	AACAACGCAAAGGGTAACGTCTTTACCTTTGA 	
   3059832	    28	 100.0	    32	............................	GTTTGACTTTGCAGAGCGTAGCCCGTTCTTAA 	
   3059772	    28	  92.9	     0	......................C.A...	|                                	
==========	======	======	======	============================	=================================	==================
        11	    28	  99.0	    32	GTTCACTGCCGCACAGGCAGCTTAGAAA	                                 	       

# Left flank :   GCAAGTTAATCGAGGTTTTCGCTCTCGCTTTAAGTTTGCAGCTTTGGGTTTTTCGGGCTCAAAACCCATTTTGTTGCTGAAGGTCTGCATTTCGTGGTTGTTGGAACTTTGGCTGAAACATAGTGATATTTTTGGTTCTTGAATCACAAAAAGTCAATGGGTGTTTGGTTGCTTATTTTGTTTCGGGTAATCTGCTTTCAAAGCAACTTAAACATTGGTGGGAAACTTCGCCTAACAAGGCGTTTAAGGCGGATTCACAACGCTTGGCGATTTCAGTTCAAGTTGAATTTAGTGTTTAAGGTACAATGGCTTAGGTTTGGTGGTTTGCGTTGTTCACCACTTAACGCGGCGTTAACTGGCAATTAAATTACCCATCTTTTTTGTTGAATCTTAACTTATTGATTTTTATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTATTATTAACAATAGGTTACTGCTAAAGTTCCATA
# Right flank :  TATTGGTAACTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTCAAGAGGGACTTGGCACGCGTGGCATTTTCGGTTTGCAGTTTGTTTAGTGGTTAAGTGATATGCAGCAACTTTTGTATTGCGTGCCTGCGCCCCTTAACGCGGCGTTAGCCCTCAAAGGTCAAATATGGATATTTACCCAGAAATAGAGTTATCTAAAGAGCAGCATAACTCAATTGAAGTCCTCAGAAACAAGTCGTTTCCTGAACATCAAGTAACTCGTTCTTACTATAAACAACTCCCGCATATGAGAGCTTTAAAGTACAGAGATGATCAACTGGTTGGTTACATGGGACTGGACTACAGAGTTGTCAGCGTCGGCGATGAAATTTATAAAGTATTGGGCGTTAGTGACTTCTGTGTTGAACAATCATCTCAAAGAAATGGTATTGGCACCGCCATGTTGTCTCAACTCAGCGAGTATGCTTCAAGCAAAGACGTCGACTTTATTATTCTA

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGCACAGGCAGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [2-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [53.3-76.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.92   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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