Array 1 1789-2219 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJVJ010000022.1 Anoxybacillus flavithermus strain WS5495 22_37768_79.6631, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1789 36 100.0 30 .................................... AGGTGAGATGTAGATGCGGAAGTTGACGGA 1855 36 100.0 30 .................................... TCGAACTGGTTTTTGAGAACGGGAAAGTGA 1921 36 100.0 30 .................................... TTGACGCTTGCTGGAGGAACAACAGGGACG 1987 36 100.0 30 .................................... GTGAGGGAGGTAGATGAGTAACTTAAATGA 2053 36 100.0 29 .................................... CTCGCTCTTTGGGAAAATTTCATTCGCTT 2118 36 100.0 30 .................................... AGATTACGTTTACACGGGACTGGTCGATGT 2184 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 100.0 30 GTCATAGTTCCCCTGAGGTTATTGCTGTGGTATGAT # Left flank : TCTTACGTTTGGGACGATTGATGAAGCGATTCAAATGATCAACGATTACGAAAAGCCGCTTGCGCTTTATTTGTTTTCAGAAGATCGCGATGTGCAACAACAAGTATTACAACAAGTTCGTTTCGGCGGTGGTTGTATAAACGATACGGTTGTACACGTTGCCAATCCTCATTTGCCCTTCGGTGGTGTTGGACAAAGCGGCATCGGTACATACCATGGAAAAGCAAGCTTTGATGCATTTACTCATTACAAAAGCGTGCTCAAACAGACGACGAAATTTGATATCCCGTTGCGTTACCCAAACTTTCCACATGCGCTCAAATGGGTGCGGAAGTTATTGAGATGAAAAAAGGCTGATCCAAAGTACGGATTTGTATTATCCCCTACAGGTAGCCAACAAAAAAGTGGACATTTGTTATGGTGTTCTTAAGAGTCTACCTGGAAGGGGTTTTTATGACCAAATGTAAATTATCAATTTATCCTTGAATAAGACACCTAAG # Right flank : TACGTGCATCAAAAAGCCTGTAATATGAACGATTACAGGCTTTTTGATCGTTTTAAAAAAACGTGAGAAGGGGAGAAGAGTTATCCTTCATCCGTTTTTTTAAAAAAGTGACAGTTGCGTTGTTGTAATTGTTTTTTCCTTGGTAGTAGGTTCTCCTAAGAGAAATTGCATTTTTGCATATTGTTTTTCCGTTACGATCATCGCCCGCACTGATCCTTTCGGTGGCAAGTTTCTTTTCAGCCTATTAAGATGTTTATCAGCAGATTCATGCCCATTGCAAATCCGACTATATACGGAAAACTGTAACATATCATATCCTTCGTTCAATAAAAATGTACGAAATTGTCTGTAGTGCCGTTTCTCCCGATTAGTGACGACAGGTAAGTCAAAAAACACAAGTAATCTCATAAACTTACTCATAGGTGTGTATTTGAATAGGAAGAAGTTCCGGCAATTTTAAAAACGAAGGTTTTTCGTTTCGACTAGCTGTTACGAAGCTC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATAGTTCCCCTGAGGTTATTGCTGTGGTATGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 25334-25704 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJVJ010000006.1 Anoxybacillus flavithermus strain WS5495 6_99312_95.3021, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 25334 30 100.0 38 .............................. AGGGACGAGCTGCAATGACTGTCACTTCTCCGTCCTGG 25402 30 100.0 39 .............................. TCAGACTCCAGCCGATCAACCGATCCAACAGGTTGAACA 25471 30 100.0 34 .............................. CGTCAACAATTTTTTTCTCCGTGATCGCTACAAA 25535 30 96.7 40 ...........G.................. ACAATACGAGCAGCACGATATTTACCAGATTTCACAAGAG 25605 30 96.7 40 G............................. CTCGATAAGTTGCCTGATGTTTGGAGGCGTCTACCAATTT 25675 30 96.7 0 G............................. | ========== ====== ====== ====== ============================== ======================================== ================== 6 30 98.4 38 ATTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : TATTGTTTGGCTTTTTTGAAACATATGTGAAATTATCAGACGAAGAAGAACGAAGACTGCGAAGCGAGGTGAATGAAATGGAGACGAAAGAAAAAGAACAAGTGATGGAGTTGATTATTTCGTATGAACAAAAGGCGTTGGAAAAGGGAAGAGAAGAAGGGATAGAACAAGGAATCAAACAAGGAATCAAACAAGGGATGAAGCACCTTGTACAAACGATGGCCAAAAAAGGGATGAGTGTAGAAGATATCGCAAACATCACAGACCTTGCGGAAGATGAAGTGCGTGAGTTGTTAGAAAAGGAATAAGTAATTTGCGCATAATTTCACAACCGTCGTCGACCTCCAATCTTGCAAAAACCCCAGGGGATCGACGACAATTTGTTTTTTGCAACTTTTTTAGACGTATCAACGCATCAAGACGATTGACAGAATTTTCGAATGTATGTATAATGACATTGTATAGCTTTTCCAAGTATTGATTTATCAGCACTTTTTGGG # Right flank : CACCTTTGTAAAAATTCTTCAATTACTTGAGCTTTTTCGTTTGGTTTGTATCGTACCTACAAGAACCAGTATGTTAGGGTCTGGATTTTTTTGTATATACCATTTTACTTTTTCTTTAACATTTGCTATAATATAAGGTAGAGAACATCTTTCTTTCCGATTATGGTAAAGTGAGATGTTTTTTTCGTGGAAATATTGATTTCACAAAGAAATGGAGGGATTTCTGATGAAGAAATACGCCATTGTGTATTGTGAACATCAATTTGGTTCCATGGATGGAAAAACAGCGAATGGGCTTGTGCGCGATTCAGGGCTGTATGAGATCGTTGCAGTCATTGATTCGACAAAAGCTGGTCAAGATGCCGGAGAGGTGCTTGATCAAAAGAAAAATGGCATTCCGATTTGTAAAAACCTTCAAGATGCAATAGCCTCCGCAAAAGAAAAACCGAACTACTTCATCTTAGGAATTGCTCCAGCGAACGCTTTTCTCAAAAAAGAAG # Questionable array : NO Score: 9.18 # Score Detail : 1:0, 2:3, 3:3, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 11571-11403 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJVJ010000032.1 Anoxybacillus flavithermus strain WS5495 32_24117_141.091, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 11570 30 96.7 40 A............................. CGGGGAACAGACGGAGCGGTGACGTTTCCGCTTCATTATC 11500 30 100.0 38 .............................. AAGCTCGTCACAACTCGGTCATTTCTCCGAATATCGAC 11432 30 83.3 0 .................A....T.AA...A | ========== ====== ====== ====== ============================== ======================================== ================== 3 30 93.3 40 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : AGAAGCGATCGATGCAACAAAGCGCCCGCTCGTAATCGGAGGTGTATTCGTACTTATGCTTGCATCGATCATTTTCTCTCACCGCGCCAACACATATTTGCGCAAATTAGACAATGAACAGTAAATTCCCCTGTTTTCGTACAAAGAAAAAACATGTAAAATAAAAGAAAATGGGTAAAGGGGGAATAAACGATGATGTGGATGATTACAGGTCTAGTCATTACAGCTGTCATCGGTTTTGTTATTATCGCGGAAGTGAACGCCGAAGCATAAAACAGTCTCTAAACAGGAGACTGTTTTTAATAAAATTTATTTGTGATAAACTTCACAACTGTCGTCGACCTCCAATCATGCAAAAACCCCGGGGGATCGACGACAGCTTGTATTTTGTCACTCTTTCAGTTGTATCAACGGATATAGACTATTGACTGAATTTTCAGATGTATGTATAATGATATTGTATAGCTTTTCCATGTGTTGATTTATCAACATTTTTTTGG # Right flank : GCTGTTCCGAGCAACACTTCGGAACAGCTTTTTTGTTGTTATGATTTCCAAAGACCTTTCTTTTGTAAACGTGCTTTTCGTTCGGCTATACATCAGTGTATGAACATTTGTTATAATGTATTTACACGATTATTTCCTTTATTGACAATGATAGATAGATAATCCTTTTTCACTTTTATTTTTTTAGATATTTAAAAACGTGATAGTGAATTTTGTCGAATTTATTCACACAAACGTTATATAATAGTAGTAAAATAAAGGAAAGATAGAAGCTGCAGGAGGTAACACCATGGATTCCATTCAATTTCAAGATAAAGTGTCGTTTATATGGGCGAATGCAGATTTGTTGCGCGGAGATTATAAGCAATCGGAATATGGAAAAGTGATTCTACCGTTAACGGTGATTCGGCGTATTGATGCGGTGCTAGAACCGACGAAGGAAGCGGTTCTTTCGCAATTGGAAGAATTAAAAGCGATGGGAATGACGATTGAAGACGGGG # Questionable array : NO Score: 6.83 # Score Detail : 1:0, 2:3, 3:3, 4:0.66, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.52%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.77 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //