Array 1 161554-162185 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAAAMF010000006.1 Pseudomonas chengduensis strain MBR scaffold6, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	============================	====================================	==================
    161554	    28	  92.9	    32	....T.......G...............	GGCGATAGGTTTTCAATTGGGCTTAACGCATC    	
    161614	    27	  78.6	    33	.A..A.......C.T........-..G.	GGAGCGGGAGCGCGACCAAGACAAGCCACAGCA   	
    161674	    28	  92.9	    32	............G.......G.......	TTCGCTGCTCTCGATCCGGGGACGCTTCACAC    	
    161734	    28	  92.9	    32	............G...........T...	CAGTACCCCGACGTGCAGATCGTGATTAGCAG    	
    161794	    27	  82.1	    33	..G........AG....T.....-....	GCGGAATGTCGGCGAGTCCTCCGGCGGCGACTC   	
    161854	    28	  92.9	    32	............G..............T	AGGTCGCGACGTGGCACTCGGCCACTCATCAC    	
    161914	    28	  96.4	    32	.......................T....	AGGTTGCTCCAGTCACCCTGCTCTCGCGCGTC    	
    161974	    28	  92.9	    32	........G..T................	AAACGAGGCGGGCACCCCAACGAACACCTGGT    	
    162034	    28	  85.7	    32	....A.T....AG...............	TGGCGCATGGATTCCATTACATCCCGCTCAAC    	
    162094	    28	 100.0	    36	............................	AGCACGTGATTTGCGTTCTGCATCATTCCCCCCACC	
    162158	    28	  67.9	     0	...AT.......G....T.....CATTT	|                                   	
==========	======	======	======	============================	====================================	==================
        11	    28	  88.7	    33	GTTTGCCGCCGCATAGGCGGCTTAGAAG	                                    	       

# Left flank :   AATGACTTGTCTGAAGAGCACTTCGCACCCCAGTCCAAAGGTAAGGCTAAACGTTACCTGGCCATTGATGTGAAGCGAGGACCATATAAAGCAAATATGAGCAACTATGCGGGAATTGATGCGCGAACTGTGATCTTTTACGGTGTCGGTGATGCTGATCGAGTTGTTGAGTTGATACGTAACCACCTCCCTGGAATTGGACGTAGAGCCAATGCAGGAGCAGGTGAAATAGTCGATGTGAATTGGAAGCGCATGACAGAAGACTACTCGTGGATCACCCCAAGTGGCTTGCCAGCCAGGCCACTTCCATTGGCAGTGTGGAATAAAATCAGTGCTTTTCGGCCGGTGCCTGTTGCCGACCTGACGGTTAATGTCCCCTACTGGAATGGTGACCTGGTGTCTGCTGCCTATCCATTAGAACTGTCGGCGTAAAGTCGTGTTCCGCATGTCTACCACCGTGCGGGTGGTTTAGAGGAGCGCGCGAGAACATACAGGTCAGA
# Right flank :  TTATCGCAGGGCATGCGATGCCCAGGAGTTTAGCCAGCATGATCCCTAATTTTATCAAGCGCCTCTTTCAGCGGCACCCGGCTGGAATTGTCGTCATTGGCACTGGCGGCCCTGGTCATCAGCTCGAAGAGGTCTGCCGTGACGGTGAGCTGGTCAAGGTCACCGGCAATTACGTCATTCCCAAGCTGGACTGGGAGGAGGCAGCTAAGGCCCTAGACACGCGGGCCGAGCCTGCTCGCGGCACCCGCTAAACGTCTGCTGTATACACAGAGCCCGGATGGCGACCCCATCCGGGCTTTTGCTTATTGTGCGCACAGCTTGCAGGGTAATTTAAACTTGATAAAGAAACTCTAAATGAAGTATTATTACCCTGTATTTTGGCTAACCGGGGATCGCTAGCGTGCGAGTTCAAGACTACCGCGACATGACGGCTCAGATGTTTCGACTGGTGGATGACTGGTCAGCATGCGTTGATGAAGCGGAGCGCAGCGCCTGGCGAG

# Questionable array : NO	 Score: 3.40
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.44, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.20,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTGCCGCCGCATAGGCGGCTTAGAAG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTTTGCTGCCGGATAGGCAGCTTAGAAA with 89% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-9.70,-9.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [12-16] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [41.7-50.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0.37   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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