Array 1 755503-756971 **** Predicted by CRISPRDetect 2.4 *** >NC_017469.1 Lactobacillus delbrueckii subsp. bulgaricus 2038, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================================================================================================================================== ================== 755503 36 100.0 30 .................................... ATCATGAATGTAATGTCTAAATTGTCGTTA 755569 36 100.0 30 .................................... AGAGCTTGCAGTTTACGCCGCTGAGTGATA 755635 36 100.0 30 .................................... TGCCTCTGTCTTGCTTAATCAATCGTGCCA 755701 36 100.0 30 .................................... CTGCACTTCCTTTCCAAAATAAGTTTTTGA 755767 36 100.0 30 .................................... ATAAGGATCCTGATTAACGTTGGATACCTT 755833 36 100.0 30 .................................... AGTGTTTTTGAATGGGGAAGCAGTTCACAA 755899 36 100.0 30 .................................... GCCGGGGCAATAGCCCCCGCCAGAGCGTCG 755965 36 100.0 30 .................................... ATCTGATTTTCAGTCTTGCAAGTAACTAAA 756031 36 100.0 30 .................................... AACTCTTTGTTTAATTATTTTTTCCTCCAA 756097 36 100.0 30 .................................... ATCTCCGCGGATATCCTCGAAACTCTCATC 756163 36 100.0 30 .................................... CGAATACGAAAAGACATTGTACGGCTATTC 756229 36 100.0 30 .................................... CTTCCCTGGTGCTGGTGTCGATTGCTCCCA 756295 36 100.0 30 .................................... TGCACTTCAGCAGCAGAGCCTGGACAACTG 756361 36 100.0 30 .................................... ACTAAGCCCGCCGCCGTGGTATCACCTACA 756427 36 100.0 30 .................................... TTTTAACGACTTGCCCAGGTCGATTCCCGG 756493 36 100.0 30 .................................... TATTTTGACGGTAGAAGCACGCAAACATTA 756559 36 100.0 30 .................................... TACGCAATCTACACAAGACACGCCAAGGGA 756625 36 100.0 30 .................................... AGGCTGGTAGTGTCAAGGATCAAGCCTAAG 756691 36 97.2 30 .................................T.. GATCTTGTCAGAGTGGTTGAGCATGTCGTC 756757 36 97.2 143 ...................................G CTGCTTGGATGCGTGGATTGAAATAGTTTTATAGGGGTGCTTATTCAATGTTGTCAATTTTCCCGACGTATGTTGGGGTGGCCATCATAATGGCCTAATACTAAGACGACAATTCTGCTCATTCCACGTAGGTGGGGGTGATC 756936 36 75.0 0 ..........A..........C...G..GAC..AAG | ========== ====== ====== ====== ==================================== =============================================================================================================================================== ================== 21 36 98.5 36 GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC # Left flank : CAGTGAATCTTTACTTCAAAAGTACATGACCAAATTAACTAGTTATGTAGTTGATGAGCTAAGCGCAGATGGCAGAAACAGAATCATTACCTTCTATCGCGATTTACTAAATGCTGTTCAAGACGAGTTGCTTATGGAAGATTTGCCGCTTGAAATAAGTTTTGACACAGACTTGAAGAAACTCTTCAAATTTGGTGGTCTACACTTTAACAAGACACTCACTCACGATCCATATGGTATAATCGAGACAGTACTTAGGATACATGACAGGTTAGATCTTAAGTCTACTGTTGTTTTTAGTAATGTAGCTCATTACTTAGATGTAGAACAGTTTAACGAAATATCTAAGCTGTGCTTAGAGCTAAAAAAGTCTATTATTTTTATCGAGTTTTGTAGCCATAAGGATCAGGTTGTATATGGTGATGCAAAATTCAGTTATATCGATGAAGACCTTGTTGATTGGTACTAGCCTTAAATTAAAGCTGTGTTAAAAAATAACG # Right flank : GTGCTTTTCATGATTGAGAAGCACTTTTTTCTGTTGAACACAACAACTTAAAAAAACGTTAAATCAAACGCTTCACCAAGCAAGCAGGAAAAGATTATAGTAAAATACACTGGTTATAAAAAAGCTGAGCCAAGCTCAGCATCCCCAAAACAAAACTTAGTTAAGGAGAATAAACACATGCAAGATATTTATATTGTCGCGGCCAAGCGAACTCCATTTGGCCGTTACCACAAGCAATTGGCTGACTTTTCTGCTATCGACCTGGGCCAAATCGCCCTGCGCGGCGCATTAAAAGAAGCCGGCCTTGACGCCGAAGCCCTGGATGCCCTCTTCATGGGCAATGTCCTGGCTGCCGGCTTAGGCCAAAACATGGCCCGGCAAATTGCTTTAAACGCCGGGATGCGGCAGGACTCAGTCGCCGTGTCCATCAACGAAGTCTGTGGCTCCAGCCTCAAGGCTGCCCGGCTGGCTGAAGCCCAAATGTTAATCGGTGACCTGGG # Questionable array : NO Score: 5.69 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.49, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //