Array 1 167576-168138 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JGZA01000001.1 Bifidobacterium longum subsp. suis strain LMG 21814 Contig01, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	=================================	===================================	==================
    167576	    33	  97.0	    33	................................G	TGGCTCAAAAACGCATGGTCTTCAATCGGTTCG  	
    167642	    33	  97.0	    34	................................A	GGTGGAGATCACCGGAGACCGGTTCGCCCAGTCG 	
    167709	    33	 100.0	    32	.................................	ACGTCCAGCTCATGCTCCTCGTCAAATGGGCC   	
    167774	    33	 100.0	    34	.................................	ATCAAGCATTAGGTATCAAAAATCTGCCGCTGAA 	
    167841	    33	 100.0	    32	.................................	CGACCATGACGGGGGCGGGGAGGGGACGCTGG   	
    167906	    33	 100.0	    35	.................................	TCCGACACCGCGCACTACTACCTGATCGTCGAATA	
    167974	    33	  97.0	    32	................................C	ATCGTCAAGAACAAGAACCGCTTCGTGACCAT   	
    168039	    33	  97.0	    34	................................A	ATTTGACTGGTGCCGAATCCACTCAGGTGGCCGA 	
    168106	    33	  97.0	     0	................................C	|                                  	
==========	======	======	======	=================================	===================================	==================
         9	    33	  98.3	    33	GTCGCACCCCACTGGGGTGCGTGGATTGAAATT	                                   	       

# Left flank :   TGCCGATCTGGACATCGCGGACCGTATCTCGCTGGTGCTGACCGTGCCGGCTGTCGATGTGGCCAAGGTCGAGCAGTTCCGAGACCTGATTGCCCACGAGACGCTGGCCACCTCCTTCGAGGTGAAGGAAGGCGCCGAGCTGGGCGTGGAGGTTGTTAAGGCGTGAAGCTGATGGGCGGCTGAGCTAAGGTTCTGATTCCGCCTGCTCGCTGAGGGTGGTCTTGCTGCTGATTGAGCAGCGGGGCCACTCTTTTTTGGGGTATGTAAAATCTCTGGTTGAAACGGAAACATGAATCGAACGGTTTTCAACCAACCAACCTCTTCGGAGTCCGGAAAGATAATCGTCTTTCAAAGACCGCTATTCAACCAGAGATTTAACATACCCCTTTTTTGTATGGCTGCATGTGTTGATGAACGACATTGAATAGGGGATCTGCATTTTCATATGCGTTTACGATTCTTGCGGAGTCTGCCGCAACGGACGTGACGCCCAGCGCCTA
# Right flank :  CGGCATGGAATTGTCCCCGCTATAGACGTTGCCACTCATGGTGGCAGACGCGGAGAGATAACCGCGCGACGGCTAAACCGGACGTCTGGAATTGTATAATTGGGCTCACTGTAGCGAGTATGCGAGGTGAGCCATGAGTCTTAGGGAGTTAAGGCAGAAACGCGGGTTAACCCAGCGTCAACTAGCTGACAAGTCAGGCGTGCCGCATACACGAATCGCCACGACTGAAACCGGGTCAAGACCTATCGAGAACATGAGTCTTGGCATGGCTATCAAGCTGTGTGACGCGCTCAGGGTATCTAATCCGCGCAAGCTGTTAGAGGCTGATAAGCCGAAAGAAAGCGCCGCCAAGTAGGCGGGCGCGTGCCCTAATCAATTCTTCGCCCGACTGTAGGCGTTGTGTGCAGTCGGCCTAAACTCACTGGGTTCACCCCATAGTCTAGGCACTCATGGCGTGTCCCAAGGTGGACGGGATACGCTGAAGTCAATTTTGAAAGTGA

# Questionable array : NO	 Score: 5.98
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.81,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCACCCCACTGGGGTGCGTGGATTGAAATT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [6,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA with 91% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-7.00,-6.80] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [43.3-43.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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