Array 1 36295-37604 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHPC010000009.1 Escherichia coli strain LMLEEc117 NODE_9_length_193974_cov_28.437908, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 36295 29 100.0 32 ............................. GTGACCATAAGGGCATTTCATACTGCCTTGCT 36356 29 100.0 32 ............................. GTGAACGTGACAACGCCCGCGACAGAAACGTC 36417 29 100.0 32 ............................. GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC 36478 29 100.0 32 ............................. AAATTAATTTCGAAACGGGCGTTGATGGTGAA 36539 29 100.0 32 ............................. GCTGGCGCACCTTACGCAAAAATAGACGTAAA 36600 29 100.0 32 ............................. CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG 36661 29 100.0 32 ............................. GGGTTCTATTTCCTCGGGATTTGCCGACACGC 36722 29 100.0 32 ............................. GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG 36783 29 100.0 32 ............................. GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA 36844 29 100.0 32 ............................. AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG 36905 29 100.0 32 ............................. TTGGTATTAACGGGAATGTAGTCACTCCAGGA 36966 29 100.0 32 ............................. GCGATCGTATTTTCCGCTACGTCGCTCAAATG 37027 29 100.0 32 ............................. TCGTTGATGGTGTGATGAGTGTACAAAAAAAA 37088 29 100.0 32 ............................. ACGACTGAATCCGGCGAGGCTATCAACTGGCC 37149 29 100.0 32 ............................. CCGCACACGTCGAGCTGGTGGGGATTAATGCT 37210 29 100.0 32 ............................. CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA 37271 29 96.6 32 ............................C TCTGTGTATTCGCTACCAGCCAGCACCGGTAC 37332 29 100.0 32 ............................. CAGGGTAACTGGCTGCTCCTCAACCATTCCGC 37393 29 96.6 32 ........C.................... GGGTTTTAGCGACCGGACCAGAGTACGCAACA 37454 29 96.6 32 ........C.................... TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT 37515 29 96.6 32 ........C.................... GGAGTGATGAATTGGAAGTAACGGATAACCGC 37576 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 22 29 99.4 32 GTGTTCCCTGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT # Right flank : GGACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.30,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //