Array 1 168557-167795 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR134510.1 Actinobacillus delphinicola strain NCTC12871 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 168556 36 100.0 30 .................................... CAACAATGGCAAACACTCTCCCGCTTGTTA 168490 36 100.0 30 .................................... CCAAAAACAGAAACGGAATATCTATTAGAA 168424 36 100.0 30 .................................... CAAGCGTGTACACAAAAACAATGCCGTGTA 168358 36 100.0 30 .................................... TAATAGAGCTTTATCGTGCCCGTTTATCAG 168292 36 100.0 30 .................................... TTCGGAAAAGGCTTTATCGCAGTTTTGCCT 168226 36 100.0 30 .................................... GTTCGCGTGGTTAATGTTCGTACGATTGAG 168160 36 100.0 30 .................................... CAACAAGGCTAATTGCCTCATCTAAAGTTT 168094 36 100.0 30 .................................... TAAGGTGATAGCCTCACCCTCTTTTTTATT 168028 36 100.0 30 .................................... AAAATCGTACTTAAGCCCTTTCGTTTTATT 167962 36 97.2 30 ............C....................... TATAAGAGTTTTGACGGTGAAAATGCTCAG 167896 36 97.2 30 ............C....................... GGCGATAAAGCAACAGGTCGCAAGCATGAC 167830 36 88.9 0 ............C............A.T.......T | ========== ====== ====== ====== ==================================== ============================== ================== 12 36 98.6 30 ATTGTAACACAGTAAAATGAGAAAGGGAGTTACAAC # Left flank : GATTTACCTGTCACAACTAGAGCAAAACGAAAAGCAGCGAACCGTTTTCGTATTTTTCTTCAAAAGGACGATTATCAAATGATGCAATTTTCTGTATATAGCCGTATTCTGCGAGGCCAGGATAGCCAGGAAAAACATCTAAAACGGATTCAAGAGCGATTACCGAAAGAGGGTTCTGTGCGTGTTTTATTGATTACGGAAAAACAATATACAGGGATGCAACTTTTGGTCGGTGATAAACGGCCAAATGAAAAGAAAATAACTAGCGATCAACTGCTACTTTTTTAATCTGAATAATAAATCAAATGCTGATTTTTTATCCTTTAAAAGGCATCAAATAGTGGTAAAAGTATGATTTATGAAAGGCTAAAATATCTTTAGTAATGACGTTTTTTTACAAAAAAAATCGCAAAATCGGGAAGAAATTTCCAAAATTTTGCGATTTTTTATTTAATAAATTGCCTATAACTCATTGAAAATAATATGTTATTTGCAAGGGT # Right flank : TATAAAGTTAGGGTTATTTTATTAATATACTAGGTCAAAACCAGTTGTAGTAATACACTTCATTACCATTTTCAATTTGTTGTTTTGCAGATTTAAAAAGAAGAGTAGTAAGTTCGCGCTCAGTAAGATTTTGGTCTCCCTCATATACTTTTTCATCTCTACACATCGCACCAGTTATGCATTGATGGATGATGGTATCACAGTCGTTTAATGATACTTTTAAAAAAATACAGTTATTATTTCTCTGGGCTAGATCACTATCTTCACAAGTCTCTATAAGCTCAGACCACTTTTCTTCAAAATATTCGCTAATATCCTCATTTCCCCGCATATAAGCTTCATCTATTTCTCGATCTAGTGCTTCCTTTTGTAGTGTGAGAGGCTGGAGGGCATCATATAATGGACTTTCTATTGATTCATCCTCTTCCTCATAATCATCCTCGTCATCTTCATTTATCGTAAAGCTAAAGCCTGTTAAATTATTATCAGTTGAGAGGTAT # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGTAACACAGTAAAATGAGAAAGGGAGTTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 174914-174614 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR134510.1 Actinobacillus delphinicola strain NCTC12871 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 174913 36 100.0 30 .................................... TTGATAAATCAGATCGTTAAAGAAATAGAA 174847 36 100.0 30 .................................... TCGATTGATTAGATCTTGAATTATGTTGTA 174781 36 100.0 30 .................................... GTTATAGCTCGTGATTTCCGTCACTCCCGC 174715 36 100.0 30 .................................... CGCACGTTGTGCGACCATCTTTTCAAATTC 174649 36 83.3 0 ...........................T..ATTGC. | ========== ====== ====== ====== ==================================== ============================== ================== 5 36 96.7 30 ATTGTAACACAGCAAAATGAGAAAGGGAGTTACAAC # Left flank : ATTAGTGCGTGTAACAAACCTAGCACGCACCCTTCGTGAATTACAGCAACGCCACAACATTTGGGTAGTAGGAACCGCAGGCGAAGCGACCAGCACACTTTATGAAACTAAATTAACAGGCGCAACCGCACTTGTTATGGGGGCAGAAGGTGATGGTATGCGTCGCCTAACCCGAGAAACTTGCGATGAATTAATCAGTATCCCAATGGCAGGAAGTGTTTCCTCGTTAAACGTTTCCGTAGCAACTGGTGTATGCTTATTTGAAATCGTCCGCCAACGTATGGCTTAATAAAGTATTTCTGTACCTCATATAAAAAAGCCCTGTTTTTAAACAGGGCTTTTTATTTAGAAAATCACAATCTAAAAGCAATCACGAACTAAAACGTATAAGTTTTTTGCAAAAAAATCGCAAAATCGGAAAGAAAATCTCCAAATTTTACGATTTTTTATTTAATAGATTACCAATAACACATTGAAAATAATACGTTATTCGCAAGGGT # Right flank : CCTTTACTGCTTCAAAAATAAAAAAGCCACCATAAAAATGGTGGCAAATATCATAAAATTTTCCGAAAAATAGGGCGTAATAACTGATTATTTATCAGTTTTTACGTTTACATCAGTGCGTAGGTTTACGTCTAATGTATTGTATGGAATTTCAATATTATTTTGATCAAGGGTTACTTTGATACGTTCTAATAAATCTGCTTTTACTGCAAAGTAGTCAGCAGTATTCACCCAACCACGTACGAATAATTGTACGCTGCTGCTTGCAAGTGCATTAACACCGATTGATGGTTCTGGTGATTTTAATAAACGTGTTTCTGATTCAAGTACACCTAAAATCACATCGCGTGCTTCTTTGATATTTGCGCTATAAGCGATATCAATAAGTAAATCTACACGACGTTGACCAGTCATAGAGTAGTTAGTGATATTGCCGCTGAACATTGTTGAGTTAGGCACGATCACGATTTTGTTATCAGGGGTTTTAAGTTTAAGCATGA # Questionable array : NO Score: 2.90 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGTAACACAGCAAAATGAGAAAGGGAGTTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //