Array 1 239688-240753 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQWN01000001.1 Desulfurispora thermophila DSM 16022 B064DRAFT_scaffold_0.1_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 239688 37 100.0 37 ..................................... CCTCGAGGAACACACCCTGACTGTAGTGGTATCAGTT 239762 37 100.0 37 ..................................... TGTCCGAGAATCGCCTTGCTGATTTCGCTGTTGCAGA 239836 37 100.0 37 ..................................... CAGCCATGTGACTGACTTCCACACCCGTCTTGTCCGA 239910 37 100.0 36 ..................................... CTCTATAGACAAGGACAGACCGAATGGGATCATTCA 239983 37 100.0 38 ..................................... AGGCGGAAGAATGTGCCCAGATACTCTGGGAGAAAGGA 240058 37 100.0 39 ..................................... ATTGACTATGCCGAGATTGTGTTAGATGAAGATGATCCA 240134 37 100.0 35 ..................................... ATAAATATGGCGATGTTGATCAACCTCACACCTCA 240206 37 100.0 36 ..................................... CCATTGAATATTGCTTGGAAGGAGTACAACTTCAGC 240279 37 100.0 35 ..................................... GCTGCCTCTTCTGGGGTAGCAGCATTCATAAATTC 240351 37 100.0 38 ..................................... ATCGTATAAAGCTATTTTTGCTGCATCAGAAAGACGTA 240426 37 100.0 34 ..................................... CACAGGTCGATGTACCCCTGCAGTTCTGGTGAAA 240497 37 100.0 36 ..................................... AGCTTCCCGCAGGTCGGCCCACTGCAGGTTAACCTC 240570 37 100.0 38 ..................................... TTACCTGCAGGACTACCTGCAAAAGCATCAGAAGCTGG 240645 37 100.0 35 ..................................... ACCGCGAAGCCGTCTTTCCCTTCGGCGGAAAACTG 240717 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 15 37 100.0 37 GTGCCAACGGCCGTTAATCCCTGTAAGGGATTGAAAC # Left flank : GCAGTTCAGTGTCTTTGAATGCCAGAAACTGAGCAAAGAGCAGTTTTTGCGCCTGCGCTACCAGCTGGAAAAGCATATTAAACCGGCGGAGGACAGTGTTAGGTACTATATCCTTTGTGAAGGATGTGCTGGTAAGGTGATTCGAATTGGTGGTGAAGAACTGCGCCGGGAGGATGTGTTTTTGGTATGAATATTTTCCCTGCCTTCGGGTGGGGTTATTTTTTGATTTCCTGAATGAACAGCTATAACCGGATGTTGTAAATATCGGAAAGTATGTTTGTGTAAATATATGGAATATGCGCGGAGAATATGCGCGGATCGAAGCTGTGGCCATTTTCCCGGGGGATCCGCGCGAATCCGCAAATGCTTGTGGCTGTTGACATTGGACTGTTTTGTGTGGTAAAATTTTACCGGTGCTGAGGGCCGGGAATGAAGTTTTTAAAAGGATCCGCGCAAAATGCATTTTCAGCCCTTGCCATTCCTGGCTTGCGCGGGTCGCG # Right flank : CAGCTTCTTTTACCGCTCTTTGCCGAGAGCGGTTTTTTATTTTGGCAAAAAAAATCCCTTCCACATCGTGTAATCTAATAACTGTTCAAATTGTTAACATTCCATTGAAATTGTTGTTGGAGGGTAATGCTGAAAGTGGAAGGGGGAAATGTGGCATGTTGCTGAATAATATTGTTGATTATTGTTATAACGACTACTGGATTCATCGCCATAATTGTTTTTGTGACGATTCCTGCAGTGCTAATTGCAATGTCTGTTTGGAAAAGATTCACTTCAATAAGGTATTGCGCCACTATGATTGTCGCAGCATGATTGATTATTATGTGTGTAAGTATATTTATCGCCAGGCATCGGAAATGGCTGCCTTACTCAGGTGTCTTCCCTGGCCCAGAGCTTTGCGCTCTATGCGGGTGCTTTCCATAGGTTGTGGTTCTTGTAGTGATTTGTATGCATTTTTGTATCATATGGCACAAAAGGGAAGTCAATTGAAATTGCAGTAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCCAACGGCCGTTAATCCCTGTAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.64 Confidence: HIGH] # Array family : NA // Array 2 250905-252063 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQWN01000001.1 Desulfurispora thermophila DSM 16022 B064DRAFT_scaffold_0.1_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 250905 37 100.0 39 ..................................... TGAAAAAAGATAGGCGGTTGTATGAACTTATCCTTCAGT 250981 37 100.0 40 ..................................... AAACACGGGATAGATTACTATAATGCAGAGAGTATTTTGG 251058 37 100.0 35 ..................................... AGTACCTTGCAAATTCGCCCCACGAAGGTCGGCGC 251130 37 97.3 37 ............A........................ CTTTCCATTATACAACCGTCAATATTATACATTTTTG 251204 37 100.0 40 ..................................... GGACTATGCCGTAGTTACGGGCATGAAGCCGGACAGCAGA 251281 37 100.0 36 ..................................... AGGGTTAATTTCCATCCTATGAAGCGGCAAATGAGG 251354 37 100.0 38 ..................................... TCCTTCCTCGCGGAGCTCAAACGTGGAACGACTGTGGT 251429 37 100.0 39 ..................................... AGCTGGTAGAAATGGCCGATAAGTTTGGGTGGGGGCGGG 251505 37 100.0 37 ..................................... ATGCACCAGACAGAAATATCTGTCCGAAAACTGCTCC 251579 37 100.0 38 ..................................... ACCCACCACGCGATCCAGCACCACGCGCAGAAGCGCAG 251654 37 100.0 37 ..................................... CCACACACGGTCCCGCTTCCGGCGCGGGACCGGGAAC 251728 37 100.0 36 ..................................... ATCGAAGAACTGCACAGCACTGTGGTTTCTTTGTTG 251801 37 100.0 38 ..................................... AATCATATCCGACGGCAGGACCACCTTAGTAGCCCGTT 251876 37 100.0 38 ..................................... AACGAATCCATTGAGACACGGAACGAAACCGCCCAGCA 251951 37 100.0 39 ..................................... CCATCGCACATAAGTGCGATATAACCCTCGATGGGCCAA 252027 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 16 37 99.8 38 GTGCCAACGGCCGTTAATCCCTGTAAGGGATTGAAAC # Left flank : CCATGGAGCCAATCCGGGGCGCAATAAGTTTATTTTTAAATCAACTAAAAAATCGCATATACGATTGTTTTACTCACCGGTTTACCAAAATGGTTTTTTAAAACTAAAAATTTATGATTATGTACGCGGTGATTTTGACCATGAAATATACATACAGGAATTCAAGCGCAGGCTGAAAGCACTTCCAGATGAGCAGTTTATCACCATCCCTCTTTAAAAAATAGATAGCTGCATCCCTTTTAGCTCACCTCAAAAGGGGGGCAGTTATTCACCGTGTTCATAATTTTTGTGTAATGTAAAATATGGAAAACGCGCGGATCGAAGCTGTGGCCATTTTTCCGGGAGATCCGCGCGAATCCGCAAAAGCTTGTGGTTATTGACTTTGGCGCGATCGATGTGGTAAAATTTAACCGGTACTGAAGGCCGGGAATGAAGTTTTAAAAAGGATCCGCGCAAAATGCATTTTCAGCCCTTGCCATTCCTGGCCTGCGCGGGTCGCG # Right flank : CCGCTTAATGATAATAACCCCTACCTGATAACCGAGGTGGGGGTTATTTATGTTGTTACTGTTTTTTTGAGATGCATTTTCTCTTCGTCAAATATCGACAAAAATTTGTATACTGAGAGGCTATAATGATATTTGGTAGATAGTATTCCTGTACTGGCAATATCTAAAAAGGGATGATACCTGTGCATTTAATTACTTCTATTGGCAAAACCAAATATCAAACTTGTACATACTCCTGGGATGGCCGGGAATACAGCACGCCCTTTGCCCCCGTGGCGCTGGCCCATCTGCAAGGGCTGCGCGGAGCCAGGGCCAGTGTGCTGGTGACCGCTGCGGCCAGGGAAGCAAATTACACTCCGCTGGCGGAGCAACTGCTGCAGGCCGGTCTCGAGCCCCGGGCCGTGCCGGTGCCCGAAGGGCGCGATGAGGCCGAGATATTGCAGATCTTCCGGATTATCACCGATTTGGTGCAGCCGGGAGAGAATGTGGTGTTGGATGTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCCAACGGCCGTTAATCCCTGTAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,1.05 Confidence: MEDIUM] # Array family : NA // Array 1 170173-173126 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQWN01000007.1 Desulfurispora thermophila DSM 16022 B064DRAFT_scaffold_6.7_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 170173 30 100.0 38 .............................. CCTGGGGGACAAGGGATATGTGGAGTGTCGCCAGCTTG 170241 30 100.0 36 .............................. TTAATAAAACTAATTATCCCGTTAATAGCACCTTTA 170307 30 100.0 37 .............................. TAGCTTTTATCTCGGACCATCACCTGTAAGCCTGGAT 170374 30 100.0 36 .............................. ACCATTTTCTCCAGGTCATTCAAGTTTACCCGGCCT 170440 30 100.0 37 .............................. ACGCGGTGAAAGAGTGGCTGGAAGGACCCGGCGGGAA 170507 30 100.0 36 .............................. GGTTGTCTAACAGACAGCTTTCGAGCCGGATAAGCG 170573 30 100.0 36 .............................. ATGGGTGAGACGGGCCGGTATCGCACATCAAATACA 170639 30 100.0 37 .............................. GCCTTCTCAATTACATACAGCTTCCCTTCCCGCATCC 170706 30 100.0 35 .............................. ACACGGTAAACCGGGCTAATTGTCCGGGGGCAGGT 170771 30 100.0 36 .............................. TCCGTCCCATGTCACCTTTCGGCCCAGCGCCTCTGC 170837 30 100.0 36 .............................. AGGGCTACGTTCAGCTGTGTTGGTCACCAGACCTGA 170903 30 100.0 36 .............................. TGCTTCTGTGCGAATTGAAGTCCGCCGTGGTGAAGA 170969 30 100.0 36 .............................. AGCAGCAGGCTGGCACAGGTGTGGCGCAGCGAGTGA 171035 30 100.0 35 .............................. CGCTCCGCGACCTCTACGCCACTGTCGAGCGTCCG 171100 30 100.0 37 .............................. GCACATTGCGCCGGGCTAGCCGGGTGTTTTTTATCTG 171167 30 100.0 38 .............................. TCTGGACTGTCCTTATAGGTTCCGAGGCCGGTGGAGTA 171235 30 100.0 36 .............................. ATGCAGACGGCCGTGTGCTGGTCGACAGGCTACAGG 171301 30 100.0 35 .............................. TCCAGGTGGTGCAGGAGTACGGCGGCTCAATATCC 171366 30 100.0 36 .............................. TTCCTCGGCAATCAACAACGTAAACCTTGGCCCAAC 171432 30 100.0 37 .............................. AAGCATTACCCGGTACAGGCGGGATGAAAGGAGCCCG 171499 30 100.0 37 .............................. TCTGGCCGGTAGGTATGAGTAACTTATAAGGCTAAAT 171566 30 100.0 40 .............................. CCGACCTCTTGACTTAACCCTATGCAAAGTGTATCCCTGA 171636 30 100.0 35 .............................. ATGTATCTGACCGATTTTATCATGGAAGCAAAAAG 171701 30 100.0 34 .............................. ATGAGCATATGAAACAGAAAGCACAGAAAGCCAA 171765 30 100.0 36 .............................. TGACTTAGTTTTTGATATTTATTGTTTGGTTTCAGG 171831 30 100.0 38 .............................. CGGGAGTGTGAGGTGCAGACTATGTTTCTGCCCCTGAA 171899 30 100.0 38 .............................. TTCTGGTGGGAAGGCGATCCTGCGGAATGCCCCCTTTG 171967 30 100.0 38 .............................. ACCCATTGATTAAATGTCATAAAAGCAAGTGTATCCTG 172035 30 100.0 37 .............................. TCAAAAAAAATCGAGGGATGGTGGAGGCGAAAGAGCA 172102 30 100.0 36 .............................. AGGGACCAAGAGTTCTCGGCCCCCCGGATGAATACC 172168 30 100.0 37 .............................. CCCGGACCCTGGAAACTTGATCAGGGGTTACCATATG 172235 30 100.0 37 .............................. CCACATTTTGTCTGTCACTGTCCCCGCCCTCCTGCTG 172302 30 100.0 36 .............................. CCTTTTTTCCAGATACTGGGGGCCGCAAACCCGTGT 172368 30 100.0 36 .............................. AATCAATACCAAAGTGGTTAAAAAATCCTCTACCAA 172434 30 100.0 36 .............................. TACCATGGAGGAACGCTGATATGCAACAGCAACACA 172500 30 100.0 36 .............................. CCATTTCCTTTGAGCCGGCCACACTCAAGACCGTGT 172566 30 100.0 37 .............................. TAAATATTAATAATCTTCCAGACCTCCGTAGGTCACC 172633 30 100.0 35 .............................. CCTTTTTCAGTTTCCAACCCCGGTTGCTGGACCGG 172698 30 100.0 35 .............................. CCGGGAGCAGGTGGGCAACGCCCCCCTTCCGCGCA 172763 30 100.0 35 .............................. AGCTTCTGGTCAACGGCTTCACCCAGAAGTGCTAT 172828 30 100.0 39 .............................. CCCGCGCATTGCCACCGAGGTTCCTTCCTCCACCCGCGA 172897 30 100.0 36 .............................. ATATCATCATGCACCGACATATCTTCAGTTCCTTTC 172963 30 100.0 35 .............................. GCTAAGAAGGCCGTCAGCCCGTCCTCGGTAACCGG 173028 30 100.0 39 .............................. ACGCCGTGCTGCTGCAGGTATGCCAAAGCCACAGCCACA 173097 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 45 30 100.0 36 GTTCGTAGCCTGCCTATAAGGAATGGAAAC # Left flank : CTGGCCAAAAAATATGTGGCCTATTACGGGGAACCAGTACCGGATGGTACGGTGCAGGTACGACCGCTGGACCGGCCCCGCCTGCATGTAATGGACTACAAGGGTTCGGTGGTGAAGGGGTACACCGGCCGCCTGCGGCTTATCGGTCCGCGGGAACTTTTGCAGATAGCTCTGGACGCCGGACTGGGCAGTAAAAATGCCCAGGGTTTTGGCTGTGTGGAGAAGGTGGAAGGGAGAAGAGAAAAGGATATTGGGGGAACGGTGTCTTGGTAGCTTATGGGAAATTGTGATATTGAAAATGAGCAGGGGTGAAAGTATAATTTAAGACAGAGATAAAAGGCTGGTTTTGTCGTCGACCTCCAGTAGCGTAAAAATACCGGGGGGTCGACGACAATTGCTGGTGGCGTGAAGCCTTGGGAAATCAGGGTTGGTAAATTGTGTAGGTTTGCATCCAAAAAGCGCCCCTCACAGAGAGTGCTTATTTTTAGCGCCTCGGAACG # Right flank : CCCTCATGGGTATGGGCTTTTGCCGCTTCGCCCTCCGTGTTCGTAGCCTCTCTCAGTAAAGTCTCAATATCTTTAAATATCTCGTCATTTCAGCCATTTTCATTTTTTATGGCTTTGATCATGAGCCATATAATTGCATTTGTGTTAATATATGGTATTGAGTATCAGCAATACACCAGGGGTTTTATGGATAGTAGATTTCGCGCACTGATGTTCTCCATTTTTGCCCTGGTGGTCTACCCTCTCATGTCTCCCGGGATACCTGTAAACAGGCCGTAAGCGTCAAAAATGGGCTGAAAGTTTCAAACGTGAGTTTAATTGTTTGACAAAAGAACAGGTGTTTTGGTTCCGCGTCACCTCCTGAAAATAAGAAAACCACCGGGTGAGCGGTGGTTTGCCAGCGGGGTCTAATGCACAGTTTTCTTTTGTAGTTCCAACACTTCTTCCAGGGGCAGGCCGGTGATTTCGCTGACCAGTTGCGGGTCTAATCCTTTGCGCAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTAGCCTGCCTATAAGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [50.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 183534-191401 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQWN01000007.1 Desulfurispora thermophila DSM 16022 B064DRAFT_scaffold_6.7_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 183534 30 100.0 38 .............................. CCGGAGTGCCAAATAGTACCGCTAGCAGACACCGGCAA 183602 30 100.0 36 .............................. TGGTTCCCGTAAACGCCGTCAAACCTCTAATCGAAA 183668 30 100.0 35 .............................. CCCACATGAGGTTTCCGACCGGGTAATTGCACTCA 183733 30 100.0 37 .............................. TGGATCTGTTGCGCCCCCAATCCGGACTTGGCCAGGA 183800 30 100.0 35 .............................. GACGCCATCGGCAAGGGAATTTCCGGTACAGAAAT 183865 30 100.0 37 .............................. CTGGCCTTGGGCCGGCAGTCCTGACCGTCGCCGGCCT 183932 30 100.0 37 .............................. CAGATCCAACCTGTCCCTGTGCTCCTAATACCCTAAG 183999 30 100.0 38 .............................. CCGGCGTGACGGCTGTAACTAACCCGGTGGCGACGACC 184067 30 100.0 37 .............................. ATGTCACCTATGAGGGGCTAAAACGGGATATGCGTTG 184134 30 100.0 36 .............................. CTGCACTTATATCACCAATCATGCCTGTTGTAAGTG 184200 30 100.0 39 .............................. CCTGCCTAACATTCACCAAACAATCAATCACTTCTTTCA 184269 30 100.0 35 .............................. TACCATATGACATATATTTCGCGCAACATCTTTCG 184334 30 100.0 37 .............................. CCACAATAAGAACAAGGTTCATTTACCTTTGTAGTTT 184401 30 100.0 38 .............................. GCACCCTGTATGGAGGTATCGTATAAATCAGCTTCCTC 184469 30 100.0 36 .............................. TTGGGGTACCCTTCTTCATCGTACCCCGACAGGATT 184535 30 100.0 35 .............................. CTGCTATCGGGATTATAACCAAATTCTTCTGCCCA 184600 30 100.0 36 .............................. TATAATATAATAAAATAAATAAAGGAGTGATAATGA 184666 30 100.0 35 .............................. AAATACCAAATGCGATATAATAAATTGTTAGACAA 184731 30 100.0 37 .............................. ATTTCTGCAGGTTTGCTTTCTGCAGGTTGGCCCATCG 184798 30 100.0 37 .............................. TCTTTTCCTCCTTTCTCTGCCGCATTTCCCCGGCGGC 184865 30 100.0 35 .............................. GGGAAATAAAAAAAGCGCTCTAGTGAGCGCTAAGA 184930 30 100.0 41 .............................. CTTCCTGCAGGTCAGCACCCTGCAGGTTAGCCTCTCGCAGG 185001 30 100.0 36 .............................. CTCCGGTTTCGGCTAGGGTCAGTGCCCGTGTGCTAG 185067 30 100.0 36 .............................. CCGCCCCTGCCGTGATGTCTTCAGAGCTTTGGGGCA 185133 30 100.0 37 .............................. CTCGTGCTCCCGGAAATGGGAAATGTTTCCGGTTTTA 185200 30 100.0 36 .............................. AAAGATACAACGAACTGGAGCTGGACCTGTTGGTTA 185266 30 100.0 36 .............................. TTCGCATTCTTTGCACCATTTACAATCATCTTCCTC 185332 30 100.0 36 .............................. CCAACAAAGCAGGTGCAGGCCTGTTCGTGTCAATAC 185398 30 100.0 39 .............................. CCCGCAAGGTGCTTTGCACGACGGCCTTCCGATGCGTCG 185467 30 100.0 39 .............................. GTATTTGCCCTTGGATAATGTCTATTATGCCACTACTCA 185536 30 100.0 36 .............................. CGGATGCACCAGCGCCTTGACCGCTTCGGGCAGTAC 185602 30 100.0 36 .............................. CATTATTTCCCTCCACTTTACGCAGTGCCTCGCTTT 185668 30 100.0 39 .............................. CCCCTACCAGTGGAACCCAACACCATACTTGAACGACAT 185737 30 100.0 37 .............................. CCATCGGTGGGATGTAGGTGATCAGATCCCCGTTATA 185804 30 100.0 36 .............................. GGCCTTGAAACGCTGACAGGAGGAAAAGCCAAACTT 185870 30 100.0 37 .............................. TATCTAACCAACACCGCAAGGCCGTTCGCCATCCAGA 185937 30 100.0 36 .............................. AGGCCGAGGGGACCAATACCGATGAATACGTAATTT 186003 30 100.0 35 .............................. ACGCAGGAAGCTACCGGCCATGTTGGATACATCAG 186068 30 100.0 35 .............................. CCCGGACCTGGCTGGCATTAGCACAAATGAAATGA 186133 30 100.0 38 .............................. CAATGTTGAACGGGACCGGGCCATCCCGGCCCGGTTGG 186201 30 100.0 35 .............................. AATATTTAATTGTGCCGTCGCGCATAAGCGCAACG 186266 30 100.0 36 .............................. CCCTTTCCTGGCTAGGGTCTGGTTCCACGCTGGCAA 186332 30 100.0 35 .............................. ACCAACATGCCTGCAGTTCTTTTGGAATGTTTGTT 186397 30 100.0 36 .............................. CTGCACCGCGCCCGCCAGATCAAATTTTCCGCGAGA 186463 30 100.0 36 .............................. CTGGAGAGGTTGAAAAGCCGCAAGTTCATCATGGCC 186529 30 100.0 38 .............................. GCCCAAGCGTCAGAGAAAAGACGGGCCGAAAAGTAGGC 186597 30 100.0 37 .............................. GGGGACGAAAATTTTCTGGATGGTTTAGCTAATGAAA 186664 30 100.0 38 .............................. CCGCGAGCTTCGCCCTTCGACGGCTTTCCAGCCCGGTA 186732 30 100.0 36 .............................. CCGGGGACGACCCGATGCGGACCATCGCCGACCTGG 186798 30 100.0 35 .............................. TGCACAAAAGCCACCATGCGAATAGCCTTATTTTC 186863 30 100.0 37 .............................. TACCACAGGAGGCGGTTTTGGTGCAAATCAATCTTAC 186930 30 100.0 38 .............................. TACTCCTGACAATAGGCTTCTATTGCCAGGTTAATAGC 186998 30 100.0 36 .............................. TGGAAGAAAGCGTCATGCGGACGCTGGCCACCGTGA 187064 30 100.0 37 .............................. AGCTGAAGCGCAGGCACCCGGAGCTGTTCTGCAAAGC 187131 30 100.0 37 .............................. TCTAAAAAGACAACTTTTCCTTCTTTTTCGCCCAGCA 187198 30 100.0 36 .............................. TTGAGTACGGCTGCCGTGCGCCTATTGCCGGCGAAG 187264 30 100.0 36 .............................. CCTGCTACTACCAGCGACATGAGCACTACCCCCATA 187330 30 100.0 35 .............................. CCACCGTCCCGGTTTTCAGCGCAGCCAGTCTGATG 187395 30 100.0 35 .............................. ACGAGTATGGAAAATAGATTACAAAGATTTTATGA 187460 30 100.0 36 .............................. CCGCATCTCCCTGCATGATTTTCTCGAGCAGTTCCC 187526 30 100.0 36 .............................. GGGTGAAATTCAATGGAATCGTAAACTATTCCAACT 187592 30 100.0 36 .............................. CATTCCCCGCCGCCGCCGCAGTCACTTTTGACCAGG 187658 30 100.0 35 .............................. TCCTTTCGAACTTAAATTTAATAGCGAGTTTTGGA 187723 30 100.0 36 .............................. AACTTTGGGCGGCTAAAATACTACCAATCGCGGAAA 187789 30 100.0 36 .............................. TGCTTTGAAGTGGATTAACAAACAGTATCCTATTCC 187855 30 100.0 36 .............................. CCCCAGTTGTGCAGGATGAAATTCCGCTGCCCCAGG 187921 30 100.0 37 .............................. CGGCTGGGCCTGGTGCGAATATGCCGACTGCCCGGTG 187988 30 100.0 36 .............................. GTGTGAGCCACAATGAATATTCTGTCCCGTCTGTGC 188054 30 100.0 36 .............................. AATAGCGCGGTTGATTTATTTGGATTAAGCCACCCA 188120 30 100.0 36 .............................. AAAGAAATTGCCCGGTTTTTCGGTGTGCCGCTTTAC 188186 30 100.0 37 .............................. CTAATTTGCTTACCCAGTTACAAGCCGTAGCCCTACC 188253 30 100.0 37 .............................. GCCTCACGGCCACCCCGGCGCGGATGGGAGGCGAAGG 188320 30 100.0 37 .............................. ACGGTATCCAGGCAGCGCACCAGGTTTCCGCCCTTGA 188387 30 100.0 36 .............................. ATGTTGACCTGATCGAGATATCGCCAACCCCGCTAC 188453 30 100.0 36 .............................. TCCTCCCTGTACGAATACCTTGACGAAAAATATTTT 188519 30 100.0 35 .............................. TCCTGTAGGTCTGGTTGAAGTTGACAATAAACTTG 188584 30 100.0 36 .............................. ATGAGAGACACAGGGAAATGCATCTCATGTGTGTAG 188650 30 100.0 36 .............................. CCGTCGGTGTGGCTTATATGGCCATGTTGAAAGCGG 188716 30 100.0 38 .............................. CTCATTCAGGAAGAACTGATTCATCTGGAGGACACTGG 188784 30 100.0 36 .............................. GTGTCATCGCCAGGGTATATGACGGGCTGCAGCAGT 188850 30 100.0 36 .............................. ACCCAGAAAATGCGCAACCGAAAGGTGGGTGGATGA 188916 30 100.0 38 .............................. TCAACCGCGAGGACGAACTCTCTAGCCTTCCTCGTCAA 188984 30 100.0 36 .............................. CCAACTCATCGGCTATGGCCGGGGTGGGGTCATCGT 189050 30 100.0 35 .............................. TTCCTTCAGCTCAGCAAGCCAGGCATGCAGTGTGT 189115 30 100.0 36 .............................. CAACTTCGTGCTGGGCCTGCCGGTCATCGGCGGGGC 189181 30 100.0 37 .............................. CCCGGTTCCCGGCCAGCACGCTCGCGCCAGCGCTGTA 189248 30 100.0 36 .............................. TACCAAATCAGCCCCACGTCTTCTGGTAGCTCCTCG 189314 30 100.0 36 .............................. GGGCGCCGGCGACCTGCTCATTCGGTGTGCTGCCCA 189380 30 100.0 39 .............................. GCCAGGGTGTGCTGGTGGGTCTGGCGGTCGCTGACCATG 189449 30 100.0 38 .............................. TCGTCACCTACTGGAAGGCGCCTGAAGAAGTAAGAGTC 189517 30 100.0 36 .............................. CTCGCTTTTCGGCGTCCTTTATTTCGTCAATTCTGA 189583 30 100.0 35 .............................. CATATAAACCCCGGCCTGCTTCGCATATCGAGGGA 189648 30 100.0 35 .............................. GTCCAAGCCGCTGGATAGTCTGCTGGACCAACAAA 189713 30 100.0 35 .............................. CCAGGCCGGAGTAGGCATCTTTCAGGGATTTCTGC 189778 30 100.0 35 .............................. ATCGAAAAAACTGGGAACAAAATAAAGATAAATAC 189843 30 100.0 37 .............................. GCCGCCGGCCGTTTTCGATTTGTTGCTGCAGGTCGTC 189910 30 100.0 36 .............................. AGCGCTTCAACGGCACACTTTATGCATGGGGGTTTT 189976 30 100.0 36 .............................. ACGTGGCAGCAACTGTAACCCTGGCTGAAGATGCAG 190042 30 100.0 38 .............................. CCGGCAAGCCCATCGACAGTCGGCGGTACCACAACCTG 190110 30 100.0 36 .............................. AAAACCATCTATTTCTTCGTCCTCCTTTAACAGAAG 190176 30 100.0 35 .............................. ATGCATCTGTCGAGGGCGGCCCGGAATATGCTCGT 190241 30 100.0 36 .............................. TAGGCAGGCTACGAACAGTTCTTGGCGTCCAGCTCG 190307 30 100.0 35 .............................. CTCACAATCTGCTCGATTTGGGCTATCTGCTCTGA 190372 30 100.0 37 .............................. CCATGCCTGACCACACACAGCTACTGCCAGGCAGAGC 190439 30 96.7 36 ...........A.................. GAGGGCAGTGGAGGCTGGACAAGAGTCACCTTAACA 190505 30 96.7 38 ...........A.................. GTGCTCGGGGAAATCTACCTGCCACCGAATGCGAATGC 190573 30 96.7 35 ...........A.................. TGGGGCAACGGGTACGCCTATATCGAACGGGACGG 190638 30 96.7 36 ...........A.................. ATGAGCTGGGCATCCTGCTGAACACTCCCAGGCTTC 190704 30 96.7 35 ...........A.................. TATGCGTCTTCAAGAGCTTTGGATAGGACCCGGTG 190769 30 96.7 37 ...........A.................. CCAACCGGCACGAAATAATTCAACCAAGACGCCCACT 190836 30 96.7 35 ...........A.................. AGAACTTCACTGCTGGCCTGGCTGCCGTCCAGTTC 190901 30 96.7 37 ...........A.................. TCAGGTGAGAACTGGATAGTCATACCCTGGCTACACC 190968 30 96.7 37 ...........A.................. ACATCGACCAGGCCCGCATGTACCGGCGAAATGTACC 191035 30 96.7 36 ...........A.................. CCCCGTACCTGGCACATCTATTCCGGCGGCGTAAAG 191101 30 96.7 37 ...........A.................. CTCGCTTGAATATCTTTTTTATCGGGATGAACAAGAA A [191120] 191169 30 96.7 36 ...........A.................. AGTCCCTACTGCACCGCCCGGACGTGCAGGAAGTAA 191235 30 100.0 39 .............................. CCAATATACCTTCTAGTATACCTACCTCTGTCGCTGGTA 191304 30 100.0 38 .............................. CCGGCGGCAGTCGCCGGCGGGGACCCCCCTATCCCCCC 191372 30 96.7 0 .......A...................... | ========== ====== ====== ====== ============================== ========================================= ================== 119 30 99.6 36 GTTCGTAGCCTGCCTATAAGGAATGGAAAC # Left flank : CCATCTTGGACTGTATGGATTACTCGCTGAAAACACAGGTTGTGGGAGATGACGTTAATTGTTTGTAATCCTGGTGTACGATGTAGCCCAGCGGCGGGTGGCCAGGGTGTTGAAAAAGTGCCGCCAGTACCTGCACTGGGTACAGAATTCTGTGCTGGAGGGAGAAATATCCGAGGCCAACCTGAAAAAGCTGAAAATGGAGCTGGAGAGGATAATAAACAAGGAAGAGGATTCGGTGATCATCTACCACCTGCGCACTACCCGGTACTCCTCCCGGGAAATTATGGGATTGCAAAAGGGCGGGGATGAAAATATAATCTAAGACAGGGATGCTCCGGGCGGATTTGTCGTCGACCTCCAGTAGCGCAAAAATGCCCGGGGGTCGACGACAACTGCAGGGGGCTTCAGCCCCGGAAAAACAAGGATTTGGTAAAATATGTGGGTTTGTATTGAGAAAGCACCCCTCGAAGAGAGGGCTTGTTTTTAGCGCCTCGCAACGG # Right flank : TAAGAACAATATCATATCCAAATTTACGACTTTGAGTTCGTATGCTTTTGTCAACACAAAAGTTGACCACCAGTGCTAGAGCAAAAGTTGACCGCACCTTGCTGGCAGAAGGTAAACAGGCAGATTAATCAGAACATTTATCGGTTACTTGTTTTTGAAACATTTGCTCGATATATGCGGGATGAAAGGAGCCCGTAGGGCGACTGGAATCCCGCATATATCGGCGGCTCAGCCGGGTGATTTCCCGAAGCACCTCTTGCGTTTATTTTTGCCCTGGCTTTTCTTAGCTTTCTGCAGCAGGACTGGCTTTTA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTAGCCTGCCTATAAGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //