Array 1 47137-45615 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASGM01000050.1 Acinetobacter baumannii TG27399 TG27399_51, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 47136 28 100.0 32 ............................ TAACGTGGTGTGAGCCGAGAACCTGCAAGCCA 47076 28 100.0 32 ............................ TTTTGATGAGCAGGTATTTACACAATATAAAT 47016 28 100.0 32 ............................ TGATCAAGAATGATATGTACTAGCTCACTATC 46956 28 100.0 32 ............................ TTCGAGTCATAATTATAGTAAAAAGTCATCTT 46896 28 100.0 32 ............................ TACATAAAAATGCGGACCCAACGATAAGGATT 46836 28 100.0 32 ............................ ATTAATCGAGGAAAAAAAACATGAATGTTAAT 46776 28 100.0 32 ............................ ATCACTTAACCCATCATCAATAAGTTGGCCTT 46716 28 100.0 32 ............................ AGTCACCATTGTTCGAAGCTGTTGGGTCATTA 46656 28 100.0 32 ............................ TTGTTGCATCATTTGCGACTCATGACTATTTG 46596 28 100.0 32 ............................ AAATACAAAGTTAGGTATTGGTACTGGTGAAA 46536 28 100.0 32 ............................ AATATCCACCAATGATTTTGGTAAAGATAGAG 46476 28 100.0 32 ............................ AGACACATACGTAATGGTGTCAATATCGTATA 46416 28 100.0 32 ............................ TGCCCCAGCGAGCAAACGCCTTAAAAATCCTG 46356 28 100.0 32 ............................ GAGATTTTTGTGCGCTTATAGAACATGAGCTT 46296 28 100.0 32 ............................ GTAGGGATAGTGAGATTGTAGACCTTACAATG 46236 28 100.0 32 ............................ CCGCAGATTTACGGATGCCTGTAACTGTCATG 46176 28 96.4 32 ...A........................ TATCATGAACATTGTTCCTTGACCCACGGGCA 46116 28 92.9 32 ...A.....T.................. ATTCGATAGACTGATTCTATAAGCTTATTTGC 46056 28 100.0 32 ............................ TGTTTCGCGTTGAGGTCCGGGTAATCGCCTAT 45996 28 82.1 27 ....C......TCC..........T... GTCTTGTATCCTGATTTCAAAGATTCA 45941 28 92.9 32 ....C....T.................. AAACAACGAGCCTTGTCGCGGGTCGCCCATGT 45881 28 96.4 32 ...A........................ CAAATCAAAAGTGCAGTTGCTGCCTCAATAAC 45821 28 96.4 32 ...A........................ TCTTCATCTGTTACATATGAAGCAAGGATCTT 45761 28 92.9 32 ...A.......T................ GTCAAACGACAGGGCTATAAACACTTAATCTT 45701 28 96.4 31 ...A........................ ACATTCAAAGAGGCTCATCGAATCCAATCGA 45642 27 78.6 0 A..T........TC........C.-... | A [45638] ========== ====== ====== ====== ============================ ================================ ================== 26 28 97.1 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : TTTAAAAATAGAAGCCGTTTTACCTGCATTTGCCTGATAATCGGTTGGAATAAGGAAGTCCTCATTTAATAAAGTTCGAGCACTAAGATAGGGTAAATCAAGTGCTTGCTGTTTACTTAAACGAATCCCGCCTTTTTCAATATTGGAGTTAATCGTCTTTAAACTAAAGTGTACTGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATCTAGCCAATTTTTAACACATTATTTGAAAAATGAAAGTATTGAAGGTGAGAGCTGCGACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCATAAATTTAGCCTAAGACGATTAGGTTATATTTTTATAAAATTAGAAAAATTAATATAATTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : TTTCTCTTTCGAAATTTAAAACGACATGTTTTGTCGTTAAAAGGCCGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAATATTATATTTTTATTACATTCGAACTTTAACAATAAACTATGCATGTCATTCTCATCTCTGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCGATTGTGGATAGCTATGCTATTCGTACAGGACATTCATCTTGGCAAGCACCAATGACAATGGAAGGTTTAAAAGAAATTCGTAGCGCATTAAAAAAAGTAGCCACCCGACAAACTGCGGTAGCCGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTAGGAGCAAAGCATAAATTTGCAAACGATGGTGCATATCCAGTTGCATCGACCAAAAAACAACAAAAACTACTAATGCTAGATGAATGGGTCAAAGTAAGTAGCTTGTTGGCAGGTGCAGCAGGGGACATGCATGATATCGGTAAGGCCT # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [19-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 52227-55016 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASGM01000050.1 Acinetobacter baumannii TG27399 TG27399_51, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 52227 29 100.0 31 ............................. GTCTTTGCCAAGTATGTTAAAGACCCAGCAC 52287 29 96.6 31 ............................C TATTTATTTAAAAACATTAAACGATTTAATT 52347 29 100.0 31 ............................. ACTGTAGTGGGTCATAAGGAGATTTAGTTAG 52407 29 96.6 31 ............................C AACATATGGAATTGCAGCAACCGATGCATAA 52467 29 96.6 31 ............................T AGTTCATCAAATGAAACTAACGCTTCCCATT 52527 29 100.0 31 ............................. CTCAGGCAATTGTTGGGAAAAGTCGATTTCT 52587 29 96.6 31 ............................T GTTTCAAGGTCTCGGATAATTCCACATTCAT 52647 29 100.0 31 ............................. TATACATCGTTATTGCATTCTGCATATCCCA 52707 29 100.0 31 ............................. TTAAGAGAGGCTTGTTTAGATCAATACTTGC 52767 29 100.0 31 ............................. TAACAGGTCAAGTTACTGTTGACCCGGTAAA 52827 29 100.0 31 ............................. TAACCAAAATGAGAATAAAAAATTCTTTAAA 52887 29 96.6 31 ............................T TCACCTGTAGTAACAGTTGTTAGATAACCCA 52947 29 96.6 31 ............................T CTGGAGTCATGGGGGCTAATTTATTTAAACG 53007 29 96.6 31 ............................T TATCCCTCGATCTGCTGTAACGTGGTGTGAG 53067 29 96.6 31 ............................C CAAGGTGTGCGCACCAAAGCAAAACCAATCT 53127 29 96.6 31 ............................G CCCACAGGTTGAGCATCAACGGCCATCGAGA 53187 29 100.0 31 ............................. TCATAGAGCTCACTTTGTCGTTGAGCCTGCA 53247 29 96.6 31 ............................T TGTAAAACCTCTGGATTAAGCATTGCGTTCA 53307 29 96.6 31 ............................T CTTCCTGAGTTTTAATCCCATTTGCCTTACA 53367 29 96.6 31 ......T...................... AAATGACCATCAATCGACAGTGGTTTACCTT 53427 29 96.6 31 ............................C ATCTTCGCCAATTGCTTTTGGAGAGTTGCTA 53487 29 100.0 31 ............................. GAAGGTGCAGAGTTTTGGGACTTTGGGTGGT 53547 29 100.0 31 ............................. ACACGTTCTCTATATCGCTGTTTGCGGTCAT 53607 29 96.6 31 ............................T TCAGTTGGATATGCCTTTGATACCAAGAAAC 53667 29 96.6 31 ............................T CTCCCCCCTCCTCGATCGGCTGTGAAAGTAC 53727 29 96.6 31 ............................T TTAAATCGTCATATTAAGGCGCAGTTCCGAA 53787 29 100.0 32 ............................. AAGATCTGACCAGCTAAAACATTCTGGTTATC 53848 29 96.6 31 ............................T AGAAGCAGAAAATATCCAACTCATTGCTACT 53908 29 100.0 31 ............................. CATGGGAGCTTTCATTCATATATGTCATTAG 53968 29 100.0 31 ............................. CGTCCACGGTAGCGGCGCCAAGGCTGCCAAT 54028 29 96.6 31 ............................T GTTTTGCTAATTTATCAATATCGATTTTCAC 54088 29 89.7 31 ...AC.......................G GTATTAGTGCGAATTGGCTTTTAGCCCACGC 54148 29 89.7 31 ....C.......G...............T TAAATGCTCAACTACTTCTGTAGCTAATGGA 54208 29 86.2 31 ...GC........C..............T CTCAACTCATTGATTTTTTCTTCTCTTGCCA 54268 29 93.1 31 ...GC........................ TTTTTATTCCAAGGGCTTTTGCTTCTTGTGA 54328 29 86.2 31 ...GC......T................T TCAAATGATTTAATGAGCTTGTAGCCATTTT 54388 29 86.2 31 A..GC.......T................ CGTCTTCTAATGATGGACTTTAATCCAATAT 54448 29 82.8 30 A..GA.......TC............... TCTCACTGAAGATATGACCATCACTTTCTT 54507 29 75.9 31 CG..C.......CC......C.......T TTATAACCACCAGTTAAAGTATTGACTAAAA G [54509] 54568 29 75.9 31 ...GC.G...A..C.AT............ CAATCGGGGACGTGGTCAAAAAGATTATCAG 54628 29 93.1 31 ....A.......................G TGTTGATGTTGTTGTTCAGATCGTTTTTGGT 54688 29 79.3 31 ...GC....T..TC..............G ACATGCGAGCTTTCATTTAAATGTGTCATCA 54748 29 93.1 31 ....G........C............... TTAAAGCATTTTCATATGAGCCTTCCTCATT 54808 29 82.8 31 ....A......TCC..............T TCGGATCAGTCCAGTCATCATTCTCGTCAAT 54868 29 86.2 31 T..G........G...............T ATTATTGCGCGACAGAACGTATCAATTAATG 54928 29 89.7 30 ...GC.......................C AAGCTGATGCTTCCTTATGGTTACAGTCAG 54987 29 82.8 0 .G..C...................AT..T | G [54991] ========== ====== ====== ====== ============================= ================================ ================== 47 29 93.9 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCCAAAACGCTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGCAAAAACTCTCATGACCCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCCTTACCTATTTTACACGGTAAAACACGTCGTGGAGGTCTAGTCTTCGACCTCGCTGATCTAGTTAAAGATGCTTTTGTTATGCCAGTCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTTCGAATGCAACTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGATATATGTAGTAAAATCAAATAAAATCATATATTTAATCTAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTGAATCTTAAAAGAAAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATTTTGGTGATGGCGTCAATTGAACAAATATAATAATATACTGATTTATCTTAATTAATTTTTATAAAAAAATCCCAGTGTACATGACAGTGTACAAATTATATGTTGCTGGCCTATTTCCTTCGGGTTTGGTTGCTATATACGGAGTACAACTCATGTATTAAACACCTTACTGGCAATCCAGTAACACTACCCTACTCCACCACTTACACAGCATCACTTCGACATCTCGTCAACGCAATTTTGCGTTCGGCATTGTTTTCAAAAGTTTATCCAGAATTAGACGCACCTAAAACCCGATAAAACCCTATCAACTCTTATCATTAGCTCTTAATAAAACGTAGTCTTTTATCCAGGTAGCTACTACGAATTTCTCGTAGTAAGGCACTGTATTTGAAACATGGAAATGAGATTCCTTAAATTAGCGATAAACCTTGTTGTATATAG # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.35, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-57] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //