Array 1 33-458 **** Predicted by CRISPRDetect 2.4 *** >NZ_ARYO01000130.1 Clostridium tyrobutyricum DSM 2637 = ATCC 25755 = JCM 11008 strain DSM 2637 Contig487, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 33 29 100.0 38 ............................. TCATTTGTAGATGCGAAAGTATCAAGTGTCATTCCCGC 100 29 100.0 39 ............................. CGGGGAGTACTAGGGAGTTACAGTTGCAAGTCTGAATGC 168 29 100.0 38 ............................. CCATTTGTAGATGCGAAAGTATCAAGTGTCATTCCCGC 235 29 100.0 38 ............................. CATAAAAAATGCCATCAATATTCGTTCCAACCCACCAT 302 29 100.0 35 ............................. TATGTTGAAAGAAAGGGTAGAGATCCGTTTGACTT 366 29 100.0 37 ............................. TCACTGCCGGACAACTCAGTGTGGATTTTTTTAGATT 432 27 93.1 0 ...........................-- | ========== ====== ====== ====== ============================= ======================================= ================== 7 29 99.0 38 ATTTAAATACATCTCATGTTAAGGTTCAA # Left flank : TATGAAGTTCAAGCAATGTCAAGAGTAGAATAA # Right flank : | # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTCATGTTAAGGTTCAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [36.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 1 35-263 **** Predicted by CRISPRDetect 2.4 *** >NZ_ARYO01000162.1 Clostridium tyrobutyricum DSM 2637 = ATCC 25755 = JCM 11008 strain DSM 2637 Contig501, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================== ================== 35 28 100.0 39 ............................ ATGCAAATGATATAGATAGTAAAGAAGCAGAGGAACTTA 102 28 100.0 40 ............................ ATGCAAGATTTTTAGAATTACAGAAGAAAGCTGATGAACT 170 28 100.0 38 ............................ ATAATGGAGTATCAAGACAATCAGTATCTTTGTATGAA 236 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ======================================== ================== 4 28 100.0 39 ATTTAAATACATCTCATGTTAAGGTTCA # Left flank : GTATGTTTGCAGTATCACTATTAAGTTTTAAATCA # Right flank : | # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTCATGTTAAGGTTCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [41.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 34-255 **** Predicted by CRISPRDetect 2.4 *** >NZ_ARYO01000163.1 Clostridium tyrobutyricum DSM 2637 = ATCC 25755 = JCM 11008 strain DSM 2637 Contig503, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ======================================== ================== 34 26 100.0 40 .......................... CAATCTATTGTATTTGCCGTCACAAACATCAATAGCAAAT 100 26 100.0 40 .......................... CAATGCACTTCTTCAAGTGCTCTGCATTCATTAGGAGTTT 166 26 100.0 38 .......................... CAATAAAATACTATATCGCCTTTCGTCGCGTTTCCTTT 230 26 100.0 0 .......................... | ========== ====== ====== ====== ========================== ======================================== ================== 4 26 100.0 40 ATTTAAATACATCTCATGTTAAGGTT # Left flank : AATAAAAATAAATAGCAAAAATCCGTTAAACAGA # Right flank : | # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTCATGTTAAGGTT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.92%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [43.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //