Array 1 7-1234 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849336.1 Acinetobacter sp. CIP 102129 acLZm-supercont1.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 7 28 100.0 32 ............................ GCAGCCGTACCCACATGGTTCGCAAAATATTT 67 28 100.0 32 ............................ TTTCCCTGATTACCGTTGCAAGGTTCAAGCGA 127 28 100.0 32 ............................ ATCCCATCTTTTGATTCGTTTTTTCACCCTTA 187 28 100.0 32 ............................ ATATAGAATCAAACCTAAATTGTCCTGTAAGT 247 28 100.0 32 ............................ GATTCGCGCGATGTCGGGCGACTCAACATGGG 307 28 100.0 32 ............................ ATTGATAAACCTTTCGACTGGCGCGATCTGCC 367 28 100.0 32 ............................ TCGATAAGAGCCTGCGGAAGAATATGTCATCT 427 28 100.0 32 ............................ GTGATACACAAGCGTTTGGTTCACATACCGTA 487 28 100.0 32 ............................ AATAGCTGAATTTAAACCAGCAAAAGAGTAAA 547 28 100.0 32 ............................ AGTCCACTCGCAAACACTTCTTTCCAAAAACC 607 28 100.0 32 ............................ ATCAATGGGCAAAACAACATTTGCTCAAAACC 667 28 100.0 32 ............................ ACAGCTTAGAACCATTTGGGCGAACCTCAATA 727 28 100.0 32 ............................ TGAGTTGTCCGTTACAACTTCGTTGATTAAAC 787 28 100.0 32 ............................ TTGGCGCTTGGCAGTACCTTGATGATCAATTC 847 28 100.0 32 ............................ CAGCGTAACAACTGCAACAGGCGCAATTAGTG 907 28 100.0 32 ............................ GTTATATTCAGTTTGTGTCGCACCTGCGATTT 967 28 100.0 32 ............................ ATTGAGATGCAGACAACCCAATAAAATCACGC 1027 28 100.0 32 ............................ TTGTTGGTTTTCAATGTATTTTTTAATAATAT 1087 28 100.0 32 ............................ TGGACGAAGCCTTAACAAATATTAAAAGCCCT 1147 28 100.0 32 ............................ GTCACTATTTTAACCGCTTTTGCTTCCTCATT 1207 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 21 28 100.0 32 GTTCATGGCGACATACGCCATTTAGAAA # Left flank : ATCTTTG # Right flank : ATGGAATGAGCCAAGCTGATTGCAAACGTCTAAGTTCATGGCGACATACGCCATTTAGAAAGGAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGACATACGCCATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCATGGCGACATACGCCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [8.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.64 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1939-2446 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849336.1 Acinetobacter sp. CIP 102129 acLZm-supercont1.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1939 28 89.3 32 .......G..A......C.......... CGAAACCTCCTGCAAACCAGCAGGAAGCTTGA 1999 28 100.0 32 ............................ ATAGAGAATGCAATTGGAAATCCTGACAATGC 2059 28 96.4 32 .................C.......... GATAAAACATATTTGATTTTGGTGGGTCATCA 2119 28 89.3 32 .......G..A......C.......... ATTGCCTGCGGGTGAGCGTGGTACAGATGATG 2179 28 100.0 32 ............................ TGTTCTCTTACTGATGTATTCAGTCATGACGA 2239 28 100.0 32 ............................ TGCCATTCCATTTTTACGCATTGCATTTTTCA 2299 28 100.0 32 ............................ CGTAAAATTAGATAATTCTTCAATTGTCATCT 2359 28 100.0 32 ............................ TAATTAAGTGTGAGGGCACAGGCACGGCAGGA 2419 28 89.3 0 ..............G.........AT.. | ========== ====== ====== ====== ============================ ================================ ================== 9 28 96.0 32 GTTCATGACGGCATACGTCATTTAGAAA # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCATGGCGACATACGCCATTTAGAAAGAGATGCTGAGCGAGCGATCTTTCTAAAGAAG # Right flank : ATTGGGTTTCAATTATTGCCAAAATAAAATTAGGTTAAGGATATCCATCTAGGATAATCCATAATTTTATCTAAATATTAAAAAAAGATCCTGTCTACTCCTCATTTGAGGAATAGACACAATAGTGCTTTTCTCTAACACTAATCATATTGTGAAGTAAGGAGAATATCATGAAATATAAAATGGCAGCTGCTGCGGTCTTGGGTACTTTATTATTGGGAGGTTGTGGTGGTTCAGATGATGTCATTGATAATATAAAGCAAGAAATTGATGATAAAAATAAACCAACTGAAACGACTACCGCCAATTGGGGCCTTGAAAAGACGGTCAATACAATTACACACTCTGCTTTAAGTACCTTTGTTAATTTTGGTTTTGTTGATGCATTGGTCTATGGCGCTGATGAGGCTGTAGAGGGTACGCCTTGTTCTCAAGGCAACTATGTAAAAACAAGCGATAAAATTACCTTTAATAATTGTAGGGGTTTATTTGATGATGAT # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGACGGCATACGTCATTTAGAAA # Alternate repeat : GTTCATGGCGACATACGCCATTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: F [matched GTTCATGACGGCATACGTCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.68 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 830-21 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849333.1 Acinetobacter sp. CIP 102129 acLZm-supercont1.10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 829 28 100.0 32 ............................ GTCCACCAATACAACACCTGCTTTACAGGTAA 769 28 100.0 32 ............................ GTATGCCGTGAACTCAACGGCTTTTCGATTAA 709 28 100.0 32 ............................ GCGTTATTACAGCAACGACAAAGATCATACTA 649 28 100.0 32 ............................ ATTGAAACAGTATGTCATCCATTTACAGTTGA 589 28 100.0 33 ............................ TGCTGTAAAGATGTTTAAATCAGCGCTAATGAT 528 28 100.0 32 ............................ AGTTTTGTCTAACCACAATTGGTATGGTGATT 468 28 96.4 32 .........A.................. TTCTGAGCAACCATTGGATTTATCAGGCTGAT 408 28 100.0 32 ............................ GTTTTCGTACACTGGCCAACGATAAAGTAGAA 348 28 100.0 32 ............................ AGTTATAACGCAAGGTTTTAGGGGTTTCGTAG 288 28 100.0 32 ............................ GATAAAACATATTTGATTTTGGTGGGTCATCA 228 28 100.0 32 ............................ TCAAAGTCGCGGACTTTGGATGCCACATTTTG 168 28 100.0 32 ............................ GCTTAAAGATGCAATGGGCAATGTTGTTGATC 108 28 82.1 32 ...TT.T...G.T............... GCAGCCGTACCCACATGGTTCGCAAAATCTTT 48 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 14 28 98.5 32 GTTCATGGCGACATACGCCATTTAGAAA # Left flank : ATGGCGACATACGCCATTTAGAAAACGGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : AGCAGCCGTACCCACATGGTT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGACATACGCCATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCATGGCGACATACGCCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.20,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [13.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 5592-1306 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849333.1 Acinetobacter sp. CIP 102129 acLZm-supercont1.10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 5591 28 100.0 32 ............................ ACGGAATAAAACCAGTTGGATAATTATGATAG 5531 28 100.0 32 ............................ CCAAAAATTGACGCTCTCGGTATATTTACGAA 5471 28 100.0 32 ............................ ATCAAAAACTGATGCAATTCTTGTTGCTTCAT 5411 28 100.0 32 ............................ ATTCACACTTATCAGTAACTCCTACAGCTTGA 5351 28 100.0 32 ............................ CGTCAATATTCCAAAGCCGAAAGCAGGATTAT 5291 28 100.0 32 ............................ TGCCATTGTGGGGGCAATTCTTGCTCTTGTGT 5231 28 100.0 32 ............................ ACATCGGAATAATTGCCATATCGAGCGCCACG 5171 28 100.0 32 ............................ ACGAATTGACAGGAAGTCGTGCCACATTGGAC 5111 28 100.0 33 ............................ TCGGTAAATGTCCACAGGTTTGTCTGTGTTTCT 5050 28 100.0 32 ............................ TAACAAACCACCATTAACCCTGATCTCATTAA 4990 28 100.0 32 ............................ ACAGGCACGCGGAACTGGTGAAAAACCTTTGA 4930 28 100.0 32 ............................ TTGAGCGCTTGTTCTAACTCATATGCGACAAT 4870 28 100.0 32 ............................ ACAAGTTAAAATCGGTGAAGCATTTGAAGAAT 4810 28 100.0 32 ............................ GATCCATGGAAAAACCCCAAACGATTGTAGGT 4750 28 100.0 32 ............................ AAACCATCTGTTTTATAGTTAATTGCAGCAAA 4690 28 100.0 32 ............................ ACTCACACTTATCAGAAATTCCAACAGCTTGA 4630 28 100.0 32 ............................ TAAAGAACGTGTAAAAAATTGTTTAAAAAGAC 4570 28 100.0 32 ............................ TGTTTAAGTCAAATTGATTCCCCAAAAATTGA 4510 28 100.0 32 ............................ CATGGAATAAAACCAGTTGGGTAATTGTGATA 4450 28 100.0 33 ............................ TTTTAAAAATACCACAGGCATTAAGTGTCATCG 4389 28 100.0 32 ............................ TAATAAGTTTAGGTTGTTATCAGGTGGGCAAA 4329 28 100.0 26 ............................ ANNNNNNNNNNNNNNNNNNNNNNNNN 4275 28 100.0 32 ............................ TGAGTAGTAGTAGATGAAGTAAGGTACATTAA 4215 28 100.0 32 ............................ TGCCAAGACTTCTTCAAACCTCAGTCCAAAGT 4155 28 100.0 33 ............................ CTTGCAAGTAATTAACAGTACAGATTTAAATGA 4094 28 100.0 32 ............................ TTGGAACGCAATTGCGGCGCAAATGGATACTC 4034 28 100.0 32 ............................ GCCAAAAATAGAAGAATCCACTGCTTTTGGTT 3974 28 100.0 32 ............................ GTTGTGAATAAGGCTTTTAATGTTGCTGAGAA 3914 28 100.0 32 ............................ TGTCGAGCCATCTTTAGTAGTAGCAATAATTT 3854 28 100.0 32 ............................ TATAATACCTGTGGTCCAGTTACCACGATCAT 3794 28 100.0 32 ............................ TGCTTTTATGACAGGTACACAGACATGCCAGA 3734 28 100.0 32 ............................ AGAATATGGTTCAACCGCTTCTTGACTATATG 3674 28 100.0 32 ............................ TATAATCGACAATAGAAACAAAGAAAATGAAA 3614 28 100.0 32 ............................ ATGTTGTGTTATAAGTAATCCGCTTTCCATAA 3554 28 100.0 32 ............................ ACTGGGCAAAGTAATGTGGTCTTGTATTGTTC 3494 28 100.0 32 ............................ TCTTTGGCTTAGGACTGGAGAACACTCGACAG 3434 28 100.0 32 ............................ CCTGTAGGGTTCGACACCCCTTAATAATAAGA 3374 28 100.0 32 ............................ AATCTAAGTAATGCATGGCTGAATCAACGTGC 3314 28 100.0 32 ............................ CACAGCATAAGGATCTGATTGAGCGTATTGCA 3254 28 100.0 32 ............................ AAACACCTCCCCAACTCTCAGACTCACCGTCT 3194 28 100.0 32 ............................ ACCAGAAAACTAATGCGCCAAGCGTAATGATT 3134 28 100.0 32 ............................ AAAGATGATCAGTTCATCTGTGAAGATGCCAA 3074 28 100.0 32 ............................ AATCAGGTCATCAATCTGTTCAAACTGCCAAT 3014 28 100.0 32 ............................ TACCCCCTGTAAGGCTAACGACATCATATCTA 2954 28 100.0 32 ............................ ACTTAAAACAAATAACGGCACTGAAATGGAGT 2894 28 100.0 32 ............................ TGATTCTGCAATATCATGCTCACCTGCAATTT 2834 28 100.0 32 ............................ TGTCGATGCACTGACTGCATTACTTGAACGAG 2774 28 100.0 32 ............................ ACGTAATAATTCAATATGGCTCATGCTTGGCA 2714 28 100.0 32 ............................ TAACTTGCCTTCCCATTGAGCACCAGCAATAG 2654 28 100.0 32 ............................ TGACCATCGTTCACGCTATAACGCTCAGGCAA 2594 28 100.0 32 ............................ GAGGTGGTATTGTTTGGCGTGGTGAACATTAT 2534 28 100.0 32 ............................ GCAACAAGTCAAAAGAGCATTAATTTTGTTAG 2474 28 100.0 32 ............................ CACATGCACACCTCTATTTACGGTCTAAGCTT 2414 28 100.0 33 ............................ ATCCTTTATTGCTTGAAATTATCATAAGGAAAT 2353 28 100.0 32 ............................ CGAAGATAAACCAAGCAGCCATGAATTTACTC 2293 28 100.0 32 ............................ GCGCTTGATATGACTCAGTATCGAGTCTGAGC 2233 28 100.0 32 ............................ ATTCTTTTGATTGTTCTCTTGTTAGCTGAAAG 2173 28 100.0 32 ............................ GTTCCAACGAGTTTTAATTCCACCCTGATCTA 2113 28 100.0 32 ............................ TGTCTATAGAAATCAATATAATATAACTCAAT 2053 28 100.0 32 ............................ CCGATAAAATCACGACTCAATGGGTCCTGAAA 1993 28 100.0 32 ............................ ACATCAAAAACATTCCGCAGCAAATCGCATGT 1933 28 100.0 32 ............................ ATCAGGGATATGCTTCATCAATTCCAAACAAT 1873 28 100.0 32 ............................ TGTCGCTGTTCTTAATGTGCCACCATTGTCAG 1813 28 100.0 32 ............................ ATCGGCTAAGTGCTCAAAATTCAGAATGATAT 1753 28 100.0 32 ............................ AAGCGGTGCCTGAATGCACATGGACAAAAAAT 1693 28 100.0 32 ............................ ATATTCTAAACCTCTCGAATTCGAAACCTTTA 1633 28 100.0 32 ............................ AAAGGCAAAGCATTACCAACTTAGCTGGAATG 1573 28 100.0 32 ............................ AACAGTACCCTGCACATTGATACTCGTCCAGC 1513 28 100.0 32 ............................ TGCAAGACCAAAAACACCGCCTCTGACCAAAT 1453 28 100.0 32 ............................ ATATTCACCCCTCCGCAATATACCCAATCCGA 1393 28 100.0 32 ............................ TGAATGCCAAACAAGTCATTGATATTCAGCGA 1333 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 72 28 100.0 32 GTTCATGGCGACATACGCCATTTAGAAA # Left flank : TGGAACAACTAAACTTAAACCATTGGCTAGAAAGACTGCAAGATTATGTGCATGTCTTATCTGCTCGTGAAGTTCCAGAAGATAAGATCAATGGCTATGCAACTTACTTTAAAGCCAATCCAAAATTAACGATTGAACAGCGTATTTTGCATCAAGCAAAACGCCGTGGAATTTCAATTGAAGAGGCAAAGGAACACTTTAAAGCATTGGAACTGACGGAGACTTTTGAACCTTATATTAATATGAAAAGCCAAACCAACGATATGAACTTCCGTTTGATTATTGGGAAAAAACGTGTTGATGAAGCATGTATTGGAAAATTTGGAAGCTATGGATTAAGTCGTACATCCACAGTACCAGAGTTTTAACCCAATATTTTTTAGACTCTTTAACAGCTTAATAAAATCAATAAGTTACAACAAGCCATTTTTTGATTGGGTAAATTTATAAAATACATGATAAATGCTTGTTGTAACTTATATTTTTGCTTTATTATAACT # Right flank : ACGGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCATGGCGACATACGCCATTTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGACATACGCCATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCATGGCGACATACGCCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.20,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [3.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //