Array 1 49418-47711 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011523.1 Streptomyces sp. CFMR 7 strain CFMR-7 plasmid unnamed, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =================================================================== ================== 49417 29 100.0 32 ............................. GTGAACTTCCGCTCGCGTGACGGCAGGGCCGA 49356 29 100.0 32 ............................. ACGGCCGACAGCCCTAGGCACACGGCGGCGAG 49295 29 100.0 32 ............................. CGCTGGGAGGCGGCACGGGCGGAGTCCGGGCG 49234 29 100.0 32 ............................. CACCGATGCGCTGGATGCCTTCCACCGGGCGA 49173 29 100.0 32 ............................. TCCCCTCTGGGGAGGGCTCGGTTGGGAGTCGT 49112 29 100.0 32 ............................. CGGCTGTAATGCCCCTGGAACGCCACCGTGAT 49051 29 100.0 32 ............................. GAGTCGTTGTCAGGCCCCGCGCCTTGATCCAA 48990 29 100.0 32 ............................. TGCTATGTGATCAACGGTGCGTGCGTGACGGG 48929 29 100.0 32 ............................. CCGCTGTACCGGCCGGTGTACTTCGAGCGGTA 48868 29 100.0 32 ............................. TGGTCCGGGCCGGTCCCGTACGGGCCCTCAGC 48807 29 100.0 32 ............................. CCCTGGCTCGCCCCTGTCCACAGGCGAGTGCA 48746 29 100.0 32 ............................. TGGGCGTCGGCCTGGCCGGTGAGCGCCCGGAC 48685 29 96.6 32 ............................A CTCCCCCGGTAACAGGTCTTGGGGGTCCGGTC 48624 29 100.0 32 ............................. TACCCGCACCTCTCCCCGTGGGCCACGGACGA 48563 29 100.0 32 ............................. CCTGGCGCTTCGCCCTGACCCTCGTGTCCCTG 48502 29 100.0 32 ............................. GACCGGGACAAGCTCGCCACCCTGGCCCTCGG 48441 29 100.0 32 ............................. CTGGAGGCCCTGCTCCGCCTCCTGCCGATGGC 48380 29 100.0 31 ............................. CCGCCCGCCCCCCGTCCACTGGCAGTTCGGG 48320 29 100.0 32 ............................. TCGCCCGCGCGCACGCCCGCCCAGGTGTCCGC 48259 29 100.0 32 ............................. CGTCCGGCCGCCACGGGCAACGGGTACTCCGA 48198 29 100.0 32 ............................. TTCCAGTCCGGCTCTTCGCCCTTCATAGCTTC 48137 29 100.0 32 ............................. CAGGACGACTTCTTCGACGCCGTGTACGACGC 48076 29 100.0 32 ............................. CGACGCCGTTCGACATCGGCGCGCTCGCCTCG 48015 29 100.0 32 ............................. CAGTACGTGGACCTCAACTATGGGCTGGTGCA 47954 29 100.0 29 ............................. GAACGTAATCGCATGTCTGATGAGGGGGA 47896 29 96.6 67 .........A................... CAGACGAACGGCAAGCCGAACTCGGAGGTGAGCCGCCCAGCTCAACGAGACGGTCAGGCTCCTGATG 47800 29 100.0 32 ............................. CTGGGCAAGACCGGGGCTGACCTGCTGTACGA 47739 29 89.7 0 ................T..G.A....... | ========== ====== ====== ====== ============================= =================================================================== ================== 28 29 99.4 33 GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : CACTGACGTACACCGGATCGGCACGAACCGGCCCGTACAACAGGGGAGCCTGCGCTTGGAAAGGGGGAGAAATCTTCCCGATGTCATGCAAGCCAGCCCAGAACGAAACCACAGAGCGTGCCTCGGCCAAGCCCAGACCGAGCACACCCGCAACAGCCGATCTGGTCCCGCTGCTCACCACCACGTTCCAGAGCTCCTGGAACACGGCACTGGTATCCAGCAGATGGCACACCACCGGGTACGAACGCGACAGCCCGCTCTCCTTCCCCCACAACCGAACATCCAGAACACAACCCCCCGAGACCCCCACCCCGCCGCGCTTCAGCATGCCCACAGAGGTAGCACCCCCCACTGACAACGACCCCGAATCGCCGAAGATGGGCACCGAAACGCAAGCGCGCGCTTACACTCGCTGCGCAACGACGGCGAAACGGAAACCATGCTCGACAACGGTCAGCAAAGAGATGGCAAAGCCGCTCAGTAAGCGCAGGTCGCGAAGG # Right flank : CGTCTAGAGCAGCATGAGACTGTCGGGCTCAGGTGCTCCCCGCGCGAGCGAATTCAAGAAATCGGACTCTTGTTCCAAGTGGCGTCTCTCGGGATTGCCCTACCTGCTGCCATTTCCTTGTGCTTGCATCTTTCTAGGAATCCGCTAGCGCTCGGTCAGCGCCTGTTAGCCGCCCTGGGTGGCACGGAGGATTAGTGCCTGAAGACCAACCAGACTGGACGTTTTGGGGCTTCATCGTCGCTATGCTCCAGATCCTGCTGGAGGTAACGAGGTAGCTTTCAAGAGGCCAAACAAGGATTGCCTGGTTGACGGCAAGCAGGTCGCAGCCTCGCCTGTTGCTGGTTCCTTCTTCGCGCAAGCGGAGGTGAGCCGATGCAGGCACAGGGGCCAGATGGCGTAACGGACCTTCTCCGCGTGAGCGGAGGCGAGCCAGCTGATCGCAGACCACACGCCCACGGCCCCACCCGTCCGGGTGGGGCCTGACTCAGACTCGTTCACAG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 59102-60378 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011523.1 Streptomyces sp. CFMR 7 strain CFMR-7 plasmid unnamed, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================================ ================== 59102 29 100.0 32 ............................. GTGGTGTACGAGGCGGGCACCGTGATGGACAT 59163 29 100.0 32 ............................. CGGGTCGGGCGCTTCTTCGGCGGCTGCGGGGC 59224 29 100.0 32 ............................. TGACACAGCGTTACAGGCCGCTGCCGGAGCCG 59285 29 100.0 60 ............................. TCGTTCGAGGGCCCCCAGAGGTCGGCGGTCGTTCGAGGGCCCCCAGAGGTCGGCGGTGAA 59374 29 100.0 32 ............................. ACCCGGAAGAACCCCTCCCCGAACCTGCGCTT 59435 29 100.0 32 ............................. CCTGCGCCAGGCTTCAGCCGGCTCACCGTAGC 59496 29 100.0 32 ............................. TACCGCCCGGACCTCACGGTCACCGAGACCGA 59557 29 96.6 32 ............................A CCCCCGAGGTCAAGGCCAAGGTCCTCGCCGAC 59618 29 100.0 32 ............................. GTGCCGAAGGTAACGGCCTGCAGATCCGGGTC 59679 29 100.0 32 ............................. TGGCGCGGCCTCGCTCTCGCCGGGCCCGGTGC 59740 29 100.0 32 ............................. ACCCACGAGTTCGCCCGCACCCGCACCGACCT 59801 29 100.0 32 ............................. CCGAGTCCGCTCGGTGAGGGAGGGGAGGGGGC 59862 29 100.0 32 ............................. CATTGCTGCACCTGGGCAGGGAGGTCCACGCC 59923 29 100.0 32 ............................. AGATGGCCCCCGCCTGGCGGGCCATGAAACTC 59984 29 100.0 32 ............................. GACCTGTCCAGCTCCGACTACGGCGAGGAGTC 60045 29 100.0 32 ............................. GCCCGCGCCGAGTGGGGCGCCCCGTACGGCTA 60106 29 100.0 32 ............................. CCCCACATGAACATGCCCCGTCCGATCGCCGA 60167 29 100.0 32 ............................. GCCACCGGCTCGGCGGTCACCGGCGCGGTGGG 60228 29 100.0 32 ............................. CCTACTCGGATGGTTCAGGCCACAGAGCGATT 60289 29 100.0 32 ............................. TCCTCCAACGGCGGCACGTCGAAGAACACCGG 60350 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ============================================================ ================== 21 29 99.8 33 GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : CCGCATCGTCACCGACATCCAGCAACTCCTCGACCCCGACCACACCTACGAAGCCCCCGACCCTGCAGAGCAAATGGTGGACCTCTGGGACCCCGTGGCCGGCTCCGTACCCGCCGGCGTCAACCACGGAAGACAACCGTGACCCTCCCCACGGAAAGAAGACACCGGCCATGTCAGCGATGATTGTCATCTCCGCCACCGCCGTACCCGACCATCTCCGCGGCGCCCTCACCCGCTGGCTCCTCGAAGTCACACCCGAGCTGTACGTCGGCACCGTCTCCGCGAAAGTCCGCGACGAACTCTGGGCAGCCGTCACTGCCTGCACCAACGACGGCCTCGCGGTTCTTGCCCACCCCGCCGACAACGAACAGGGCTTCCAACTCCGCACAGCAGGCACACGCCGACGCGAACCGATCGACTTCGATGGCCTCACTCTGATCGCTTTCCAGCGAGAAGGTCAAGAAATGGCAAAACCCCTCTAACGCCCCAGGTCACGAAGG # Right flank : GCGGGCAATACCTGCCCCGAGGTCAGCCCTAGGTTCTGTCGTCAAATGTCACGCCCACATCAGGAGTGAGGCGAGGGCGACAGCTGCCTCGTAGGACTCGGCGGTCTTTTCGTACCGGGTAGCGATGCCTCGCCACTGTTTCAGGCGGTTAAAGCACCGTTCCACGACGTTGCGGTGCTTGTAGATCTCGCGGTCGAAGGCCGGCGGGCGGCCTCCTCGGCTGCCTCGCCGGGCCCGGTTGCGGACCTGGTCGGCTCGTTCGGGAATCGTGTGCGCGATGCCCCGACGGCGGAGCCAGGTGCGGATCGTCTTCGAGCTGTAGCCCTTGTCGCCCAGGACGTGATCGGGCCGGACCCGGGGCCGCCCCGGTCCGATCCGGGGCACCCTGATCGCCTCCATCACCGCGGTGAACTGGGTGCAGTCGTTGGTGTTGCCGCCCGTCACGACGAAGCCGAGCGGGCGGCCGCGGCCGTCGCAGGCCAGGTGGACTTTGCTGGTCA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [45.0-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 61305-61516 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011523.1 Streptomyces sp. CFMR 7 strain CFMR-7 plasmid unnamed, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 61305 29 100.0 32 ............................. GCCGGAACGCTCAAGGCGTGGCGGGTGGACCT 61366 29 100.0 32 ............................. CGCCAAGGAGCGTCATGACCACCACCCCTGAG 61427 29 100.0 32 ............................. ACCGGGCCGTACCGCTCGGCTGCGAGGTCGGC 61488 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================ ================== 4 29 99.2 32 GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : GTGTTGCCGCCCGTCACGACGAAGCCGAGCGGGCGGCCGCGGCCGTCGCAGGCCAGGTGGACTTTGCTGGTCAGACCGCCTCTGGACCGGCCGAGGGCAGGGTCGCGGAGCCCCTTTTTCGGGCCCCGGCCGCGTGCTGGTGGGCGCGGACGGCCGTGGAGTCGACCGACACCAGCCAGTCGATGTCGCCTGCCGCGTCCGCCTTCGCCTGGGCGGTCCGCAGCATCCTCTCGAACGTCCCGTCCGCTGCCCACCTGCGGAAACGCGTGTGGAGCGTGGCCCACGGACCATAGCGCTCGGGTACGTCCCGCCAGGCCGTCCCGGTCCGGAACTTCCACACGATCCCGTTCAGCACCCGGCGGTCGTCCAGCCGCTTCCGCCCCCGCAACGACTCGGGCAGCAACGGCCGGACGAACTCCCACTCGGCATCCGACAGTTCATGACGACGTATCACGACACCATGATCAACTAACCGTGATCATTTGAAGACACCACCTAAT # Right flank : ACGTTCCCCTCGGCGGGCGGCGGCTCCATCGGCGGGGTCCCCTGTCCTTGGTCGGCCCCGACTCCGCGCTCGGCGTCGGGGCCGGCCTCCTGTTGCAGTCGACCGCCGGTGACCGTACGGCGTGACCGTTGCCCTCGCACCGGCCGATTTCCGCGGTGGTCCTCATCCGGTCCGGGGGAAGGTCGCTGCGGCTCCGGTACTGCCGGAGCCGTAGCGGGCCGTGGCTTTGTCGAGGGCCGTTTCTAGGCGGTGGAGCTTGTCGTCGCGGTCGTCGAGGGTGAGCTGGTGGACGGTGTCCTCGGCGGGCCGGAGGCGTTCTGCGCGCAGGGCGATGGTGCGGACGCGGGCGCGCTGGAGGCCGAGGCCGGTGAGGAGCTGGCGGGCGGTGGCGGCGAGCGCGGGGGTGTGGGCGGTGGGTTCGTTTAGGGGCCGGGTGCGGGTGGTCTGGGTGCGGTCGGCGTAGGTGACGGTGAGGGTGAGCGCCTGGGCGATCTCGCCTT # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 2061807-2060737 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011522.1 Streptomyces sp. CFMR 7 strain CFMR-7 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ============================= ================== 2061806 33 90.9 28 .............................G.CG GGCAGAAGCGGGCCCACGCCGCGTGCGT 2061745 33 97.0 28 ...............................A. CTCGTGCTGCGCTACCGGATCATCACCG 2061684 33 93.9 28 ...............................CG AACGCCACTACCCGACCATGCCCACCAG 2061623 33 97.0 27 .............................T... CCGGATCGCCGCCCGGCCCCGCACCCC G [2061595] 2061562 33 90.9 28 .............................T.CG CGTCCAAGCACGCCCGCACCCTCGGCAC 2061501 33 93.9 28 .............................G.A. CATGCGCGCCGAACCCGGTGACTGGATC 2061440 33 90.9 28 .............................GT.A GCTTGCGTACCGGCCCCCGCTTCTCGAT 2061379 33 90.9 28 ..............................TCG TCCAGGCCGCCGGGAAGACGGACATCAA 2061318 33 87.9 28 .............................ATCA AGACCAGCGAGGGCCAGTACATCTGGCA 2061257 33 90.9 28 ..............................TTG CGGTACTGCACGCCTTGGCCGCCGAGGT 2061196 33 90.9 28 .............................GA.G GGGCGCCCGCGGCTTCGTAGAGGTACTC 2061135 33 93.9 28 .............................G..G TGCTCGGCGGGCGCTTGGAGGCGCGGTC 2061074 33 100.0 28 ................................. CGGGACCGTCCGCAAGCTCCCCACCGAC 2061013 33 90.9 28 .............................G.TG GGAACTCCAACTCTCCGCCGGCAGCATC 2060952 33 100.0 28 ................................. CTTCGGCGGTCGCGCGAGCGCGAGCCTG 2060891 33 90.9 28 .............................GG.G CCGGTGACCCCGGGCACCCGCCGCTCCC 2060830 33 90.9 29 ..............................ACT CGGTCGCCATGCAGGGCATCGGCGACAAG 2060768 32 78.8 0 ..T-....T..................ACAG.. | ========== ====== ====== ====== ================================= ============================= ================== 18 33 92.3 28 GTCCTCCCCGCCGACGCGGGGGTGTTCCGCCGC # Left flank : CCGGGACGTCCAGAGCCTCCTGACGCCACGCTCTACGGGCACCATCGGCGGAGCGGGGGACGAAGACGAACGACAGGAGAAGCGCGACGTCCAGCTGGTCCACCTCTGGGACCCCAAGGCCGGAGCCCTTCCTGCCGGCGTCAACTACGCGGCCCGAGGTGAATGATGCCGTCCATGCTCGTGATAGCCACCACGGCCGTGCCTGACCACCTCCGCGGAGCACTCAGCCGCTGGACCAGCGAGGTCGTCCCCGGCATCTTCGTCGGGAGCGTCTCCGCCCGGGTCCGCGACCAGCTCTGGCAAGCCGTCACTGACACTGTCGGCAACGGCGCCGCCGTCCTCGTCCACCCCGCCCCCACCGAACAGGGCTACGCCATCCGAACCGCTGGCACCCGTCGCCGCGTCCCCGCCGACTTCGACGGGCTCACCCTGATCCGAATGACCGCTTCACCAAAGGTAAAGGGAATGCAAAGCCCTTCTTAAGGTGCAGGTCAGCAAGT # Right flank : TCTGCACCCCCAACAGGTTGGTCTTCGCAGCTGGTGCAGCAGGCCAGGCGCTTAGAAGAAGCCCAATCCATTGTCGGCCGATGGGTCCTGACCTGCGCATTTTCAAACTACTGACGGGCCGTCATGAGTTTTGTGGGACGTATGTGGGATCTGCCGATTTCTGGGAACCGTGGGAAGCGCGTGCTCCCTGGTGGTTCGTAGGTAGCCTCTCACGCCACCTTCACACGACCGAAGCCTCTGGTGGAAATAGCTGACCCCTTCTCGGTGTTTGTGATCTACGAGCCGAGGAGGGGAGGTGTCGGGTCTGAAACTGTTTCACACGATGAATGGCGGCGTGACTGAAGTCACGCCGCGTCTTGCTGCCGTCGAGGCGGATGTGCAGAGCCTGATCGAGGCGCACATGGAGACGATGCTGGGGGTGCGGTTGCTGGAGAGCGAGTACGTGATCGACTGCGTTGATGGCGGGCGGATCGACTCGCTCGGGATTGACGAGAACGGTG # Questionable array : NO Score: 5.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.61, 5:0, 6:0.25, 7:0.00, 8:1, 9:0.18, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGTTCCGCCGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.20,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2071704-2073078 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011522.1 Streptomyces sp. CFMR 7 strain CFMR-7 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ============================= ================== 2071704 33 97.0 28 .............................C... CGAGGCGGATGCACGTCCTGGCGGACGA 2071765 33 87.9 28 .............................CTCC TGGAGGCGAAGGGCTGCTTCGTCCGCGC 2071826 33 90.9 28 .............................CT.A CCGAGGAGTCCGGGGAGGTGGCGCAGGC 2071887 33 90.9 28 .............................GA.C GCCTGGCCGAGATGCAGGAGGAGCGGGA 2071948 33 90.9 28 .............................G.CC GCACGGAGATCCGTGCGGGCCTAGACGG 2072009 33 93.9 28 ..............................T.T TCCGGGCTGCGGTCGCCCGGCTGCGGAA 2072070 33 90.9 28 .............................TT.A GTCCTCGGATCAGGGTGGAGGTTCCGCC 2072131 33 93.9 28 .............................CG.. CAGGTCGTCAGTCGCCAGGGCGCCGGCG 2072192 33 100.0 28 ................................. ACGGCGACCCAAGCGGCATGAAGCTCGA 2072253 33 93.9 28 .............................C.C. CCACGGAATCGTCCGAGTGCCGGTCCAG 2072314 33 93.9 28 .............................CT.. CGATGGCCGGTACGGGGATCGGGCTGCT 2072375 33 93.9 27 ...............................CT CGGGAAGGTTGTGCTCTTCTTGGAGCC T [2072404] 2072436 33 90.9 28 .............................GG.T AGTCCAACTCCTCCTCGTCGTCGTCTTC 2072497 33 100.0 28 ................................. TGACGAGGGTGTCGAAGATGGGCGTCAC 2072558 33 87.9 28 .............................TTAT GCCCGGCGTTCGGGTCGGGGATCAGCTT 2072619 33 97.0 25 .............................C... CCCCGGCCGCCCCGGCGTTGGCCAG TAC [2072648] 2072680 33 93.9 28 ..............................T.T GCTCGGGGATGGTGATGTCAGCCATGGC 2072741 33 90.9 28 .............................T.CA GGCAGCCGTCCGGACCGGCCGCACGCGC 2072802 33 93.9 27 .......................A.....C... TCCATCAGGCCCGGCCCGACCCAGGGG 2072862 33 90.9 29 ..............................TCC ACGTGGTGGAGCAGGCCGACCTGGACGGC 2072924 33 93.9 28 .............................CA.. ACGGCCGCCACACCCCCAACCTCTGGCC 2072985 33 90.9 28 .............................GA.A GACGTGACTGCACAACCTGATCACGAGG 2073046 33 90.9 0 .............................CT.C | ========== ====== ====== ====== ================================= ============================= ================== 23 33 93.0 28 GTCCTCCCCGCCGACGCGGGGGTGTTCCGACGG # Left flank : AGGCCAGCACACAGGCCGACGAGCGCCCGAGCGCGATCCGGTTCCCCTGCCAACCCCATCCCGTCGGCTATGCGCGCCCTCTGATTCTCCGCCAGGTAAACGTCCCACAAGTGGAGTGCCATTGCTGCCGCGTCGAGAAGATGCCTCACCAACGGGTAGGGAGGCAACGCCGGATCCAGCCCCCGGGACTTTCCCCACACCGACTCATCCACCACGTTCGGCCTATGCACGCCAGCCCTCTCCGCTCCACCACTCGAACTTGATCTGGCAACAGAAGCGAAACCGCCACCCATCGCATACAAGCACCCGGCACTGACATTGATGTCGCTACTTGCGTACCGACGGCCGTTCCTCGATCAGTAACGGGGCGCGGTCCACGCCTTGGCGACCTTGCAAGCTGCAGCTGGCTAGAGTGGCGGCATGCGTCTGACTGGTCGCCTCACCCCCTCAAGAATGGCAAAGAAAATGCAAAGCCCTTCTTAAGGCGCAGGTCAGGAAGT # Right flank : CGCGGGAGGCAGTCATCCCAGTCCTTGCCGTTGTTCCCGCCGCCACGGCGCCAAGCCTGTCCCGGAGCGACCCGCCAGCTCGCCGCCGCCACAGGCCGACGGTCAGGGGTGCACTCCGTACCGACCAAGATCCGGGCCATACTCGGACCAGCCGCCTACAGCTTGGCCGCATAGTGGCCGTTCCCGCTGGTCAGGGACCACGGGAGGCGTGTACCACCAGCAGACGAAGAACCTGCTGGAACTCTACGCAGGTGTTCGCCTGCCCGTACTGCCGTACAGAGCCGAAAGGCACCCGTCAGCGTTGGGAGTCCCCTGGGACATTTCTGGGACTTCCGGCCCCATCAAGCGACACGAGCGTGAAACAGCCGAAAGGCCAATCGCGCAGCTCAGTGACCACACGCCACTCATCGCGGCAGGTCACCGCGTTCGCTGGTCTCTTCCGGGACATCTGATCTGCACGATCCGGCGGGCCCCGCATTGAGCGTCACCAGCCCTCGGCG # Questionable array : NO Score: 5.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:-0.01, 8:1, 9:0.14, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGTTCCGACGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 3648313-3649110 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011522.1 Streptomyces sp. CFMR 7 strain CFMR-7 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3648313 29 93.1 32 .............AC.............. GGGATGCCGGCGGCTTCGGCGAGTTCCCTGAA 3648374 29 93.1 32 .............AC.............. TTCCCCGTGCACGGCGTCTCACCCTGCGGCCC 3648435 29 89.7 32 .............AC.....A........ CCGTGGACATGCTTCGCGGTGGGGTTGGTGTC 3648496 29 93.1 32 .............AC.............. CCCGGCCCGAACGCCACCACCACCCCGGGCCC 3648557 29 89.7 32 .............AC.............G CCAATCCCTACACAGCCCCTGCATCACGATGC 3648618 29 75.9 8 .............AC....A...AAG..G GTCCAGGG C [3648638] Deletion [3648655] 3648656 29 100.0 32 ............................. GCGAGGACTCCCGCAACTGGGGCTACGACCAC 3648717 29 100.0 32 ............................. TCGGCCGGGACTACCTGCCGAGCCGCCGCATC 3648778 29 96.6 32 ....C........................ GGGGATGTACCTGTGAACCGCCACGCTGAGCC 3648839 29 100.0 32 ............................. GAGTACGCCAAGATCATCGCCGCTGAACTGAC 3648900 29 100.0 32 ............................. CGACCTCCACTACAAGGTCCTTGGCCCGAGTG 3648961 29 96.6 32 ..............C.............. GGGTCGTAGCCGACGCGGACGGTCTTGTCCGG 3649022 29 93.1 32 .............A..........A.... AGTGGCCAGCTGACCGTAGTCGAGGCCTGTTC 3649083 28 69.0 0 ...........C.AC..C...C.-A..GG | ========== ====== ====== ====== ============================= ================================ ================== 14 29 92.1 30 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : CCAGAGGAGGAGATCGCCATCAAACTTGCCGGATTGCCCGGCTGGGCGCGGGAAGGGGACGCGATCACCCGTGCGTTCGGGATCCGCTACCACGGCGGCGTCGCGATGATCGTGAACGTCGCAGACGTCGAGCGACTCATCGGTCACCACGCGGACATCGACCTGCGCTGGGACCACGTGAGGTTCCGCATCACGACACACGACGCCGGACACCGCCTCACCACCGCCGACTTCGACCTGGCCGCCCGGATCGACCGCATCGCGACGGCGCACGAAGCGCAGGCTCACAACTCCTGATCAGGACGCCCGGGTTGTTCCCACGGTGTTCGGTGAACGGCCTTTCGGCGGTGATGATGAGGCACTGTGGGCGTGCGGCCGAGGAAGGTGCCCCGTTCGCTGCGTTCACTCTTGGACCACCTACAGCAAGGGGAGATATGTCCGTTTCTCTGGAAGTAAGCAAAAACAGCCCCTCGGCGATATAAACCTGCAGGTCACGAACT # Right flank : GCCCACCAGCCCCCTCACACCCCCAACTCCCCCCGCGAATCCGCAACCGCCTCCGGATACGCGGCCAGCAGCCGACGGGCCACCGGCAGTGGCATCCGCACCACCACCGGCTGCGGCAGCGTCAGTTCGCGTTCCGCCACTGCCGTGCGGGAGGAGCGCACTCGGTCCGTCACCCGTGCCACCACCCGTACGTCCAGGGTGAATTGAACCAGCACGGACGCGAACTTCGGTTTGTGCAGGGGCATCGAGCCCGCGCCGCTCGCCGATGCGCCCGTGGCGGAGCCCGAGCCGCCCCCGTTGGCCATCAGCTGGTTCAGGCGGAACTCGTCGGCGTTCAGGACCCCGGCGCCCAGGAGGCCTCGGGCCTGGCGGCTCTTCTCGGCTGCGCTCTGGGCGTCGGTCTGGGTGGGGCGGAGGGCGGTCAGGTCGCTCTGGGCGACGGTTTCGAACGTCATCTTGTCTCCCGCCCCGAGGATCCGGCCCGCTCTCAACCGTGCGTG # Questionable array : NO Score: 5.27 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:-0.17, 8:1, 9:0.49, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.78 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 3813333-3814214 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011522.1 Streptomyces sp. CFMR 7 strain CFMR-7 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3813333 29 100.0 32 ............................. AGGCCCGGGGGGCGCAGCGAAGCGCAGAGGGC 3813394 29 100.0 32 ............................. ATCGCCAAGTCGAAGCCCGAGATCCTCGACCG 3813455 29 100.0 32 ............................. CTGGCCCCGGCTGCCCGGTTGCAGGTCCGCCC 3813516 29 100.0 32 ............................. GGCTCGGAACGCGAGGACCAGGTCCAGGCCGT 3813577 29 100.0 32 ............................. GTCCTGTTCCAGTTCAACCGGCCGGACAGCAA 3813638 29 100.0 32 ............................. TGGCACCGGTCGGTGCTGTGCCAGCTGCTCGG 3813699 29 100.0 32 ............................. CGCCGGGGTGGGTGCTCTGGCCGAAACACAGC 3813760 29 100.0 32 ............................. GTCGTCACGGTGAGGACGGAGACGGCGCGCTG 3813821 29 100.0 32 ............................. CCGGACGGGCATCGCAGAAGCTTTCGACCGTG 3813882 29 100.0 32 ............................. GCCGCGTCCAGACCGGGCGCGTCGATGACGTA 3813943 29 96.6 32 .................A........... GAGGCATTCGGGGGCCGGGACGCGGAGGCCTT 3814004 29 100.0 32 ............................. ACCGCGAGCTTCTCCTCCAACCGCACGGTGTC 3814065 29 100.0 32 ............................. ACCGCGAGCTTCTCCTCCAACCGCACGGTGTC 3814126 29 100.0 32 ............................. TGGAGAAGGCCCGTAAAAGCGCCACGCGGTCG 3814187 28 86.2 0 .................C....-..A..T | ========== ====== ====== ====== ============================= ================================ ================== 15 29 98.9 32 ATGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : CGGACGCCGTACGCGAAGGGATTCTCCGGTGGCTGACCGGAGCGACCAGGAACGAGCTGACCTCCCAAGACCGCCCACCGCTTCCCACGGCGGAGGAGCTGGCCACCGGGGTGCACGTACGCCCGGAGGCGGGCCCGGGGCTCATCGCCCTACGAGCAGTGCTCCGACACTCCCGGCTGCACCCCGTCGACTCGCTACCCATAGCCCACCTGGGAGCGGGGTGGCAGGCCGCCGACAAGGGGCTGAGGCGGAGGTGGGGGTGGGGTGGCGGCTCTGGTGAAGGGGGTTGAGGTGCGGGCGGTGGTACGTCGAGCTTGCGGCTGCGGTAGCGGGGGCGCGGCCCGAGGCTCATCCGGCGGGGTGGACAGCGTGCTCACGACCGGAACAATGGGGACTCGGCTCGCACCTCGGGCCGCCGATGAAGCGAGGTCGATATGTCCGTTTCCCGGGAAGTGATGGAAAACAGCACCTCGGCCGCATAAACCCGCAGGTCAGGAACT # Right flank : TCGGCGGAGCCGACGAACGCCCCCATGCGCTCGTTCCCCAGGGCGTGCGCACCCTCCGAGGCACCGCGAAGGACGGCCGGCGGAGGATGCGCAGCCCCGGGTCTGGCGGCGGCAGCCGGCGCTCGGTGCAGGCGCTCAGTGGCCGTACGCCCCGCACAGGCCCCGGCCGACACCTTCCGCCGCTACGGTCCCGCAGCGTCACGGAGGTCACGCTCGCGCCGCATACTCCGCGAGGGCGAGCGCGCAGTGAACGGTACGGCCGTCCTCGCTGACTCCCCACGCGTCGGCCAGCGCCTCCACGATGCCCAGTCCTCGACCGCCCTCCGAGGTCTCGTCCACGGCCCGGAGCACAGGACGCACGGGAGAGCTGTCCTCCACCCGCATCGTCAGATGCGTGACGTCAGCACACCAGGTGACGGTGATGTCCTCTCCGCCTCCGTGCTGGAAGGCGTTCGTCACCAGCTCCGTGAGGACGAGCGCGGCCACGTCGATGCAGGGTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched ATGGTCCCCGCGCATGCGGGGGTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 5 3973317-3973710 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011522.1 Streptomyces sp. CFMR 7 strain CFMR-7 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3973317 29 100.0 32 ............................. CAGGTGGTCGTCGACCTGCTCGGGGACACCAT 3973378 29 100.0 32 ............................. AGCTCGGGTGGTCAGGGTCAGGGGCGTGAGGC 3973439 29 100.0 32 ............................. TTGCTCCGCTTCAGCGGCCGTCCCCGGCCCCG 3973500 29 100.0 32 ............................. TTCGGGGCCGGTGCGTCGGCCGGGACCGCGAA 3973561 29 100.0 32 ............................. ACCGAGATCCGCGACCAGTTCAACTCGATGTT 3973622 29 100.0 32 ............................. CGCGATGCGGAGCTGTCCGCGGCGGCCGGGGT 3973683 28 89.7 0 .....................G.-A.... | ========== ====== ====== ====== ============================= ================================ ================== 7 29 98.5 32 GTGGTCCCCGCGCACGCGGGGATGTTCCC # Left flank : CCCGGCGGCCATCGACTCCCCCGTGGGCTTCCTCCGCCACCGCCTGACGACCAAGGCCCCGCCCCAACTCCCCACCGACAGCACCGCTTCCGCCACCACTACCCCCGCCGGCCGCGTCCTGGTCGAATGCACGGAGTGCGGCACCCCAGGACCCCCCGAAGCCCTCCCCGACGGCCTCTGCCGCCCCTGCCGCGAATCCCACAGCAACGAGACCGGGAACTTTCCGATCGCCCCCACCGCAGCACCGGACATCAAGGCCCGCATGGCCAACCTCCGCAACCTCCTCAAACCCGTCTGAGGCGGGCGACGGCGGATCAGCATCGATCGGGCGGCCTCTTATCTGGGGAACGAGCCGTCAGCCTCGGCAAACAGGGGCAGAATCTCCCCAGGTAGGCCCAGAGTGCGGAAACGGCCGCCTGCACAGCGAGGGAGATATGTCCGTTTCTCAAGAAGTAAGCAAAAACGAGCCCCACGCCGCATAAAACCGCAGGTCACGAACT # Right flank : CTCTTAACCTCCGTCAGCAGCTAGGCGAGGCGGCCGCCGTAACGGTGCCAGGCGTAGTACATCCCGCGAGGGGCGGACGAGGACCCCTCCGCGTCTTGTCCGGGCAGTCCGCGAGGCCCGCTGAGTCCGGGCTACAGCGCCTCGCCGGGAATCGACAGATAGGCCTCGCGGAGGCGGTCCAGCAGCGGGTGTTCGGCGGCGAACTCGGTGCCGTCGATGGCCGCCAGGGGGCGGACGCCGATGCCTGCGTTCGTCGCGAAGGCGGCCGCCATCACGCGGGCGTCCTCCAACGTCAGGTCCGCGTCGCGGTGTTGGGCGGACTGTGGCGCGTGCTCGCGCAGCAGGGCCGTCGTCACGCCGGGCAGTACGCCGGATCGCGGCCACAGCACGGTGCCGTCCCGGTCGATGAAGCCGACGTTCCAGGTGGCGCCCTCGGTCACGTACCCGTCGCGGCCGACGAACAGGGCGTCGTCGTAACCGGCGAGCTGCGCCGCGCGCCG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGATGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGATGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 6 5072301-5072632 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011522.1 Streptomyces sp. CFMR 7 strain CFMR-7 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5072301 29 100.0 32 ............................. CACCCCCTCCGATCCGGGCCCCGGGGGGAGCA 5072362 29 100.0 32 ............................. CGGTTCGGGTGCCCGGGCGGCCTGAACGGCCT 5072423 29 100.0 32 ............................. CATGTCGGGCAGTTCCCGGGAGACGGCAGACA 5072484 29 100.0 32 ............................. GTGAAGACGGTGCGAAAGCCGAGCCTGGCCCA 5072545 29 93.1 32 .....................G...T... TGGGCACCGATCTCCTGAACGGTCCCCCTTCC 5072606 27 82.8 0 ............--........C.C.A.. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 96.0 32 GTGGTCCCCGCGCACGCGGGGATGGCCCC # Left flank : CACCGCCCTCACCGCAGGCCTCCCCGCCGAGATCAACTCCCCCATCGGCTTCCTCCGCCGCCGCCTGACGACCAAGCTCCCCCCGAACCTGCCCCCGGCGACCACCACTCGCCCCACCCCGGCCGCTCCCGCCGCCCGCGTCCTGGTCGAGTGCACGGAATGCGGCACCCCGGGCCCCTCCGAGGCCCTTCCCGACGGTCTCTGCCGCCCCTGCCGCGAAACCTGCGCCACCGGGCCCGGCGACCCGTCACCCGTCCTGCCCGCACCACCGGACATCAAGACCCACATGGCCAACCTCCGCAACCTCCTCAAGCCCGTCTGAACCGGACGGCACCCTATTCAGGGGAACGGGCATCGGCCTTGGCGACCCAGGGGCAGAATCGCCTCTGGCAAGGAGAGCAGCCGACCCAACGACGATCAACACGGTGGGGGATATGTCCGTTTGTCAAGAAGTGAGTAAAAACAGCACCCTGGCCGGATAAACCCGCAGGTCACGAACT # Right flank : CTCAACGGAGCTGGGCTCCTGGCGGTCGCGGTTCTCGCGGCGGTGGTGGCCGTTGCACGTTGCCCGGCCGATCATGACGGTCTGGGGAGCCGGGACCGTACTGTCTGACCACCAGCCGTCACGGCACGGATACGGCGCTCGTATCATCCCGCCATGATCATGCTATCTGTCGACCCTGCCTCGCGGAGCTACGCCGACGGCCAGGCCGTGGGGCAGCTTCTGACTCTCGCCGTTGCTCTGGTCCTTGTCTGGGTCGTCACCCGGACCTGGCGGCGAGGTCCGGCCCCGGACGGTCCGGACGACGTGGAGAGAACCACTGCCATCGCCGTACGGCGTGGCAACATCGTCCGCGGAGTACTGCTGGCCATAGCCGCCGCCGGGCTGATAGGGATTTTCACCGGCAGGGGATACCAACCTGCCGCAGAGGCGGCCCCCACCGCCCCAAAGCCTGTCGCCCAGTCGCCCTCCGCCACGACGGGGCCTGCGGAGATCAAGCGCGT # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGATGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGATGGCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 7 5859192-5858981 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011522.1 Streptomyces sp. CFMR 7 strain CFMR-7 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5859191 29 100.0 32 ............................. CATCGTGCGCTCCGTCTCTCCCTGCCTTCCCG 5859130 29 100.0 32 ............................. CCGGTCAGGCCCTGGCCAACGACCTTTTCGGC 5859069 29 89.7 32 A.......T..A................. GCCTCACCCCTGCGTTTCCATTGGAAACGGCT 5859008 28 93.1 0 ....-............A........... | ========== ====== ====== ====== ============================= ================================ ================== 4 29 95.7 32 GTGGTCCCCGCGCGAGCGGGGGTGTTCCG # Left flank : ACCGAAGGGCGTCTTCGCCCGCGCCTTGCACATGGCGGACCTCTTCGCGGACTCGAAGCAGGACTTCCCAAGGGCCGCCAGGATCATCGACCGGGTACTGAACCTGAAGGACGAACAGCCGACTCCGGTGCAGCGGTTGCAGCTGCTGGTGTTGCGCGGGGACCTCGCGCAACGGCTGGGGGACGGGGAGGGGGCACGGGGGTGGCTGGAGACGGCAGAAGCGGTTCAACTCACCGCCGAGGAGGAGACCTTGGCCCGCGATGCGCTGGCTCGGCTGGAGGAGCTACGGGGGTGATGGAGCAACCGGTCGGCCGCTGAGGGCTGCCCCTCCAGGCTCGGCGGGCACACCCCCCTCCCGACTCTCCGCCGAATCACCCGCCATGTGGACGGCTCTCGAACCAACTGCGCCCGGCCGCTCCTTCTGTGATCATGTAGAGGTGAGCACGCAGCCCAAGGGTCAAGAACTGGCAAAGCCCCTATAAACCAGCAGGTCAGAAAGT # Right flank : AACATCGCCGGCAGCTATGACGGTCATCGGGGCCACCCCGGAGGTGCCCCGGTGCGGGGGTGGGCACGCATGATGCTGCCTCCGTTCTCATGGATGGGTGGTGACCCGTCCGGCCGCGGTCCTTGCACGGGTTGCGCGGCCGGGCGGGAGTCTGCAAGAGGCGGCCCCGGGCCCGCCGTGGCCCGGGGCCGGGGGTCAGGAGACCGCGTACGGGCGGGGCGGGCCGCCCCGCCGACGCTCCCTGTCCGTGCACGCCGCGCAGAGGAACTCCCAGGCCGCCCCCGTGAACCGGGCCGCGACGGCTGGGGGCCGACGGCAGAACTGGCAGGCAAGATCAGAGTCCGGCACGTCCAGCATGATGATCACCGGCGTTCCTGCGGGTAGGACACCGGATGCGCACGGGCGATCTCGCAGCCGCCGCGGTGGACGACGGCCGTGCCACCGCCGCCGGATGCCCCGTCGATCGGGAAGCGCTCGGCCTGCCCGGGCGTGATGGGCCG # Questionable array : NO Score: 5.65 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGAGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGAGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.90,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //