Array 1 50921-52353 **** Predicted by CRISPRDetect 2.4 *** >NZ_VTZZ01000021.1 Vibrio cholerae strain M1517 contig00021, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 50921 28 100.0 33 ............................ CGAAGAGCCAGTATGGGAAGAGGGAATTTACCA 50982 28 100.0 33 ............................ CACGATGTGCTCAGCCGGGTAAGGAGGGCAGAA 51043 28 100.0 33 ............................ CACAATGGACAACCTTGCTTTGTTCAATCCATC 51104 28 100.0 33 ............................ TGATTGTAACTCCTTGCTTCCCTCCATCGTGAT 51165 28 100.0 33 ............................ TCGTTCACCACAGCTTCGCAGGGATTCACTCTT 51226 28 100.0 33 ............................ TTGGTCAAGGTGGAAGTACTCGGTGATGAAGTG 51287 28 100.0 33 ............................ CAGTAACGACGCCATGAAGTTGCGCGCCATGAA 51348 28 100.0 33 ............................ CCCGACTCAACACCGGATAAGTCAACGTCATCA 51409 28 100.0 33 ............................ CATAAAGAACCGTTGTAGATTCAGAGTGCCAAA 51470 28 100.0 33 ............................ CAAGGCACAAAGCATCGCGCTTGGCTTGAAATT 51531 28 100.0 33 ............................ TAACAATTCGCCGTTTTTACCCCAGTTTGAGAT 51592 28 100.0 33 ............................ CGTTAGGTTCTGCGATCACTAAATTGATAGTTT 51653 28 100.0 33 ............................ TATTAAAGTAATACAAGCGTTAATTTCTAATAC 51714 28 100.0 34 ............................ CCCGCTATTTTGGGACGCTCTTCATGACCGATGA 51776 28 100.0 33 ............................ CTCAAAGCTCTCTGATTTGGTTCAATCCACGCT 51837 28 100.0 33 ............................ TATCGCCACCATTGTTTTAGTGAGTGGTATGCG 51898 28 100.0 33 ............................ TGCTAGAGCACGTCGAAGATGCCATCGAAATCA 51959 28 100.0 33 ............................ TGTAGATTTTTCAGCCTTAAAAGTCCAAGCATC 52020 28 100.0 33 ............................ CGATTGCAGCCAGTGTTAGTCAGCCAAGTCACG 52081 28 100.0 33 ............................ CGACTCGACATCTTCAAAGCGTTTACGGTTGGG 52142 28 100.0 33 ............................ TAAGAGCAAGTCGAGCTCTGATGATGACGTTAC 52203 28 100.0 33 ............................ CAGAGAGTATTGACGAGCAAGGTCAGCCACTTC 52264 28 100.0 33 ............................ CTCTTTAATCGAATTCCATAACGGTGACGTTAA T [52285] 52326 28 71.4 0 .................T..AT.ACAGA | ========== ====== ====== ====== ============================ ================================== ================== 24 28 98.8 33 GTCTTCCCCACGCAGGTGGGGGTGTTTC # Left flank : CTTTACAAAGAACACCTTTGTATTGATTTAGCTTTCTCACTTACACGAGATATGGCAGGTCACTATGACAAACACAAGGTCTCTGATGCGTTTCGAAAACGGGTTATCAGCATGGATCTGTTACAACAAGTCTCCTCGGATATCAATGAGTTGATGGGAGGGGGAAATGCTCGTCGTACTAGCAAATGATTTACCCCCGGCAGTCAGAGGGCGTATGAAGCTATGGTTTGTTGAACCCAGAGCCAATGTGTTTGTTTCTGGCGTAAAAGATTCCGTTGCAGTGACGGTTGTCGACTACTTAATGCAGCATTGCCCAGCAGAATCGGGCTTGATGTTATTTCGCAGTATTCCAGATCCCCCTGGTTATGAGATTCGTTACAAAGGTGAAGTGCGCAAACCCGTGATTCAGCTCTCTGGATTACAGTTGATTGTCGAAACCCTTATTTTGTCAAAATAGCAATATATGGGTTTATTACTGTGCTCTTTAACAATATATTGGT # Right flank : AGTTTTATATAGGCTTAATCTTTGAGTTATCAGTGAGCCGGATATGGAAATGACGGATAAGTTAGGAAAGTTATTGCGAATTAAATGTTGAATTTACTGAATAGAGGGGCGATATGATGATTCTACTACAGGGTTATTTGCTTGGGGCTGCGCTGGTGGCGTGCGGCTTGCTGTGGGTGATGGTCAGGCACTTGGATAAGCATGATTGGCAGTGGGACAAAGGCGACATCTGGTTTCATTTTGTGTTTATGGTGTTGTTCTGGCCTTTAATGCTGCTGTTTGGTTGGGTAAAACAGGGCAGGCCTAATTGGGCTGATTGGCTGAAACCTACGGCTAATCGTGCCGATTATTACCGAGAAATGGAACGTGCCTATCGAGAACTGAAAACCTGTGGCGCTTATGTTAGCTATAAACCTAAACCAGAGGGGATTTGTGACAACAGCTACGGTGAGTTTATTTTTCCTAGCGCTTTGCTTGAGAAGCAGTTAATTGAGCGACTG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCAGGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.40,-10.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //