Array 1 56-1482 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCHJ010000194.1 Caldibacillus sp. 210928-DFI.2.22 POLOIIEG_194, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 56 36 100.0 39 .................................... GTTCAAAAACTAGCCAAACGTTACTACCTTGATGAAGAT 131 36 100.0 36 .................................... CGATGGCCTCAACGTCCCTGCGATATTCGCCTTGCT 203 36 100.0 36 .................................... TCATTCTTAACACCTTTTCCATCCAATGGATTGAAA 275 36 100.0 37 .................................... TTGGTCTAATATATGCTACTAGGTCACTTATGGGTGG 348 36 100.0 36 .................................... AACAAAAAACAATTGATGAAGTATTTCAGCATGCAA 420 36 100.0 37 .................................... GTTCCCCTCAAAGTGAGTCACCCGATTATGGTTCGGA 493 36 100.0 37 .................................... CTTGTACTAGGCCCGGAACAAGAGGACGGTAAAAGAC 566 36 100.0 39 .................................... CATCCTGTAAGTCCTTTGTTTTTTGCCTTAAGTCCGCCT 641 36 100.0 39 .................................... AGCAAAGGAAGCACGAATATATAATAAACTTCTTCGAGA 716 36 100.0 38 .................................... AGCTTCTTGTTCTATCGTACTAAAAGTAGGGATGGTAC 790 36 100.0 37 .................................... TTAAAGCGATAGCAAAGTATTCGCTAACCTTTCCTCC 863 36 100.0 36 .................................... CTAGCAAAGGCTTACGCCAAGTATTTAAAAGAGCAA 935 36 100.0 35 .................................... TAGTCACTATGTATATTATATGATTGATATTCGCA 1006 36 100.0 40 .................................... TGTCCTGCATTTTCTTCGCGCCTCCTTTTTCAAAGTCTAC 1082 36 100.0 38 .................................... CACTAAAGCAGAAACACTATCTGGAATTGAAAAATTTA 1156 36 100.0 37 .................................... TGAGAAACACGAGTATTTAATCTAACAGGTTTACTCA 1229 36 100.0 37 .................................... CATTAGACAATTGCATATTACCTGAACAAAATACAAC 1302 36 100.0 36 .................................... TGAGCATTATGATGAAAATGAAAGCTGGCATGATAT 1374 36 100.0 37 .................................... TAATCACCCTTCATTGTTTTTTTTTATGGTGTTTATT 1447 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 20 36 100.0 37 GTCCAAGAAAAAAGAAATGATATGAGGCATTAGCAC # Left flank : GATATGAGGCATTAGCACGATAAATATACGTTCATAGACGAAAAAAGTTTCACTTG # Right flank : TAATCACCCTTCATTGTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCAAGAAAAAAGAAATGATATGAGGCATTAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 20-556 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCHJ010000219.1 Caldibacillus sp. 210928-DFI.2.22 POLOIIEG_219, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 20 36 100.0 36 .................................... GGCGTAAGTATGGGTGCTATTGCAGCTCCAGTATTA 92 36 100.0 37 .................................... TTTAAAATGCGATAGTGATAAAAAATTGTCGAATCTG 165 36 100.0 38 .................................... CTTTAATAACTCGTTTGTGACCACCTAGATCACCCCTC 239 36 100.0 38 .................................... AAACCCGCAAAAAATAAGCTGTTGACGAGTCTAGTTAG 313 36 97.2 39 ......................C............. TTGTCAATCCTCGAAAATGCCGGGCGGACGGGCTTGCCA 388 36 94.4 35 ....................A.C............. CCACCACCGACGGCGTCCACGCCAATTGCCTGCTT 459 36 97.2 26 ......................C............. AACAATATAAACGACTACTTTACCGT Deletion [521] 521 36 97.2 0 ..T................................. | ========== ====== ====== ====== ==================================== ======================================= ================== 8 36 98.3 36 GTCCAAGAAAAAAGAAATGATATGAGGCATTAGCAC # Left flank : TTTTTTTATGGTGTTTATTG # Right flank : GATGGGATGGGAGAGAGAGGACAGTTCTACTCTTGCTGTATCCAGCTTCTTTTACTTTATCCGGTATCATTTCTTCACTTCTTTCTGCACATAAAAAAGCACCTAACTATTTGGATAAGTTAAGTGCTTTTATTTCCGTTTGAAGTTG # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.02, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCAAGAAAAAAGAAATGATATGAGGCATTAGCAC # Alternate repeat : GTCCAAGAAAAAAGAAATGATACGAGGCATTAGCAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 212-32 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCHJ010000309.1 Caldibacillus sp. 210928-DFI.2.22 POLOIIEG_310, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ============================ ================== 211 24 95.8 27 ...........T............ AGTCTCATTTTTGACGACGAGACCCGT G [190] 159 24 100.0 28 ........................ ACTGCTCTATTTTGGCGACGAAACTCAA 107 24 83.3 28 ...............TG..C..G. GATGCTTGTTTTTGACGACGAGACCTAT 55 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ============================ ================== 4 24 94.8 28 TCTCGTCACCAATTTGAGGTGAAA # Left flank : GAGGGCGA # Right flank : AACTGCTCTATTTTGGCGACGAAACCCAATCT # Questionable array : NO Score: 2.55 # Score Detail : 1:0, 2:0, 3:0, 4:0.74, 5:0, 6:0.25, 7:-0.04, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCTCGTCACCAATTTGAGGTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [28.3-6.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 6119-5088 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCHJ010000121.1 Caldibacillus sp. 210928-DFI.2.22 POLOIIEG_121, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 6118 30 100.0 35 .............................. AGTCCCGTAAAAATGGGCTTAAGTTTTCTAGCTCT 6053 30 100.0 35 .............................. TCGCCTTGCATGACGCACAATGTTCGCTCATAAGT 5988 30 100.0 38 .............................. TCGTGTATATCCTTTACTTCACTTTTTGCGTACCGCAC 5920 30 100.0 38 .............................. ACAAGAATACCATAATCTGCTAGTCCATTTGCATCTAT 5852 30 100.0 39 .............................. GCTAAATCTTGCTGGGATTGCGAAAACCCCATACTTTGT 5783 30 100.0 37 .............................. CTCCAATATTTAGCATACCAAAACCGTTCGATGAGCC 5716 30 100.0 36 .............................. GACAAAGAATATGAAGTGGATTATGAGATTAATAAC 5650 30 100.0 36 .............................. TTTGGAACCAACATTCACCCCAGAGGAAGCTTTATC 5584 30 100.0 37 .............................. ATGCTTCATCTTTGAACCGCTTTATTGATTCGTCAGA 5517 30 100.0 36 .............................. CTAGATTGTTAAATTTTTGATTGCTTCCATTATCAG 5451 30 100.0 37 .............................. AAGTCTAGTATTTTCCCCGTCGACGGCTGTTCTTTTA 5384 30 100.0 38 .............................. GGAGCAATCATAAATGGCAAAAAGTATTACTTATTAAT 5316 30 96.7 38 .............................T AAGCCCATACTCACAGGCACACTTACGGTTGTTGTAAA 5248 30 96.7 35 .............................T TCTATAACGGATACAGGAATCACATCGCTTTTAAA 5183 30 100.0 36 .............................. TCATCTGTAATGCTGCCGGCTTTTTTTCCTTGACTC 5117 30 93.3 0 ...................A........G. | ========== ====== ====== ====== ============================== ======================================= ================== 16 30 99.2 37 GTTTATATCTTACCTATGAGGAATTGAAAC # Left flank : TTCTCGGTTTTGTTGACTCTTCTGTCCTATTGGTGGTAATGATTGCTGGTTCACCTAATAATTTACCCTATTATTTGAAAGTTTTTATTGGATGTCAGGATGATAGAAGCCTTTTGCATTCATCAGGTGAAAAAAGTTGGATCTCCTGTTGCCCCATCAATAATGACGAGATTAGTATTTGGGATTTTTTTAAAACGTGTATGGAATTTACGAGATATTTCTCTGTTTTTGCGGAATGGACCAGTTCTTTCATTGAGAAAAACATCACGTTGTATTCTTGACAAAATGTAATTGGACTAGTGGAAAATTTTTGTCGTCGACCTCCAGTAGTGTACAAACCCCGGGGGATCGACGACAAGTTATTTTGAAAAATAATCAATAGAAAATGCCTAGATTACGTGTATTTATGGAAAATATAATTGCTAGAAAGCCAAATTTTTATTATAATTAACACAAAACCACCAATACAAAAAAACCTTATTAAATCAAGGATTGTTTGG # Right flank : TGCTTGAGCAAGATATTCTCGAATCACGGATATGGTTAAAGTTGCCAAGAACATATAGAACTGAGGTCACTGATAACAAGGTTCACACCCATATAAGATGGTTGACCACAAAGAACCACTTGAATATAGGTACTTTGCCAAACTATTTCATAATATTATTATACGTTTCATAAAAGAAAGACATTAATGGTTCAATGATGCCTTCATTAATATGATTATTTCCTGAACTGGCAATGATTTTATGAAACTCTTTATCTAATTCATCATAATTGTCAACATTATTTCTCATCGCATCTATCGACTTTTTTAAACTTTTTTAAACTTTTCAGTTCAGTTTCTGTTATTTTTTCTGCTGCTAATGTGACAAATCCGAGTTCCTGTGCCATTCGTGTTTCCATTAGAATATTTATATCCGTTGCAGTAATAGCATCAAATGATATGGGCGCGTACCTATTTTATGAGATATAAAGGTCCCTTCTTTTGTTCTTCTTTCAATCACT # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATATCTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.68 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 398-1733 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCHJ010000186.1 Caldibacillus sp. 210928-DFI.2.22 POLOIIEG_186, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 398 36 97.2 34 ..........T......................... AAAGTAATGAAGGGCAAAAATTATTTCAGGCTTT 468 36 97.2 34 ..........T......................... ATAATCTTTTTGTTACTTGCCCACTTTACGAAAT 538 36 100.0 38 .................................... AAATAATATCGAATAGTAATAATACAAAGACATCAAAT 612 36 100.0 36 .................................... TTGCGCCGTTTTTGCGGTGCAAATAAAACTGATCCA 684 36 100.0 35 .................................... TAACCATATTAGCGGTATTGTAGGAGGGATATTAT 755 36 100.0 36 .................................... AATTTCTCACTAATTTTATAGGCAATATCAAATGTT 827 36 100.0 35 .................................... TCAATAAACCATTCAAGCATGCGATTCCCTCCTAT 898 36 100.0 35 .................................... CATTGAGTTTGTCCTTTAGAATTTGTCCACTTAAA 969 36 100.0 35 .................................... ATTGTTGCAGCTATACCTCTACCAATCGCACCTAA 1040 36 100.0 36 .................................... TATTTTAAACCTTATTCTGTTTTTATTCCGTATTCG 1112 36 100.0 37 .................................... TTGATAAATTCCAATTCTATCGGATAAATGAAATTAT 1185 36 100.0 36 .................................... AATTACAGTGAAAAAACATCAAAATATGGAGTTATT 1257 36 100.0 38 .................................... TAAATAAATCCGATTTTTATTCTTCAATATCCACTTTA 1331 36 100.0 36 .................................... TTCATAAGATTCATATTCTCTGCAACCTTGTCCCGT 1403 36 100.0 37 .................................... CTAAAACTGAATTTATGAGTAAGCAGGAGCGGGGGGC 1476 36 100.0 37 .................................... TTGATACTATCAATTTTTGTTTCTAACACTTGCCTAC 1549 36 100.0 39 .................................... TCATACTCAAATCGCCTCCGATAAGTTCGTTATGCTTGC 1624 36 100.0 38 .................................... GATAAATATACGTTCATAGACGAAAAAAGTTTCACTTT 1698 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 19 36 99.7 36 GTCCAAGAAAAAAGAAATGATATGAGGCATTAGCAC # Left flank : TTAGAGTAAATTTTTTTAATCTAATCTAGAAAATCAGTACATCGCAAAAAGCTCAATAGAAAAATATATTGTTAAAAAATAGGGAATATTATATAATGGACTTACGAGGTTCTGTCTTTTGGTCAGGACAACCGTCTAGCTATAAGTGCTGCAGGGGTGTGAGAAACTCCTATTGCTGGACGATGTCTCTTTTATTTCTTTTTTCTTGGATCTGAGTACGAGCACCCACATTGGACATTTCGCATGGTGGGTGCTCGAACTATAGGTAAAACAAACCTTTTTAAGAAGAATACAAAAATAACTACAATATTTTTTAAAAGGAATTTTGATGGATTTACATAACCTCTCGCAACATGCTTCTAAAACCCAAGCCCACCATAGCCCAAAACCCCCTGCGG # Right flank : GATAAATATACGTTCATAG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCAAGAAAAAAGAAATGATATGAGGCATTAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [46.7-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //