Array 1 1706081-1709408 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016432.1 Prosthecochloris sp. CIB 2401 strain CIB2401 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 1706081 28 100.0 33 ............................ CGTCTATAGCAGAAGTTACTTTATTCGAAACGT 1706142 28 100.0 33 ............................ CAAAGTATCTTAATAGAATCATGTTTAAGGTTC 1706203 28 100.0 33 ............................ TTGCCTAGACAAAACAAATGCGAGGCGACAAAA 1706264 28 100.0 33 ............................ CCGCCTCGCCAGTTGCATCTCCGTTAGGGACGA 1706325 28 100.0 34 ............................ ACACATTTTCTTTATTTTCTTTAGGGATAAAATA 1706387 28 100.0 33 ............................ CTGACCTTATCAGCGTGCTGAAAGATACACGGT 1706448 28 100.0 33 ............................ CTAACGTGCATCTGACTGTTCCAGCAGGCACGC 1706509 28 100.0 33 ............................ TTTTATGCTTTCCTCGCGCTCGGTTGTGACGAA 1706570 28 100.0 33 ............................ CGTTTGTCGGGATAAGCTGTGGCAGGCTTTTAA 1706631 28 100.0 33 ............................ TGCTTTTGGACTTCACTTGTACATATCCGCCCG 1706692 28 100.0 33 ............................ TCAGGCCGATCGGGTTTGCAAACATTGCCGCGT 1706753 28 100.0 33 ............................ TAAGCCTATCATGTCGCGTATACCCCCATATCA 1706814 28 100.0 33 ............................ TAAGCCTATCATGTCGCGTATACCCCCATATCA 1706875 28 100.0 33 ............................ TTTCCCCTTATTAAACGCCTGTGAAAGCTGAAG 1706936 28 100.0 33 ............................ TGGGACGTTTGCAGTTGGTGCGCCAGGTATCAG 1706997 28 100.0 33 ............................ CAATCTCGGTTGCAGTGGCTGAAGCGTCAGCGG 1707058 28 100.0 34 ............................ CATTACATGTGCTGGCGATTCTTGGATGTCCGTA 1707120 28 100.0 33 ............................ GGAAGCATGCATCAAGAGTGTCCGCACCGACGC 1707181 28 100.0 33 ............................ CTATGATGCCGCTGATCTTCGCGCAATCGAAGG 1707242 28 100.0 33 ............................ TCATCAGTATATACGCCAATAGCCTTCATCACG 1707303 28 100.0 33 ............................ CTTATCAGCCTTCTCGATAACATGGTCAGCGAC 1707364 28 100.0 33 ............................ CTTATTTCCGACTATCGTGACAGCTTGTCCGAC 1707425 28 100.0 34 ............................ TCTATGCTGGTCTCAATCTTTTGGCCTGCGTGGG 1707487 28 100.0 33 ............................ TCGCTACCAAATAGTTATCTGTGTCGTCGCGGT 1707548 28 100.0 33 ............................ TGGGTGGTACTCTCGCATCATTATCCCTATCTT 1707609 28 100.0 33 ............................ CCAAAAAACCAAAAGCCTTCCAGGGAGGACGCC 1707670 28 100.0 33 ............................ CGCAAAAGACTCTCCCGTAAAACTTCCCGACGC 1707731 28 100.0 33 ............................ TACCTACTATGTCATCTCCTTCCGGAGGTTATC 1707792 28 100.0 33 ............................ CACATGCTGAGCGGGTACTCAATGATAACACCG 1707853 28 100.0 34 ............................ ATATCATCCCCTACTGCATCATCATCGTCGGAGG 1707915 28 100.0 33 ............................ TCCCCGCGTTCCACTTCTCCGTGTCGATAGTTT 1707976 28 100.0 33 ............................ TATCCTTGGTTTGATCGGATCGGTATCGGACGC 1708037 28 100.0 33 ............................ TCCCAGCGGGTTTCAGCTCGTATATTTTAGCGG 1708098 28 100.0 33 ............................ TATCAGATGCCTCGTCACCAGATACAGCGGTGT 1708159 28 100.0 33 ............................ TCGGCAACCTGGGCAAAGACCCTGAGGTCCGCA 1708220 28 100.0 33 ............................ CGAGGATGTCACGTCGATGCGGGCAGGAAATGA 1708281 28 100.0 33 ............................ AAAGGGAAGAATGCTCGAGACCGGCTACTCCTG 1708342 28 100.0 33 ............................ TGATAAGTCTACATCATTGTCACAAGCACCCGA 1708403 28 100.0 33 ............................ TTTCCAGCGTTTCATGGGCGAACAAGAGAACCC 1708464 28 100.0 33 ............................ TAATAGGGCTCCAGGCGGACGGGCTCCAGGCGG 1708525 28 100.0 33 ............................ TCCGATCGCCCAGACATCTAGTACCGACGCTAC 1708586 28 92.9 33 ..........................CT GCACCGGGACAGGCTGAGCCTCGGCATCTGGAC 1708647 28 100.0 33 ............................ CACGGCTCGGCGCAGTCTGCGGGACAGGGTCTC 1708708 28 100.0 33 ............................ CAGATGGAACGTCGTAATCCCATTTTTTGCCCA 1708769 28 100.0 33 ............................ CTCAATCGCTTGACCGTCAGCCGGTGTCCGGGG 1708830 28 96.4 33 ..................A......... TCGAAGGCTCCGGCAGGCTTGATGCTAACGAGA 1708891 28 100.0 33 ............................ TACAGGAGGTATTATGAACTCAATCAGGAGGCG 1708952 28 100.0 33 ............................ CGCGCTTACGGGTGCTGACCTGACGGAGCGTGA 1709013 28 100.0 34 ............................ TCAGGTCGGCATCACGCAGGTCGGCCTCGCACAC 1709075 28 100.0 34 ............................ CATTATCAGCGACCGGAGCCCCTTCCTCAACGGG 1709137 28 100.0 33 ............................ CAGGGATCAGGTCAATCACCGTGGAGGTCGCCG 1709198 28 100.0 33 ............................ TACTACACTCCTGGGATGAGAGCCGAGAGTGTC 1709259 28 100.0 33 ............................ TATTTTCATCAGCAACCAGTTGAGCCACTGTGC 1709320 28 100.0 33 ............................ CAGCCAGCGACCTGCCAGATCCGTCAAGCACGG 1709381 28 89.3 0 .....................A.A.G.. | ========== ====== ====== ====== ============================ ================================== ================== 55 28 99.6 33 ATCTTCCCCACGCCCGTGGGGGTGTTTC # Left flank : GAATGCCCGGAAAGAACATGTCAGCATGATTTCGGCAGTCAACAATCGAGGAAAGCTGCGGTTCATGCTCTATGACGATGCCATGAACAGCCAGCGCCTCATCGAGTTCATGAAACGACTGGTCAAGGATGCCGGTCGCAAGGTGATCCTGATCCTTGACAACCTGCGGGTCCATCACAGCAAGCCGGTCAAGGCGTGGCTCGACGAAAACAAAGAAAAGATCGAGGTGTTCTATCTGCCTGCGTACTCACCGGAATTGAATCCGGACGAGTATCTGAACAACGATCTGAAGAGTGCTGTGCATGGAAACAAGGGCGGCGTAGCACGCAACAAGGAAACAATTCGGAAGAAGACAATTTCGCATCTGAGACATCTGCAGAAATCGCCTGGAAAAGTTGCAAAGCTATTCAACCACCCCAAAGTCCGCTATGCGAAGGCTTCGTAGTTTTAATTGCCGGAGTAATAATGCCTGAAGCCCAGAAACCCCTGTAAAACCCAGT # Right flank : CCTGGTATACGCCAACGTGAGGAATCTTATTTGCGAAAATCTGGGGATTGTTACTTGTGAAACTTGTGAAACTTGTGAAAAATTGAGGATTTTCAGTTTCCGATTACAATCAGGGAGCAAAGCGCAACATGTGATAGAGAAAAAACCATATTTTAGCTGTACGCTCAGTTTAATCCTGCAACACCGCCTATAAACTATGCCACTCAACCCTCTCCTCATCCTGCAGCATGTGGCACATGAAGGCCCCGGCCTGTTCGGAGAGTTCCTGAAAGTAAAGAATATCGGGGTCGATATCGTCAATATCTATGATGCACATTGCCTGCCGAATCCTTCAGACTACAAGGCGGTCATCACCCTGGGAGGACCACAGAGCGCAAACGACCGTGACGCGGCCATGCAGAGGGAGCTGAGGAACCTCGAGCGCATTCTCCGGGACGAGATCCCCTACCTGGGCGTCTGCCTTGGGATGCAGACCCTTGTGCAAGCTGCCGGCGGACAGG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCTTCCCCACGCCCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //