Array 1 980-464 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_UKGL01000006.1 Klebsiella pneumoniae strain EuSCAPE_AT030, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
       979	    28	 100.0	    33	............................	CTGGCTGTCACAGGCACGTTTGGCGTTACGCAG	
       918	    28	 100.0	    33	............................	CGAAACCCAGATACCGGTAAGCCAGATTCTGGC	
       857	    28	 100.0	    33	............................	CAAATGGGAGAAGCTAATCGTTGGGGTGCTGAA	
       796	    28	 100.0	    33	............................	CATCGACCTGAGTTGCAATGCGATTGCGAAAAT	
       735	    28	 100.0	    33	............................	TTCCATCATCTGCGGCGGGATAGCGCTGCGGGT	
       674	    28	  96.4	    33	............C...............	CCTGCAGCTGGCCGTCGAGCTGACGGATGCCGG	
       613	    28	  96.4	    33	............C...............	CCTGCAGCTGGCCGTCGAGCTGACGAATGCCGG	
       552	    28	  96.4	    33	..............T.............	TTCATCACGTGTGAGCGGATTTGGCTCTATCCT	
       491	    28	  92.9	     0	...................A.......T	|                                	
==========	======	======	======	============================	=================================	==================
         9	    28	  98.0	    33	GTCTTCCCCACATGCGTGGGGGTGTTTC	                                 	       

# Left flank :   TTAGCGTTGGCGAGCCGGCGACGGCGGTGATCCGCGTCGAGCGCCTGCGACTTGACGGCGCAGCGCAGGATAACAGCCTCCAGCTACCGCTGCTGACCAGCATGTACCTCGGCGACCGCTGGGAGTACCTGTTCCGTACCGAAGGCGACGACTTTCCGCTGCGCGCCTACGGAACGGCGCTGCGCGATGCCGAACACTGCCATCTGACGCTCCCGGCGGAGGATGTGTGGATTTTTCCGCAGCGGTAACTTCGCGAAGCCACGGAAGGCAAGCGCCAGGATGACGCGCTACGTTCTGGGGATGACAAAAGCGTTTTACCCCCGGCTGCGGGCCGGGCAGGCCAGTAGGGTAGACCGGTCCAGGTCAGCAGCAAATCGACGGTGGTTATATGGTGACATACTTTTTCGTTTGATGAATGTTGATGCTGATGCGGAAACCCTGCGGAGTGCAATTGTTGTAAATCTGGCGTTTTAATACGCCGCTAAACACAATATGCTGGT
# Right flank :  TCGCCTTTCAAGTGACGACAAGTCACGTCTGTGCGCATTTCTCAGATGAAAGGGGATTCCTGACGTAGAGGCATCAATGCCGTGACATAGTTATCCTTAATGTACATCAATGTCTTCGAAATTTCGTTTGGCCAGCACAGTCTCATATGTTTTTTGTATGATTTTACTTATAAATATTCGTGAACTATGTTTGTCCTATACTTTCTTTAGGGGTATCTAAATCATTCGAGTTTATTACTCGTCTGGAGATATTGTTCTTCATATTAATTATTTATAGCTTTTTATATTATTATTTTTGGCTTTTATCTTTAATTCAGTGTGTTGTGGATATTTTTGATTTTATAAAAAGTTATTTATAAGTTTCCCGGTTTGGTAATGACTCCAATTTACTGATAGTGTTTTATGTTCAGATAGTGCCCGATGACTTTGTCATGCAGCTCCACCGATTTGGAGAACGACAGGGA

# Questionable array : NO	 Score: 6.16
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTTCCCCACATGCGTGGGGGTGTTTC
# Alternate repeat :   GTCTTCCCCACACGCGTGGGGGTGTTTC

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [9,2] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCTTCCCCACACCCGTGGGGGTGTTTC with 93% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-10.80,-11.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [3-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [50.0-56.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.28   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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