Array 1 23424-21688 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWIH01000006.1 Streptomyces sp. SID5476 SID5476.c6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 23423 29 100.0 32 ............................. GTGATGTCGCCGTAGTGGGTACCTCCGGTGAC 23362 29 100.0 32 ............................. CCCTGCACCGTGAACTCGCCGAGCTGGGCGAA 23301 29 100.0 32 ............................. GCCAGCGCCGGGTAGGCGCCGGGCACGCTGAC 23240 29 100.0 32 ............................. GCGGAACGCGGCGAGCTTGTCCTGCGCCTTGG 23179 29 100.0 32 ............................. GGGCTGCAGGGGCCGGTAAGGTGACGCTCACC 23118 29 100.0 32 ............................. TGGGGGGCGCCGACTCCGCGGCGGCCGCCGAC 23057 29 100.0 32 ............................. AAGTTCGGGCACTACGTGAAGGCACGGTGGGG 22996 29 100.0 32 ............................. CGCCGCCAGGTCGCCGCCATGGACGACGTGAC 22935 29 96.6 32 ............................C CACCCCAGGTGCCGCGTACGTCGCCACCCTCG 22874 29 96.6 32 ............................T TCGCTTTGACACCAACGTCGGTCCGGTTGTTC 22813 29 100.0 32 ............................. ACTCGTCGGCACTGACCACCCGCAGAGCAGCG 22752 29 100.0 32 ............................. ATCTCACTGGTCGCGGTGACGGCCGTGTTGCT 22691 29 100.0 32 ............................. TCCATCCCCACCGAGAGTCTTGATCAGTTCGA 22630 29 100.0 32 ............................. CCGCGATCCGGCGCTCGGACGAGGCCACGCTT 22569 29 100.0 32 ............................. AACTCCTACGGGGCGGTGCGGTCGGGCGGGTG 22508 29 100.0 32 ............................. GATCCTTCGGCGCTGCTGGATTACAGCTGGGA 22447 29 100.0 32 ............................. CCGCTCGCCCTCATGCGGTGGCTCGTACGGCT 22386 29 100.0 32 ............................. ATCCGGGGGCGGGTCGGTCCTCTTGTTCTCCA 22325 29 96.6 32 ...T......................... AACGGGTTGCGCTACGCGCCCGGCGAGACCTC 22264 29 100.0 32 ............................. GCCGACAGCATCCGGGCCCTGCTCGGTGCCCG 22203 29 100.0 32 ............................. TTCGTCACCGACATCGCCACCCTGGTCGGCAA 22142 29 96.6 32 .......................A..... ACGGCCGCGCTGCTGTGCCGCGCCCACCAGTG 22081 29 100.0 32 ............................. ATCACGTCACCACCGTCGTTCACCGACGCCGC 22020 29 96.6 32 .........................T... AACGTCCCGGATTCGGCGGCCTGCCACTGGGT 21959 29 89.7 32 G........................T..A TCAGACTACGAAGGCCGAGGAGTTCGTGAGGC 21898 29 89.7 32 G.......................GT... CGGAATCGGAGCGCCGCGCCGGGGAGGAAGCC 21837 29 89.7 32 G.........A..............T... ATGCTCACCGTCGCGCTGCTGGGCCCGTCGCT 21776 29 93.1 31 G........................T... CTGCAGGTCGCCGAGTGCGCTCCTCGCACCC 21716 29 86.2 0 G......T.................T.T. | ========== ====== ====== ====== ============================= ================================ ================== 29 29 97.6 32 CTGCTCTCCGCGCGAGCGGAGGTGAACCG # Left flank : TCGCTCCGAACCGCCGCGAACGCCTCCGGAACCTGAGCCTGGAACGGAGGAGTGATCTTCCCCAGATCATGCAGCCCCGCCCAGAACGCCAGCACCTGCCGGGTCTCGGCCATCGTCAGCCCCAGCGCCTGCGTAACCTTCTCGCGCACCTGATCACTCAGCAGCGCATCCCACAGTGCGCCGAACACCGCTGCGGCGTCGAGCAGATGGCAGACCACTGGGTACGGACGCGGAAGGCCATGTTCCTTGCCCCACAACCGGATGTCGATCGGGGGATCCCCGGGAGGGGCGGACTCACGCTTCATCATGACGGCAACGGATAGCAGGCCCCACTGACAATGCGCCCTCACCTGCGCGAAGACCAGACCACAACCGGCACGGGACCGTAAACTCCACACCATGGGGCCACAGTTGACGCGATATCTCGCCGATTCGGAGCGAACCGATCCACACACCGCAAAGAACTTGCAAAGTGCCTCAAGAAGCCCAGGTCAGCAAGC # Right flank : CCGGTGGGGGAGCGGACCGTCCCCATCTACCCGTGCTCTCCGCGCGAGGAGCAGATCGGAGCAGGAAGACGCCGTGGAGTCCGGCCACTAGAGCTGGGTTGATGCGGTGGATCCTGGCTTGCTCGTCCCGCTGGAGCAGTCGGCCCGCGCCGGCTGGGCCGACGTGGCGCTGCACCGCATGGAAGCGGGTTATGGTCCCGCCGATCTGTTGTTGCGGGATGGGGCTGGAGGGGTGCGTGGCGAAGTACTGCTGCACCGCGTCGTAGTGCAGGGTCGATGCCGGGATCCCGGTGGGGTGCGGCACATCGGTGATGTCGACTTCTGCCATTTTGCTTGACCTCAAGTCGGCGTGAAGTAGAACGCCTGTCATCCCGGCATGGCGAATGCAACCAGAAGGAGAGAATGCGATGGATTCTGCCCGTGGGGCCGATGACGAGCAGGCAGCCCGTTGGAATGGCCCCGTCGGTCAGGCGTGGGGCGAGCTGAAGGGAGTACTGGAG # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCTCCGCGCGAGCGGAGGTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCTCCGCGCGAGCGGAGGTGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 33171-34429 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWIH01000006.1 Streptomyces sp. SID5476 SID5476.c6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 33171 29 100.0 32 ............................. CCCGCCAGCAGTGGACCTGAGCCAGGGGAACA 33232 29 100.0 32 ............................. CCCCTCGTCTACGACGAGAACGTCGCCATGCA 33293 29 100.0 32 ............................. CGGTTCGGACAGGTTCTCTACGAGAAGCTGGG 33354 29 100.0 32 ............................. CTGACCGCCGGGCCGAGTACGAGAGCGAGATG 33415 29 100.0 32 ............................. CTCGCCCACCGCACCATCGGCGCTGTCATCGC 33476 29 100.0 32 ............................. TCCTTGCGGCCCTTGGTGTTCTCGTCGACCCG 33537 29 100.0 32 ............................. CTGTGTTCTTCCTCGGTGAGCCGCCGTGGCAT 33598 29 100.0 32 ............................. CAGGCGCCATGCGGTGCCCACGATCAGCACGG 33659 29 100.0 32 ............................. AACTCGCCACCAAGCACAACCTGATCGGCCGC 33720 29 100.0 32 ............................. CGGCCGGCGGGAGCCTGAAGGAGAAGATCCTT 33781 29 100.0 32 ............................. CTCAAGCGGCTGATGACGGTCGGTCCGGCCAT 33842 29 100.0 32 ............................. TCGTTGCACGAGAACTCGGGCTTGCGGAGGCC 33903 29 100.0 32 ............................. GCGTTCGCGTCGGCCATCCGGTCGCAGGGCAC 33964 29 100.0 34 ............................. TTGAAGCGGGCCGGTGACGGGGGCCCACGGCCGC 34027 29 96.6 32 .......................A..... TACCTCCGGTTCCAGATCGGCGGCCGGGTGAT T [34051] 34089 29 100.0 32 ............................. TGGCAGCAGTGGCTCAAGGAGATGGGACGCCT 34150 29 100.0 32 ............................. CCATGACTTCCCCTTGGTCGCGTGCTCGTACT 34211 29 100.0 39 ............................. GCGCGAGGAGACAGCATCCGGCGCAGTCGCGAGGCAGTC 34279 29 100.0 32 ............................. CCCCAAGTGGGGCACCACGACCCTCCTCATCG 34340 29 100.0 32 ............................. CGGATCGCGCCGGCGGACTCGGAGCGGATACC 34401 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================= ================== 21 29 99.8 32 GTGCTCTCCGCGCGAGCGGAGGTGATCCG # Left flank : CACCGACATCCAGGACCTCCTCGATCCCGGATCCAGCCGGGACGTCCCCGATCCCGAGGAGCAACTCGTCGACCTGTGGGACCCGGTCACCGGCCCCGTGCCCGGCGGCGCCAACCACGCCGCCGACACCTGACCACCCATACTCGTGCGAAGAGGAAGAGCACACCGCCATGGCCTCCATGATCGCCATCTCCGCCACCGCGGTCCCAGACCACCTCCGCGGCGCCCTCACCCGCTGGCTCCTCGAAGTAACACCCGAGCTGTACGTAGGCACTGTCTCGGCCCGCGTACGCGACGAACTCTGGACTTCCGTGACCGCATGCACAGGTGACGGAGTGTCCGTCCTGGTTTACCCCAGTGACAACGAGCAAGGCTTCGAACTCCGCACCGCAGGAACCCACCGACGCCACCCACTCGACTTCGATGGCATGACCCTGGTCGCATTCCTGGCGGAAGGTAAAGAAACCGCAAAGCCACTCTAGCGGTGCAGGTCAGTAAAG # Right flank : GCCGAGTGGGTCCGTCTCGCAAGGACGAAGGGCGTGCTCTCCGCGCTGGCTCGGCGGGGCCCAGGCCGGTCGGTGATCCTGGTGCGCCGATTCGGCGAGCGCGTCACGGCTGACCGGCGCCAGGTATGTTGGGGTGCCAGTAGGAATGCTGTCACCAGCCGCAGGTCGGGCGGATTTCGCCACCGGCGCTGGGAACGGACACCCGTATCGGGTTGTTCGCCCTCACCGCCGGGCCCTGTTGTGGAACGCTGATCACCCACCACCTGCGACTCAGGGGCGTGTCCTGTAGCCGCCTCAACCGCAATCGGTGCCCGTGCCGTCGGGACGCTGCGGAGTGGCCCGAGTTCGACGACATGCCAGCCCCTGTGGCCGCCTGCTGGTCGCACCTCACCGACTCTGAACGTGAGCAGTGCACGGCCGCTCGGAGCCGCCGGAACAAGGAACACCTCGATAGGTGCACCTGGTTGGAGCAGACGATCGCGGCGGCCCGCGGCGGCGCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGATCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //