Array 1 560342-562483 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGSPL010000001.1 Undibacterium rugosum strain BYS50W NODE_1_length_682743_cov_34.816200, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 560342 32 100.0 34 ................................ TGACCATCCGTCAGCGGCACTTTAATGCAGTCCA 560408 32 100.0 34 ................................ ACCGCGATTCCGCACACTTCATCGCAGTCTGCTG 560474 32 100.0 34 ................................ ACCAGGTATGCATGTGGGGCCGCGTGATCACATT 560540 32 100.0 33 ................................ GTTGCAAGGTGCCGTCTTTGGTGATCCGATAGC 560605 32 100.0 34 ................................ TGTGTTCAGCCTATTTCGTATCTTGAAATAAAAG 560671 32 100.0 34 ................................ ACCAATACGATTGCGGACACCCCGACCATGGCGC 560737 32 100.0 35 ................................ ATGTCCATAGGATGGACTTTATCAAATTGAGAAAG 560804 32 100.0 34 ................................ AACCCTCTCAAGATGACGGAGCTGGCGGCCAGCA 560870 32 100.0 34 ................................ TGGTGTGTATCCGAATGGGCAAATTCATATTGGT 560936 32 100.0 33 ................................ ATTGCCTCCTGGAGGCGAACACTAATCACCATT 561001 32 100.0 34 ................................ CAGCGTCCGGTAACCACTCAAACCGAGCAACCCA 561067 32 100.0 34 ................................ TGCATGAAATCGACATCGAAAACATGGTGCAGAT 561133 32 100.0 34 ................................ CAGCGCGATGACTGCGCCAGCCAGGTAATTGATT 561199 32 100.0 34 ................................ ATGCCGCTTCGTTTGCATCACCGCCAAGCAATGC 561265 32 100.0 34 ................................ CACGTCACATGACCGAGGAAGAAAAACAAAAGCT 561331 32 100.0 33 ................................ AACTGATAAATATTGTTACAACAGAGGCTTTAA 561396 32 100.0 34 ................................ CTTGTAGATCGGTAAGTGGGTATGTATAGCCATG 561462 32 100.0 34 ................................ AACAGTTTCAGCAACGTAGACCCGGCCAGCGCGC 561528 32 100.0 34 ................................ CAGCGAGCCCTCGATGGTGTTTTTCGAGCAAAGC 561594 32 100.0 34 ................................ CTGACATTTGTTTATGTATTTATGGTCAGCGACT 561660 32 100.0 35 ................................ AATACCTCGTTTGGCGACTTGTTTCCCAAATCAGA 561727 32 100.0 35 ................................ TTACTGATCCGTTGAACAACGTGATTAATGATGTT 561794 32 100.0 34 ................................ ACTTGCAGGGGCTGATACGTATGATGTCCAGATA 561860 32 100.0 33 ................................ AGAGTAATTGACTATGACGCGATCTTTAGTTTG 561925 32 100.0 35 ................................ TCTGCAGCCAAACAGATTAAGTGCTGCCGATTAAC 561992 32 100.0 33 ................................ TAAAGCAGTCGAATGCCCCAACACCGGCGCCAT 562057 32 100.0 34 ................................ TGTACCCAATCGGTCTTTTTAAGCCATTCGTTAA 562123 32 100.0 34 ................................ ATCACCCTTTCAATGTCAATTTGTTGCTGCGCCG 562189 32 100.0 34 ................................ AGGATCACCGACTCAGGACCCACAACAATACGGC 562255 32 100.0 34 ................................ AGGATGGAGCAGAAAGGTCTGACTCCAAAAGACC 562321 32 100.0 33 ................................ TAGGCTCACACAGCCACTGTACGATATGCTTAT 562386 32 100.0 34 ................................ TGGGTCGAACAAGGCGGTACATACGCTGGAATCG 562452 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 33 32 100.0 34 GTCGCGCTCTTCGCGAGCGCGTGGATTGAAAC # Left flank : CCCTTTTTAGTTAAATAAGCCGAGGTGTGCAATGCTGGTATTGGTGACTTATGATGTGAGTGTAACGACCAGTGAAGGCCGTCGACGCTTGCGTCAGATTGCAAAGAAATGCCTGGACTTTGGTATGCGGGTGCAAAACTCGGTGTTCGAATGTGAAGTCGAGCCATCTCAATTTGTTCAATTCAAGAATGACTTGCTAGAGATTTACAACCCGGAACAAGATAGCTTACGGTTTTATTTTTTGGGTAAGCAAGGCCGTCAAAAAGTAGAGCATGTAGGTGCCAAAGTAGTCGCAGATCCATTGCGTGACGCACTCATTCTGTAAATCGCTAACCCACAGTTCCCCACACTTCCTCTTTAGATTAGCGATTTCTAAGTATCTGTTTTAATTACTTATTTTCCTGTCACAATTTACTTTTTTTAATTGCCCTGCTTAATTTTCCAGACTTAGCGGAATTACCCGGTTTTTTCTATTCAATTGAATAGGTTAGAATCCGGGC # Right flank : CCAGTGTGCGGCGCGAACGGCCTCACGGTCTGTCTGTCGCAGTAGGGCAGACAAAATTCTCGTGTCCTTGTGTGGACGTGCTGATTGAGATTTCGCCAAGAACTTATTGGTTTTTTATTGCTTCATCTTGTCGCTTCAAGAGTCGGGCACCGCGCGGGCAGTGCCGGATTCGCACATCATTGAGTTCAACAGATCAGACAACTCAAACAGCAGCTAATGCAGCACGTACATAGTCGCTGAGCGGGGTGGTTGGGCGGCCCAGCAGTGCAGACAGTTGTTTGCTGTCGTCAAACAAGATGCCTTTGGCGGCTTCCACATCCCAGCCTGCGATGCCGTTTGCCCAGACTTCCGGTAAGCCAGCTTGCAGCAGGATGGCCGCAAATTCTTGTTCTGGCAGCGAATGATAGGGAATTGTTTTGCCGGTTTGTGCAGAGATTTCCTGCGCGATTTCAGCCATAGTCGGTGCGCTGTCACCGGCCAGTTCATAGCTGCGTTCTGCG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCTCTTCGCGAGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCTCTTCACGGGCGCGTGGGTTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.80,-5.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [58.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.27,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //