Array 1 299011-297092 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH379513.1 Lacticaseibacillus rhamnosus ATCC 21052 Scfld737, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================= ================== 299010 36 100.0 30 .................................... AGTAAGGTAGCCAAATACAACCATAAGGGT 298944 36 88.9 45 ................................NNNN NNNNNNNNNNNNNNNNNNGAATACGATTATAAGACAGTAGTTTGG 298863 36 100.0 30 .................................... TTTAATATGCAGGCGGCGACTGATTTATAA 298797 36 100.0 30 .................................... TGATTTGCGAGATGTCGCGATAAGAAGTCA 298731 36 86.1 33 ...............................NNNNN NNNNNCTATCTAACACGCTATACACAGAATGGC 298662 36 100.0 30 .................................... TTTAATATGCAGGCGGCGACTGATTTATAA 298596 36 100.0 30 .................................... ATAAACATCGTATGCGAATCGTAACAACGT 298530 36 88.9 33 ................................NNNN NNNNNNTGATTGAGGCGCGGATGTACATTCCTG 298461 36 100.0 30 .................................... GACAACAGACTCCGTCAACATCAGTCTTAA 298395 36 100.0 30 .................................... AAGGTGTACTGCTTAGCTGACTCCCACGTG 298329 36 100.0 30 .................................... TTTAATATGCAGGCGGCGACTGATTTATAA 298263 36 100.0 30 .................................... GAAAGTTCTTTAAGTTGACCACTCATTTCA 298197 36 86.1 34 ...............................NNNNN NNNNNTCGTGACTTGTCGTGATATGCATACGCGC 298127 36 100.0 30 .................................... CCGTTTTGGTTGCAAAACGAACCGATTACG 298061 36 100.0 30 .................................... TAATGACGCTTAACGCTCTCCGGTTGGTCA 297995 36 100.0 32 .................................... TCAGGGTGCCGGCTACATATACACGACTTTCG 297927 36 100.0 30 .................................... AAATGGTTTGAATACCCTTATCCCGCCATT 297861 36 88.9 34 ................................NNNN NNNNNNGACGCAGTTGGCGAAACCTTTGCACGAA 297791 36 100.0 30 .................................... GCGTGTTAGTCGCTTGTGTGGCTTACCGAA 297725 36 100.0 30 .................................... GGCAATTTTAAAGCCGTGACCGATGCCACG 297659 36 100.0 30 .................................... TCGCTGACATTGACCATCAACGGCGCCGAG 297593 36 100.0 30 .................................... TCTGGAAGCCCGCAATAGTCAATTGAATCA 297527 36 100.0 30 .................................... TTTTATGATGGGCTTGTATTTTCCCAAATA 297461 36 100.0 30 .................................... TGATGACGAAGTGAGTTTGCCCACCGCTTG 297395 36 100.0 30 .................................... GTTGACGCGTTGCGCTGTCGCTGGCCGTTG 297329 36 100.0 30 .................................... GCGGCATCTTCAAAATCAAAACGACGCGCA 297263 36 86.1 32 ...............................NNNNN NNNNNCAACATATCAATCAAGCCGAAAAAAAG 297195 36 100.0 30 .................................... ACTCGGGTATTGACAAAGATCGACGCGGCA 297129 36 86.1 0 .......................AA.C....G...G | T,C [297095,297101] ========== ====== ====== ====== ==================================== ============================================= ================== 29 36 96.9 31 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : GAGCTGGATTTGGACAAGTTATTTCAACGCTTGATCATCAAAAAGGTAAGCCAATTGATAGAGGATCAGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAGGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTCAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTGCCAACATCAGTCATTATTTAGATGTTGAAAGTCTGAGCAAGCTGTTAGATCAGGTTAAGAACACATCGTTGGAATTACTTCTCATTGAATTTTCAGATGTCGAACGCAGAAAGTTTTTTGAGAAGTGCCAGTATATCTATATTGACAGAGATTTTATGGATAGCCGAGAACTGATTGATTAAGAGGCTGTGTGAAAACACCG # Right flank : ACTCACCTCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCAATGTCAAAAGCGAAACTAATCCTTTCGCCAGTATTTTACACTGATCTCAAAGAAATCCGTCACATGTACCAACAGGCGTTCAAATCACTTTACGGCAAATATCAAGATCGGGAAACCAATCCCTACTGTGAATCGTTGAAAAGCTTACAGAAAAAGTTCAAACGGCCTAACAATGCCTTCTTCTTTATAACCGTTGAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCTCAAAAATTCGGCAGCCCGTATTTCACCATTTTTAATCTTGCCGTTTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCCAAGTTGGTACATTTGTATCGCAAAGTCGGTTTTCAGCAGCTACCAGATCGGGAAACGACGATTAATGAGCATA # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [12-13] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //