Array 1 521-54 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AFLP01000046.1 Leptospira interrogans serovar Copenhageni str. HAI0156 contig_46, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	====================================	======================================	==================
       520	    36	 100.0	    35	....................................	CAAGAGAAAAAGGATAAAGACGGAAACCGGTTTTT   	
       449	    36	 100.0	    34	....................................	TATTTCACCTTTTACTTTATGAGAAATTTCGAAT    	
       379	    36	 100.0	    36	....................................	TTCCTGGGCCTGGTATGTTTATATTATCAGGGGATG  	
       307	    36	 100.0	    38	....................................	AGTTGGCACTTTTCGCGGGAGCTGGTGGAGGCATACTT	
       233	    36	 100.0	    37	....................................	GCTGCTGACACTGTTATTATACCAGTAATACCGGAGC 	
       160	    36	 100.0	    35	....................................	ATCATGCGAATCCGGTGGGAACGTTGCTGGTTTAT   	
        89	    36	 100.0	     0	....................................	|                                     	
==========	======	======	======	====================================	======================================	==================
         7	    36	 100.0	    36	CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC	                                      	       

# Left flank :   CGTTAGGCGTTGAGCACGATCTCAGTCCGTTGATAAACTCAATTACGGAAT
# Right flank :  CCTAAGTTCGATTTTTCAATCTTTACAAACGAGGCTCTTCTGAATATAACTTTG

# Questionable array : NO	 Score: 3.26
# 	Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-4.00,-7.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [60.0-48.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,0.37   Confidence: LOW] 

# Array family : NA
//