Array 1 119376-119526 **** Predicted by CRISPRDetect 2.4 *** >NZ_KL571064.1 Streptomyces monomycini strain NRRL B-24309 P063_Doro1_scaffold15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 119376 29 79.3 32 T.G.G.....................TCC GTGGAGTTCATACGCACGCGAGATCCGAGGGG 119437 29 100.0 33 ............................. GACTCCGCTCGTGCCCCTGGCTGAGGGGTCGGA 119499 28 89.7 0 ........-.................A.G | ========== ====== ====== ====== ============================= ================================= ================== 3 29 89.7 33 AACACCCCCGCACCCGCGGGGACCACGGT # Left flank : ACGCCTGGCTGAAGGAAGGGATATACGAGGACTGGACCGAGCGCGCCGCACCGATCGACGTCGAGACCCTGCTGATCGTCGCGGACGGCGACCCGACCTGGGGCCTGGAGATGCAGAAGAAGCTGACGGTGCCCCACCTGACCAACGTCACGATCGCGTCCATCGACTGCGGCCACCAGGTACCGATGGAGGCGCCGCAGGCCCTGTCCGGCCTGATCACCGCCTTCGCCGCGTCATGACCGGCGCCGCTCAGCCCTCGGCTGAAGACCGGGACTGGGGCGGGCGACTGCCCCTGACCTCTTCGCGACACTACGCCGTTCAGCTCACCTGAGCCGTCGACGCCGCATGCTCCAGCCGCCGACTCGCGCGCTCACCCGCCAACTGAAGCACTCAGTCACACTTCGGCGCCCCGGCTCGTGAACACCTTTACAGCCGTCCCGACTGCATCGACGGGAGGTGGCGCGCTGGGGCGGAACGGCGCCTGCGCGGGGAGATGCTGG # Right flank : GCCCTGACCAGCAGCTTCAGCAGGCGGAGCTGCTGATTTTGCTTACTTCCGCTGAATTCGACATAGCCGGCATATGTGCAGGCGTCGACGGGCTGCTCCGATCGTGCGTGTGTATGGGTGTGATGTATGGAGATGAAGCCGAACCCGTGGAGAACGGGCCCGGCTTCATCGTCATTTCCTGACCTCGCGTTTGCAAGGGGACGCGCCCTGTCCGGGCGCACCGGCCCTGCCTGTCGTGACCGCCTACTTGATGGACTTGATCAGCTCACCGTTCGCCGTGTCGCCGCTCAGCTCCCAGAAGAATGTGCCGCCCAGGCCTTGCTGGTTCTTGTACGCCATCTTGGTGCCGATGGTCTCCGGGGTGTCGTAGCTCCACCACTGGCTGCCGCACTTGGCGTATGCCGTGCCGCCGACCTTGCCGGTTGCCGGGCAGCGGGTCTTGAGGAGTTTGTAGTCCTCGATGCCGGCCTCGTACTTGCCGGGCGCCGCGCCGGTCGCCG # Questionable array : NO Score: 3.66 # Score Detail : 1:0, 2:3, 3:0, 4:0.49, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AACACCCCCGCACCCGCGGGGACCACGGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,0] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.30,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [26.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 63214-63365 **** Predicted by CRISPRDetect 2.4 *** >NZ_KL571070.1 Streptomyces monomycini strain NRRL B-24309 P063_Doro1_scaffold21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 63214 29 100.0 32 ............................. CTCTGATGGGGCGGGGGTGCAGGGGGTGATGC 63275 29 100.0 33 ............................. ACAGGAACTTGTCGCGGAACAACCAGGAGACAA 63337 29 89.7 0 .....................T..CC... | ========== ====== ====== ====== ============================= ================================= ================== 3 29 96.6 33 GTGGTCCCCGCGTGTGCGGGGGTGGTCCC # Left flank : CCGGAGGGTATGCCGGATATGCCGGATTCCCAGAAAGTAAGTAAAGACCGCCACCCGCACTGAAAAACGCGCTGGTCACGGCCTGTGGTCCCCGCGTGTGCGGGGGTGGTCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGGCGAGCCGGAGCCATA # Right flank : GCGGCCGGGGCCCAGTTCTTGAAGCCGGGCCTGTGGTCCCCGCGCGCGGGGTTGGCCCGTCGCCGCCGATGTCGTCGTGCAGCTCGTCGCGGCGGTCCCCGCGCCTGCGGGGTCCACCCCCCGCTGGATCGCCCCCTTCTCCATACCCAGCCG # Questionable array : NO Score: 5.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGTGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [10.0-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 55201-54387 **** Predicted by CRISPRDetect 2.4 *** >NZ_KL571098.1 Streptomyces monomycini strain NRRL B-24309 P063_Doro1_scaffold55, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 55200 29 96.6 32 .........................C... AGGACACCACCCTCGGCGTCATCGTCTCCGAG 55139 29 100.0 32 ............................. TGGACGCTGTCATGGATGTACGGCAGGGCCCG 55078 29 100.0 32 ............................. TGCCCGCCAGCGCCGCCCGCTCCCTGCCCATG 55017 29 100.0 32 ............................. ACGGCGGAGAAGGGGCCCGGCGGGTACGGGTG 54956 29 86.2 26 .......................TGC..G CCAGCGCCGCCCGCTCCCTGCCCATG 54901 29 100.0 32 ............................. AAGGCCGTGGAACAGGTGCACATCATCGAGGC 54840 29 100.0 32 ............................. GACTCGTCGGCATAATCCGGTCCGCCGCTTAT 54779 29 96.6 32 .........................C... TCGGTGCCGATGCCTGCACCGCCACCTTCTTC 54718 28 86.2 31 ........-..A.A..A............ CGGAAGCGCTGGCGTTCATGCTGGACATGCA 54659 29 89.7 32 ............T...........AC... TGAGAAGCGTCCGCTGTCAACCCTGCTCAGTC 54598 29 93.1 32 .............A............G.. CGCCAGGTGAAGGTGTGGCCGACGGCCATACC 54537 29 96.6 32 ............T................ GCCGGGCCGATCGCGTTGTTCCACAGCCACAT 54476 29 96.6 32 ..............C.............. TCACCACCGCCTATCAGTAGGCGGTGCCTTGA 54415 29 75.9 0 .....T........C..A....C.AC..T | ========== ====== ====== ====== ============================= ================================ ================== 14 29 94.1 32 GTGGTCCCCGCGCGTGCGGGGCTGTTCCC # Left flank : TCCCTGGACGCTGTCATGGATGTACGGCAGGGCCC # Right flank : TGCGTGCAAGCTCATGGCGCTTCCCGCACGTCGAGCGGGACTTCTTGAGTAGTACAGCCGGCCAGGTGTGGGAGGCCAGCTTCCGAGGACCCCCTGTGGAGGTGGTGAGCCCGCCCTACCTCGGTTGCTGCGGCTTCTCCGCGAGACTCGTTGCTCTACTTTGCCGTCTACCAAGCAGGTGGCCGGGGTCGCCCGTGGGGCCGATGGACCTGCACCCGAGCCGTCCCTGCATCACGCGCGGTGGAACTTTCGACCCGGGCCCCCTGCGTCGGGGCGGCGGCGTTCGCGGGGGTCGAGTCGGGCTTCCAGCGGTGTGCGGGACAGGTACCGAAAACGCCACGGCTCTCCGGGCGGTGTCACCCTTCAGGTGCGCGCGGAGGAGCGCGTGCTCCGATGGCGCCAGGAAGATCTTCTCGTCCTTGGCCTCATGCGCCCTCGGCCGGCGGGCGCGGGCATCCGTTGTGCGATATCGGGCCCGCGGGGTGGAGTCGGACGTCCCC # Questionable array : NO Score: 5.50 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:-0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGCTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGCTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.70,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.01,4.91 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], // Array 1 11379-11044 **** Predicted by CRISPRDetect 2.4 *** >NZ_KL571112.1 Streptomyces monomycini strain NRRL B-24309 P063_Doro1_scaffold71, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 11378 29 100.0 32 ............................. CCGCCGCGAGCCCGCCCGCGCTGCCCCGCAAC 11317 29 96.6 32 ............................T CGATTCACCGGCCGGCGGACCGACGCGGGTGA 11256 29 100.0 32 ............................. GTGGGCATGGGTGCGGTCGCCCTGCTGATCGT 11195 29 100.0 32 ............................. GGGAGGTGGTCTTCATCCCCAGTCGACGACCT A [11175] 11133 29 89.7 32 ...G.......A.............C... ATCGGCAAGCTCCGGCGAAGCTGCTTGCTCGC 11072 29 82.8 0 ...G........T.........C.CC... | ========== ====== ====== ====== ============================= ================================ ================== 6 29 94.9 32 GTGCTCCCCGCGGGTGCGGGGGTGGTCCC # Left flank : GTTCCTTTCTCGTCGGCGTACGGAGAAGAGGCGCGCTCACGCTACGGCCGCCACCCCCTGGACCACACCGGGCGCAACCGGCCAGCGAGGCGTTCGAATCGGCATCAGGTCACAGCACTGCTGAGCTGCTGACCATGTGGTTCACCCCGCAAGCACCCTCGAACACGAACGCCGCGCGGCACGTGGCCCCCTGACCGGTTCCGGCGGCGCTTCCCTCTCGCATCACGCTGGCCCCCATCAGGTACGCGGACGGCGCGAAAGACCCGCCCCGATATGGCCCTCAGCCACGGCTCGTGAGAGCGCTTCTCGGCTGGGCACTTCAACTGGCGCTGTTCTGAGACGACGACATCGGCGATGCGTGTCCACTACTGCCTGCAGGTAGTAGCGTGATCAGGTCACTCCAGGTCCGCCTCGAACGCGCCTTTTGGGAAGAGATGTCGGAGTTTCTAGAAGTGAGTAAAAAACCGCGCTCCGCTAGGTAAAGCCGCTGGTCGTGGCCT # Right flank : ATTTTGGTCGCGGCTGGGCTGGCGTGAGCTACGTGGTCCCCGGCGTGTGCGCGGAGACTACGGGTCCCGGCCGGTCGTCCACTGATGTCCATGGCACCTTTCCCGCGTGCCCGCAGCAACCGTGACAGCCCGAAGTGAACACCAGCGAAGCGTGCCTCTTGCCACTTACGGACTCAGCGTGGCCACACAAGCACCCTTGAGCGCAGCCCTCCATTGGCATGACACGACCTCCGCTCTTCGTCTACAGCCGAACTGAAGCAATCAGCGCAGCGACGCTTGTCGTAATCAACCTCAACGCGAGCGTCACGCCAGCAACGCCATCGGAACGACGGGCAAAGCAGCAGGCCAGCAAGGATGCAAGCCCTTCCGGGCCACGATCGACGCATAGGCAACTGAGAAGCTTTCGTTGTAACTCTGCCCGGGAAAAGGGGTGTTGATGCACAACGGCATTGCAGACTGCTAGCGTTCCTCCACCCAGCGCAGGGCTACACCCCGAGCGC # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGGGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGTGCGGGGCTGGTCCC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 8545-8695 **** Predicted by CRISPRDetect 2.4 *** >NZ_KL571106.1 Streptomyces monomycini strain NRRL B-24309 P063_Doro1_scaffold64, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 8545 29 100.0 32 ............................. GAGCAGCGGGAGACCCTGACCCGGGCCGGAGC 8606 29 100.0 32 ............................. CAGACCGAGGCGTCGTTGACGGCGTTGCCCAT 8667 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 100.0 32 GTCCGACCCGCACGCGCAGGTATCGACCG # Left flank : ACCCCCCTGCTCACCTGGTGCCAAGAAGGCTGCGCCATCCGCTACCGGCTCGACGCAGCCCCCCAACGCTCCCAGCCCTCCACCACAACCGACGCCAAAGGCCGCCGCCACCGCGGCAAGCTCTTGCCCCTGTACGGCGAGGAGGCCACCGCCTGGTGGCACCGCAAAGCCACCGAAGCCGGCCTCACCCTCGACCCCGACACCGTCCTTACCGCGAGCCAGCCCGCGATCTTCGGCCGCAAAAAACACCCGCACGAACCCGGCCGGATGCGCTTCCACATGCCGGTCACGCGCTTCGAAGGCCACGCCACCATCACCGACCCCGACGCCCTCCGCACAGCCATCACCACCGGAATAGGCCGAGCCCGCGCCTACGGAGCAGGACTCCTGTCCATCGCCCCCTCCCGGTAACCCCGGCGACCACGTCCACGTGCCAAACCCCCGACACGAACCTTGATAACGAAACAGCAAAGCCACCCAAGCACCGCAGGTCGCGAAGG # Right flank : GGGTCCGTTGACCGACGGTTCGCGGCTGCGGCTGTCCGACCCGCACGCGCAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCAGGTATCAACCGCCGGTGGGCGAGGACGCCGACGGCAACCCGCAGTCCGACCCGCACGCGCAGGTATCGACCGACCGCCGAGACCGACCGCACGGTGGCCGTGGCGTCCGACCCGCACGCGCAGGTATCGACCGCATGGGTTTCTCCTGTGTGTAGTGGTGT # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGACCCGCACGCGCAGGTATCGACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCGACCCGCACGCGCAGGTATCGACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.60,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [41.7-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 9077-9288 **** Predicted by CRISPRDetect 2.4 *** >NZ_KL571106.1 Streptomyces monomycini strain NRRL B-24309 P063_Doro1_scaffold64, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 9077 29 100.0 32 ............................. ACCGCCGAGACCGACCGCACGGTGGCCGTGGC 9138 29 100.0 32 ............................. CATGGGTTTCTCCTGTGTGTAGTGGTGTGGTT 9199 29 100.0 32 ............................. AACCGTGCCCGGGCGATGACCGCCACCAGGCC 9260 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 100.0 32 GTCCGACCCGCACGCGCAGGTATCGACCG # Left flank : CAGCGGGAGACCCTGACCCGGGCCGGAGCGTCCGACCCGCACGCGCAGGTATCGACCGCAGACCGAGGCGTCGTTGACGGCGTTGCCCATGTCCGACCCGCACGCGCAGGTATCGACCGGGTCCGTTGACCGACGGTTCGCGGCTGCGGCTGTCCGACCCGCACGCGCAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCAGGTATCAACCGCCGGTGGGCGAGGACGCCGACGGCAACCCGCA # Right flank : GCGGTGGGCCTGGCCGTGGATGACGTTGGCCAGGTCCGACCCGCACGCGCAGGTATCAACCGGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCGCACGCGCAGGTATCAACCGGTGGCT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGACCCGCACGCGCAGGTATCGACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCGACCCGCACGCGCAGGTATCGACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.60,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [21.7-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 9814-10086 **** Predicted by CRISPRDetect 2.4 *** >NZ_KL571106.1 Streptomyces monomycini strain NRRL B-24309 P063_Doro1_scaffold64, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 9814 29 100.0 32 ............................. CCCCGGGGCCTCAACAACCACGAAGACAACCC 9875 29 100.0 32 ............................. CGTGACGCCCTGGGCAAGGTCGACGACGCGCG 9936 29 100.0 32 ............................. GAAATGGACGAGATCCACAACGCCAGATGCTC 9997 29 100.0 32 ............................. ACCGGTGAGGTGGTCTCCCGCCGGCGGGAGGT 10058 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 100.0 32 GTCCGACCCGCACGCGCAGGTATCAACCG # Left flank : TGGCCAGGTCCGACCCGCACGCGCAGGTATCAACCGGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCGCACGCGCAGGTATCAACCGGTGGCTGGGGGCTCCACGATCCTGCGGTGGTC # Right flank : GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATCAACCGGCGGCGTTCTCCCTCAGTGCGGCCGGCGCCTGGTCCGACCCGCACGCGCAGGTATCAACCGCTGGACTGGATC # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGACCCGCACGCGCAGGTATCAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCGACCCGCACGCGCAGGTATCAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.60,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [26.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 12529-12983 **** Predicted by CRISPRDetect 2.4 *** >NZ_KL571106.1 Streptomyces monomycini strain NRRL B-24309 P063_Doro1_scaffold64, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 12529 29 100.0 32 ............................. TCAGACGGCACGCTGGTCGTGGCTACCCAGGC 12590 29 93.1 32 .C........T.................. ACCCGGCGCATCAGCATCCCGCGCGCCCGCCG 12651 29 93.1 32 .........T...A............... TGATCGCCGATGCGGTGTCCGACGTACAGGGC 12712 29 96.6 32 .............T............... CAGGGGACATCGCCCTTCACGCCGTCTCCGCA 12773 29 93.1 32 ........T.............C...... GTGACTGCTCCGCGGCGGGTGGCGTAGATGCC 12834 29 93.1 31 .........................GT.. GCCGAGCTGGAGGCCGTGGGTATCCCCTGGC 12894 29 93.1 32 .......T.....A............... ATGGCGGTGACCGGGCAGTCGAAGTACATCGG 12955 29 86.2 0 T....................G...G..A | ========== ====== ====== ====== ============================= ================================ ================== 8 29 93.5 32 GTCCGACCCGCACGCGCAGGTATCAACCG # Left flank : ATGTCCTCCATCTCGTCCGACCCGCACGCGCAGGTATCAACCACTCGACGGCATCGTCTCCGCCGGCGGTGCCCAGCCCGACCCGCACGCGCAGGTATCAACCGGCCCTCCCGGTCGCTGAGATTCCCGGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCGCACGCGCAGGTATCAACCGGCCCTCCCGGTCGCTGAGATTCCCGGCATCAG # Right flank : AGTCCATGAGACTCACCGGGCCCGACCCGCACATGCGGCGCCATCCGCCTTCCTCTACGCCGACGTAGCGGCTCCCTGACCGCACGCATGGGCGTCTGCTTACACAAATTGCAACTATTCACCGTCAACGTTCGCAAGAACGGTTCGGCTTCGTTCGGAGGTTTTATGCCTGACAGTTTCACCCCAGACCAAGACGTATGGGGAAAGTGGGACGGCCTCCTCTTTCCTTACCCCTTGGGCTGCCACTTCCTCGACACTGCCGCAATAGCAGGGGAACTTTGGGACACCTACCTCACGGAACAGCAACGTGCTGCCACCGCCGATGCCTTCGGTGTATCGGTGGCGGATGCTCGCGGGATGGTCTGCTTCTGGGCAGGGTTGCACGATCTAGGTAAGTGCTGTCCCTCGTTTCAGGGTCAGCCGTCGGGCCCTGATCCGGCATTCCTCAAAGAGCCGGATTTCGCCGCTCCTTCCGGTTGGATGTTTGAGGGGGCGGTGCG # Questionable array : NO Score: 3.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGACCCGCACGCGCAGGTATCAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCGACCCGCACGCGCAGGTATCAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //