Array 1 72350-71060 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANRV01000020.1 Neisseria meningitidis 63049 NM63049.contig.19, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 72349 36 94.4 30 ........G...A....................... TTTTTGTATCCATTCCCAGCCGGAAATTAA 72283 36 100.0 30 .................................... CTTCTGCCTTTTTACAAGCTCGCTTTCTTT 72217 36 100.0 30 .................................... TTTGGTAAAGGTTTCTGTTGCGACCCGAAT 72151 36 100.0 30 .................................... CTTTAACTTTGACCGTGTGCAATCCAGTTA 72085 36 100.0 30 .................................... AACGGCAACCCACTAAATTTTGCAAATGCG 72019 36 100.0 30 .................................... ATGCCTTTTTTTGTACTGTTGTTTGAACGA 71953 36 100.0 30 .................................... AAATTCGTTTCAGATAGCAAACGCAGTAGT 71887 36 100.0 30 .................................... GCCGGATATGACGGTGGGCAACTGGTACAG 71821 36 100.0 30 .................................... ATTTCGCTTTTGTATTGATTCAAGGTGCTT 71755 36 100.0 30 .................................... AGTATTCGTCGATGATGGAAACTCGAGCAT 71689 36 100.0 30 .................................... GGGTAGCCAGTGCTAAAACCGCACCCGCTT 71623 36 100.0 30 .................................... ATGATGCAGGCTGCTCCGTCATCGTCTGCA 71557 36 100.0 30 .................................... CCAAATAGAAATACATACGCCGAGTAATTA 71491 36 100.0 30 .................................... TTTCTTTTTGTAATTGTTCTGCCTTTTTTA 71425 36 100.0 30 .................................... CAATAACGGCGAGTTTACGCATCAATGCGG 71359 36 100.0 30 .................................... TACCCACGGCGGAAACCATTGCCACAAAAC 71293 36 100.0 30 .................................... TTAAAATAATAACCCAATACACGATGTTAA 71227 36 100.0 30 .................................... TCCTGCCAATTATCATACATAAGATTTTGC 71161 36 100.0 30 .................................... TTGCGTCTATGGTGTCCTTTGAGATGTCCA 71095 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 20 36 99.7 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTCTGGCAATCATGGCTTGGGCGGTTTGTTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //