Array 1 10665-15245 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRKB01000026.1 Prevotella copri strain AM16-54 AM16-54.Scaf26, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 10665 30 100.0 35 .............................. GGAACGGTGGGCATCAAGTTAAACCAAAATATTAA 10730 30 100.0 34 .............................. TGGTGAAGAACACCAGAATAACGCATTCCTACCT 10794 30 100.0 34 .............................. CAGGTTCAGTTATCGGTTGTTATTTCCATTACAA 10858 30 100.0 36 .............................. TAGGTCACGGATAAATCGATCGGGTTTTTGGAAATA 10924 30 100.0 36 .............................. AGATCAACGTAAGAAATATAAGGAAGGGAAGTAGAA 10990 30 100.0 36 .............................. AGATACGAAGTCAAAACGTAACTTAAGACATTCATA 11056 30 100.0 34 .............................. CTAGGTGGAGGAGTAGGCGAACCAGAACCACTAG 11120 30 100.0 34 .............................. TATTGAGCACGTGGCAGAACTGATGTAAAATAAT 11184 30 100.0 35 .............................. AGATACCGGAGAAGTAGTCATTGAAGAAATGACAA 11249 30 100.0 34 .............................. AAATTTGGAAAATGACAAGTTATTTGCTTATGAA 11313 30 100.0 35 .............................. CGCTCAAAGATTTTATCAGTATCATAACTATCAAC 11378 30 100.0 35 .............................. ATATGACTTGTACGCGATGGCTTCTAAGTTTTTGG 11443 30 100.0 35 .............................. AACTATCTTATTTAAATGCTTTTTCATATCTTATA 11508 30 100.0 35 .............................. ATTTTCGTGAAACAAAAAGCAAGAGAAAACGAAAA 11573 30 100.0 35 .............................. TACTCCAAGGTGAATGAATTCTCTTCATCTTTTCC 11638 30 100.0 36 .............................. GCGTTGAAACATTCTAAGGTGAGTAGTGAAAAGTTA 11704 30 100.0 34 .............................. CAAATTAGTAACTTAAAAATTTAAAGCGATATGA 11768 30 100.0 36 .............................. GAATTAGATAGCATTGGTATGCAAACGCAATTTCGT 11834 30 100.0 34 .............................. TTAAATGTGTAACTTTTAAAATTGGATATATGAG 11898 30 100.0 35 .............................. GAAGTAAAGCTTGGTGGCAACCCTCCTAGTGGCAA 11963 30 100.0 35 .............................. TATTCTAAGTAATTTAAATTTTTCTTGTTATGAAA 12028 30 100.0 34 .............................. TCCGATTTACGGGCTCTTCCTGTTTTAATGTTGC 12092 30 100.0 36 .............................. TTCGCATCGTCACATGTTTACTGCGCAAGTTGGTGG 12158 30 100.0 36 .............................. ATGATTGATACTTCAAATTTCCGTGCTCAGTTTGAA 12224 30 100.0 37 .............................. CTAGTAAGTGAACCGTAATATTTACCTAGTTGCTTAA 12291 30 100.0 35 .............................. AGGCAGTACATTTATTCAAACGAAAAGGAGTACCG 12356 30 100.0 37 .............................. CAACTTAACTTCGTTAAGGAATCAGACAAGAAAAAGG 12423 30 100.0 35 .............................. TACGATCAGCTATTCTGGAACCATACCGCTCTGAT 12488 30 100.0 34 .............................. TTGTCTATAAAGATAATGGTCATTACAAATCTTA 12552 30 100.0 36 .............................. TAATGTTAGAACGATTAGCCATAATTTTACAAATTA 12618 30 100.0 34 .............................. ATTTTAAGGAATAAGCGTAATAATTTTGATGTTT 12682 30 100.0 35 .............................. AACAGCAAATAATCGATAGTATGCAGGAAGTTCTA 12747 30 100.0 35 .............................. AGGCTCTGCGAAGCAGTGCCTAGACACCGCTTTTT 12812 30 100.0 35 .............................. CTCGAACAGAAAAGATAATATACAACAGACTAGTT 12877 30 100.0 34 .............................. TACAACTGGTGGTACTGCTCTTACTAAGGCTGCT 12941 30 100.0 35 .............................. CTTTATGAATATATCCGCACAAGAGCGGATGGAGT 13006 30 100.0 34 .............................. GGAGATACTATCAATTTGGATGCCTCTTACTTTA 13070 30 100.0 34 .............................. CTGATTTCGTTATTCCTGAGTTAGACTCTATTGG 13134 30 100.0 37 .............................. CTCAGAAAAAACGATGGACGAATACCCCCTGAGCATA 13201 30 100.0 37 .............................. GCAGAACCACCATCCATCATAAGATAGGGATTTAAAC 13268 30 100.0 34 .............................. TGGGGAAATGGATATGATAAGAAAAAATTTAATT 13332 30 100.0 36 .............................. TATGTAGCCTTATTATCACCTGAAAGATTTTGATTA 13398 30 100.0 34 .............................. AACGAATCGAGGTAGAATTGTCGCTCAAAAAACG 13462 30 100.0 34 .............................. AATATGGGCGCGGTCGGCAGCACCCCTTTAACAT 13526 30 100.0 34 .............................. ATCGGGCGGAATACTCCGGCATTTTTCAATAGGG 13590 30 100.0 34 .............................. CTGGGACATCTGGCACGAAGGCAGTACTTTTGAA 13654 30 100.0 37 .............................. GACTGTCGTTTGCGACTTGAAGACCTCGGGCAAGGAG 13721 30 100.0 34 .............................. AAGTCGGGGAGTTGAAGGCACGTTTCGACAGTCC 13785 30 100.0 33 .............................. ACAGCAAGAAAGTAAAGGATAGTTTGGTTAGAC 13848 30 93.3 36 TA............................ TTCATAGAACAGTTCAAGGAACACCTCGCCCCCATC 13914 30 100.0 35 .............................. TGGTAACAAAAAGTTGTTTATGGTTGTGTCCGGGC 13979 30 100.0 34 .............................. ATTGGAGAAGAGTTGCAACATCAGACTGTTGACA 14043 30 100.0 36 .............................. GGAGAAGGATGAAGAGGAAAACGAAGAGATTGCCGG 14109 30 100.0 35 .............................. GTACAATTCCGGATTTGTTTCCTCCAGGGAGGCGA 14174 30 100.0 35 .............................. CTTGAAAAGCTAAAGAGAAAACTTGAAAAAGAATC 14239 30 100.0 35 .............................. CACGATGCAGGTAATCCTCGAGAATAAGGACGAGA 14304 30 100.0 35 .............................. CGCTCAGGAAGACGAGTTGAGAAAGCAGAGACAAG 14369 30 100.0 36 .............................. TACGGAAGATATACAACAGGTTGGGCTGAACAGCTA 14435 30 100.0 36 .............................. TTTTGCGCATATAGAAGCTGCTGCTGTCCTCCTGGA 14501 30 100.0 35 .............................. GGCGATATCCTGTGCCACAACATTGAGGACTATGA 14566 30 100.0 35 .............................. GACAACACTCACAATGCCTACATGGATAGAGGAAC 14631 30 100.0 35 .............................. TTGGGGGCGATGTTCAAGTTATAACGTTTAAATTA 14696 30 100.0 35 .............................. GATTTTAAGATATTCTGCTTACCTTAATCACCCTT 14761 30 100.0 36 .............................. AATCATCAAGCCTTTTCATAAAATATGCTTTATTAG 14827 30 100.0 35 .............................. AAGTACCGTCCATTCAAGGACGCAGAAGAGTGCTG 14892 30 100.0 37 .............................. GACGAAAGATTACCATTGCCTGCTTGCGTGCCTGCTG 14959 30 100.0 35 .............................. AACACAAAGTTGAGAAAGAAAACCAAAGCCAATGT 15024 30 100.0 34 .............................. TCTAATACAGAAGTAGTCTTTAGTACTATCTTAT 15088 30 96.7 33 ............................C. CATCAATCTGAGACTTGTAAAGACCGAACTCAG 15151 30 100.0 36 .............................. TAGTCACTCTCGGTAGCATTGATTGTAATAACGTTA 15217 29 93.3 0 .........................-..T. | ========== ====== ====== ====== ============================== ===================================== ================== 71 30 99.8 35 GTTCTAATTGTACCTTTATGGAATTGAAAT # Left flank : CCTTTTAAAATGTATTGGTGATATGTATGTGATTATAGTTTATGATGTTGGTGAGAAGCGAGTAGGCAAAATGTTGAAACTTTGCCGCCAATATTTGTGTTGGATTCAGAACTCAGTATTGGAAGGAGAATTATCTGAAGCTAAACTTCGGGAATTGCAAATGAAGATGAAAGCTATCATTGATGAATCCGAGGATAGTGTCATTGTTTTCACCAATAAAATGGGGTATAATATGAACAAACAGATTCTTGGAAAAGAAAGAATGTCTACCGATAATTTCTTATAAAGAGTTGTCGATGTGGTTCTATTTTTCCGTTTCTAGGTTCGGAAAAACCTCCAAAAGTGTTCTTTGACTTATTGAAACCTCCATAAATAGGCTGGTTGTCGTAAGGCCGCAGAAAAAATATCTTTAGGCATCGACATTTTTTCTGAAGATTTTTTGTATCTTTGCACCCACAAACCTATTGATTCTTCGAGCATCTATGCCTAAGGATTAACGG # Right flank : TCAGAAGTACTGATAGCTTTAGTATTATACCGCAATCTCTAGTTATAAGTGTTCAGAATGTGTCTCCTCCAGCCACAGCATTCGTCTCCTCCGGTCACTGCATTCGACTCCTTCAGCTATCGCATTCGTCTCCTCCGGTCACTGCATTCGACTCCTTCAGCTATCGCATTCGTCTCCTTCAGCCACTGCATTCGACTCCTTCAGCTAATGCAGCCGTCTCTTTCTGCCAACTCAGCCGTCTCTTTCTGCTAACTCAGTCGTCTCCTTCAGCTAACTCAGTCGTCTCCTTCAGCCATCGCAGCCGTATGTGTCAACTCAATGAAGTAGATGAACTCGTGAAATGAAGTGGATGAAGTTGTGAAATGAAGTACATGAAGTCGTGAAATGAAGTGGATGAGTTCGCATAATGAAGTTCATGATTTCTGCATAATAATTAATACATGCGAATGGTAAAGCAAAAAGTGGTACTGTTTTTCTATTCTTATTGCCACATCTATCAC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTAATTGTACCTTTATGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //