Array 1 61442-59092 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMIO01000020.1 Actinomyces sp. Z3 Scaffold20, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 61441 29 96.6 33 ............................C AGGTCACCTCTCTGTCCACCACGGTAACCGGCC 61379 29 96.6 32 ............................T CTGTTAGAACTCGGGGGCGGTGTAGTAGGAGG 61318 29 100.0 32 ............................. GAGGAAGGGGGCGTAGCGCCGTGGCGTATACA 61257 29 100.0 32 ............................. TCTTGGGCGGATCTCTGCACCGACGTCCTGAT 61196 29 100.0 32 ............................. GCGGCGTTCGCGGCGTTGCGTGGGCGCGCGAA 61135 29 100.0 32 ............................. GCGTGTTCGTCTTTGCCGCGTACCAGCGCCCG 61074 29 100.0 33 ............................. GAACAAATAACCAAGGCGGTAACAACATGCCAC 61012 29 100.0 32 ............................. CGAACGACTTGATTCCGTTCCAGATGTTCGTG 60951 29 96.6 32 ............................C GTTCGAGCGTATTGGCGCGCCTACGGCGGTTT 60890 29 96.6 32 ............................C GCCGCCCGACCAATGGGCCTCGAAGGAAGCCG 60829 29 96.6 33 ............................C CAACGCCGCGGCCCGCTGATAAATAGCCGACGC 60767 29 96.6 32 ............................C TCTAAGGGGCGGACGTCCGTCTACCTCGCCTC 60706 29 96.6 32 ............................T GGCAATGGAACCGCGTTTGCAGGCATGCGAGC 60645 29 96.6 32 ............................T CAATAGTTGGCGCACTACCAGCGCCACGAACA 60584 29 96.6 32 ............................C GTAGCCGGTAATCTGGCCGCTTTCGGTGCACT 60523 29 96.6 31 ............................T AGATGCTGCACCCATTGGGTATGTGTTGGGC 60463 29 96.6 32 ............................T GTGTCTCCCCGGCTCGGGATTGACGCTTACTC 60402 29 96.6 32 ............................C GGGCCTCGTCTTCAACGGCGTACTCCTCTACG 60341 29 96.6 32 ............................C GGCCGCCGCACACACATACGGAACATCGACAC 60280 29 96.6 31 ............................C GATTAGGGTTCCTTTCGTCCGCCGCCGATGA 60220 29 96.6 32 ............................C TCCATTGCTGTGGATGTCGGGCGTGGTGCAGA 60159 29 100.0 32 ............................. TATTCCAGTTCTGGAGCGCTAACGCGCATCGC 60098 29 96.6 32 ............................T GGGAGACGGGGCCAAGAGCGAAATACGGATGC 60037 29 100.0 32 ............................. TTGAAGCTAACCTCCCCGTAATTGTTGACGAT 59976 29 100.0 32 ............................. ACGGCAGCGTGTCTGTTCGCACGATTGACGCC 59915 29 100.0 32 ............................. ATGAGCGTCGATATTCTTGCCGAGGTGGTGCG 59854 29 100.0 32 ............................. TACAGCGGCCTATGGTTGAGGGCGTGCTCTTT 59793 29 100.0 32 ............................. TAGAGCCTCATGCCGCCTCACCCACCCGCATT 59732 29 96.6 33 ............................A GTCGGGGTCGGTCAGCGCCCGCTCTACGGCGGC 59670 29 96.6 32 ............................C CAAAATATTGAGACCTACACGCGTCAGGGCTG 59609 29 100.0 32 ............................. GACACTACATGCTCCAGCGCCTGATCACCGAG 59548 29 100.0 32 ............................. GGGGCCTGCATCGCTGCCCTGGACGCTGGGGA 59487 29 96.6 32 ............................C CAGTCACCGGTCTTTACATAGGGGGTGCCGCC 59426 29 100.0 32 ............................. GCGTCCCCAACCTCGGCGGCGTCGAAACCTGG 59365 29 100.0 32 ............................. TAACCATCTCCCTCGCCGACGGCGTATGGACA 59304 29 96.6 32 ............................T GCCCGGAACTCCTCCTGCATGGGCACGGGTGC 59243 29 100.0 33 ............................. GGACGGCACCACCAACACCGAGATTGTCGGCAC 59181 29 96.6 32 ............................C TTCTGGGACCACGGCCGGGCGACGCAGATCGG 59120 29 93.1 0 ..G.........................C | ========== ====== ====== ====== ============================= ================================= ================== 39 29 98.0 32 GTCGACCCCGCGCGAGCGGGGATGATCCG # Left flank : GCGGCGACTAGTTGCAGGTGGCGCGAACTATTCGGAAGAGGATGCAGGCGGATGGTAGTGCTGATTCTTTCGGCCTCACCCGCATCACTACGGGGCGCCATAACGCGCTGGCTGCTCGAGGTGAGCCCGGGTGTGTTCGTCGGGCATCTGTCCGCCCGGGTGCGCGAACAGTTGTGGGAGCTCGTCAGGGCGTACATCGGCGATGGTCGGGCACTGCTCATCTGGTCTGCACGCTCCGAGCAGCACTTCGAGATCGCCTCCCTCGGTCACGACCGCGATCCGGTCGATATTGAGGGCTGCATCGTGATGCGCACACCGTATCGGCAGATCGAAGGGGCCAAGTCGATTCCCGGCGCGATAAAGCCCGCCAAGGAATCATGGTCGATTGCAGCCCGACGCCGCCGCTTCCGCAATTCGACGGAGCGGGCACTAGGTCAGCAGTAAAGGAATCACGTGTAGTGTTTGCTGCAGCGCCGTTGGGATTCCAAGGATCCGCAAGT # Right flank : ACGGCCCAAGTTGAGCTTTCTATGACCTCACTGAACAACGTCGACACCGATGGCAAGCCGAAGCGTTGCTTCACGACGCCCCGAGTGAACGCACCTGACCGGGCGGCATGTCGGCGTCCTCACGCCACACTACGAGCATCGGCTGCTCCTGGTCGGCGGCCGCTACCACGATGGCATCCACGACGTCTCGTGTATACGCCCCCAACTGGTTGACCTCCGCTGTCACCCCAGGCGGCGGCGTGCACCCGCCCTTCTCCCATGTTTGGACCGTGCCCTCGGGTACTGCCAAAAGCTCAGCCATGTGCAGGCACAAAGCCCTTTCCACCTAATCCGTGCGAACGAAGGCGGCTCGCATGGGCGTCAGAAACGCATAGGCAGAGGCGAGTTGGCCTGCCCGCAGCGCGTCACGCGCCAAGTGGGGGCTGGCTCTCGCCTCTGTTCGGGCGAGTCTATTCCACATCCCCCACACGCACACCATCATGACCAGCTCAGTATGCTCA # Questionable array : NO Score: 5.78 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.62, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGACCCCGCGCGAGCGGGGATGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGAGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 126206-127049 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMIO01000003.1 Actinomyces sp. Z3 Scaffold3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 126206 37 100.0 35 ..................................... GAGGAACTCGACCTCACGTGGCTTGAGGTTTAGGC 126278 37 100.0 35 ..................................... CGGCGGATGAAGGCCTCGACGGGGATCGCTTGCGA 126350 37 100.0 35 ..................................... GAGGCGGCGAGCACGTCGTCGATGCCGATGCGCTC 126422 37 100.0 37 ..................................... CATCATCGTAGATGCGGGCGACCTGGTCGAAGCCCTC 126496 37 100.0 35 ..................................... GTTCACCTTGTTCCAGTAGATGGGCATGATCGCTA 126568 37 100.0 38 ..................................... CCACCTTCTCCCGGAGAGTCTCTCCCACATAGCGGCGG 126643 37 100.0 36 ..................................... CGGAGGCGCGGCGCGGTCAAGTCGGCGGATTCGGAT 126716 37 100.0 36 ..................................... TTCACATGCATCAACCGCCGCATTGGTGATTGTGAT 126789 37 100.0 37 ..................................... TCTGGCGGATGGCGGACTCGATGCGATCAATTGTAAC 126863 37 100.0 37 ..................................... GCCGGCCAGCCCAGGACAACAGCGCTCCCGTCATCAA 126937 37 94.6 39 ...........T.........C............... GCAACCGGGATTGGGCCGGCGTAGTGGTTATCGTCGCCT 127013 37 89.2 0 .....................C..........C..GT | ========== ====== ====== ====== ===================================== ======================================= ================== 12 37 98.6 36 GTCAGGAAGCACCTCGCACCTTAAGGTGCATTAAGAC # Left flank : TGTGTGCTGCGGCGGTACGACCAGGTGTTCCGCAACGGGAACATCTTGGCACCGATTGCGCCGGTGCGGGGCGGTGTTGGAAGGGGCGGTGTCTGAGTAGAAGGTGCAATTGCGTGGGGCGGATATTGGTTGGCGGCTGGTATTTGTCACCCGGAGTTTGAGGGAGTCGCGGGTGGGGTAGGTGCGCTGGGGAGCGGGGGCGGTTGCGGGTGTGGTGTGTGGTGCGGTTGGGATGTGTGGGGTTGGTGTGGTGCTCGCCAGATGGTCACAATTCGGTCTACGGTACAAAGATTGGTGCATTTTGATCCTGACTTTTCCGCATGACTTCGTTGAAAGTTGGTGGCTGGAGGGGGTTGGAGGGGTGTCGGTGGCGCTTGGCTTGTTTTCAACGAAAGGTGGTAGTTTTGGCCTGGTGCCAGTCGGTCTCGTGGGGTGCTTGCGGGGTCGGTGGCGATCTCGCCTCTGGAAGTGGCGGTATGACGCGGTTTCCAGGGGTAGGG # Right flank : TCCTCGGGGAGGGTGACCTGTGCGACGGACGCCGTGGGCATGGTGTCAAAATCGATGACAAACGCCTCCCACACGCGCCAACCCTGATCCCAAGACCGCATGATTCCAGCGATTTGTCCGCAGTTGACGACGTCGCCAGCCTCGTTTGTCATAGATCCGGACACCCTCGGCCGCTGCCCGGCGGAATCAATGGCAACGGCGAGCCGCCGTCGTACCGCCCGAACGCCCAACCAACTCGCGTTGGCGGCGCTACCACCAGTGTGGGTTGGGCCACCGCTCAACGAAGAGACAAAGGCAATGGACTCAGACTCGGATACACCGCCATCTTCGTCTCACGGTGACGCGCGCTCGTCGGAGGAATCAGCACGCACCGCCGGCGGCAGGCTCCCAGACAGCACCATCGCCTACGTGTGTAGCCTTTATCCCGAATCCGGACACTTTTCAGTCCTCTGCCCACCGGGATGTGCGGCAGCGATTGCCTCTGCCGGTCGAAGTACCCG # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGGAAGCACCTCGCACCTTAAGGTGCATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 19786-19158 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMIO01000048.1 Actinomyces sp. Z3 Scaffold48, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 19785 37 100.0 38 ..................................... CCCCTGCGGTTCGCGCGGCGGCGAGCGTCCCGGTTGGC 19710 37 100.0 36 ..................................... CCTCCAGGTAGCCCTTGGCGAGCAGCGACAGCTCCC 19637 37 100.0 37 ..................................... CATGCCGGTAATCGTCTCGCGATTCACGACGCGGCTC 19563 37 100.0 37 ..................................... GCGTAAATGGCGGTGACAACGATCAGGGCGATGATGA 19489 37 100.0 37 ..................................... GCACGGGTGGCGGCCTGTGCCTTGGTGAAGCACTCGA 19415 37 100.0 37 ..................................... ACGCCCAGTACGAGGCGGAAGTGCACGCTATGTATTC 19341 37 100.0 37 ..................................... ATGCGTAAGTGGTTTTGGGTAATCCAAGGGGGTCCTC 19267 37 97.3 36 ....A................................ CCGTCTTCCAAATAATCGGACGAGTTTACGACGTCG 19194 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 9 37 99.7 37 GTCAGGAAGCACCTCGCACCTCAAGGTGCATTAAGAC # Left flank : GCGGGGTCGGTGGCGATCTCGCCTCTGGAAGTGGCGGTATGACGCGGTTTCCAGGGGTAGG # Right flank : TTTGTCAGGCATGGTCTCGGCGTCGAGGTTGTAGGGCGCTTCGCGTTCGAGGGTGTGGATGAAGCCGGGAGTCGGTTCGCCCGCGTGCTTAGCGCTGACATCGTCTACTACACCGGTTAGGTGTTTGCTTAAGGGTTCTGGGCCCTCCGGCGGAGGTCTAACGACGTAGCAGACGCCGAAGGGGCGCAGCAGAGGCCGAAGGGGCGTACCCAATGATCGGGCCCTGGCCTCAATCCCACTCGCTCTACGTCCGCGACGCCGCCCCACCTCGGATGCTCGCACCGCCAACCTCCATGCCCCCTGCGAAGAAGCGGTTCATCGTCGGGCATACAGGCTCCTCGCGCTCGGGGACGTGGCGGGCCGGGAGTGGTGGCTGGCCGGGTGGTGGTGGGCGCGCGTACCCCAGTGGCGCACTACGCGGCGCGATGGACGGGAGTTGGGCCGGGGTGTCCGCTGAACCACGGCGGGCCAGGCACGATAGCTCCTGCGTTCGGGTCAAC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGGAAGCACCTCGCACCTCAAGGTGCATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.60,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 13394-11199 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMIO01000035.1 Actinomyces sp. Z3 Scaffold35, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================================================================================== ================== 13393 36 100.0 38 .................................... ATCGCCGGACGTGTCCACGACTGGACCATGGCGATGAT 13319 36 100.0 37 .................................... CCTCACGCACTTTCCGACACTCACCCGCGTCAGCATG 13246 36 100.0 37 .................................... ACGCACACGTCCGCCCCGTACATGGGTGTGTCCCGCG 13173 36 100.0 35 .................................... CTCACCAGCGCGCGAGGACCACGGTGCGGTCGGGT 13102 36 100.0 37 .................................... GTGGCCGAGGCCGTCCGCCCGGCGTCCCCGGAGCGCA 13029 36 100.0 36 .................................... ACGGGTATGCGCACGACGCCCTGGCTGTACCCCTGC 12957 36 100.0 37 .................................... CGGCCCGGCCTGCCCCGGGTCAAGCCGGGCCGGTAAC 12884 36 100.0 37 .................................... AAGAGGTCGGGGTTGGCTGTGATTTCCTCGAGCGCGT 12811 36 100.0 34 .................................... GGTTGGATACCCGCCCAACCAACCTAGCCACAAG 12741 36 100.0 35 .................................... GACGCGCCCGTGTCCAAACCTTCGGGGCGCGCAAG 12670 36 100.0 36 .................................... ACGCTCCCCAAGCACACCCGCAACCACTAACCACTA 12598 36 100.0 35 .................................... TGGTCGAGCAGCCGGGACCACCACAGGTCCGACCC 12527 36 100.0 35 .................................... TCGAGACGTTGTCAACACTCCTTCCCGGCCCCACT 12456 36 100.0 37 .................................... AAGCTGGACTTCCCCGGCGTCGAGCGCGTCTTCTACG 12383 36 100.0 35 .................................... TGGCGGATCGCGCACGAGTACTTGCCCTCGTTCCA 12312 36 100.0 35 .................................... AACGAGGCGTTGGGGATGACCGTCAATCAGTTGCT 12241 36 100.0 36 .................................... ACCGTGGTACGCACTAAGGCAAGTGTTCCCCGCCCG 12169 36 100.0 36 .................................... ATCGGCACCAACACACGGCTGACCACGACCGAACTC 12097 36 100.0 36 .................................... TCTTGAGGGGCGCGTCCGGGCGGGCACGCGAACGTC 12025 36 100.0 35 .................................... GCAAAGACGTCGACTGGCGGCAGTTGGTGCCACCG 11954 36 97.2 36 ........T........................... CTCGCCGACCTGCATGATCGCGTCGTCGTCGAAGTA 11882 36 97.2 36 ........T........................... CTCGCCGACCTGCATGATCGCGTCGTCGTCGAAGTA 11810 36 100.0 35 .................................... TTCGAGCGTGGTCGTCTAACCTGTCCGTAGCTATT 11739 36 100.0 37 .................................... GCGTCGATCCTCTCCTTAGTCGAAGCGGCAGTGACTT 11666 36 97.2 38 ..............T..................... GGGGACGGCACCAAGCCCTACCTGCGGCCCGACGGCAG 11592 36 100.0 35 .................................... GACCACCCGGACATGTGGCGGTACACCTCGCACAT 11521 36 91.7 35 ..............A...G.....G........... GGCGGCTGGCGACGGCCAACCCAGGGTGGCCTCGG 11450 36 94.4 37 .........TT......................... GCACTCCACCTCCTCGATGAGGCTGGATACCCCACCG 11377 36 83.3 107 ...............A....C...T.....C.C..T CATCTGCAGGTTGGATCGTTCGTCGGGGTTCGACGGGCTACAGTTTTCGTGGAGTCGCACTTCATTGAGGTACTGCGACGTGCTTTGCACCTCGTCGCTTCAACAAG 11234 36 88.9 0 .........T.....A..................CT | ========== ====== ====== ====== ==================================== =========================================================================================================== ================== 30 36 98.3 38 GTTGCAGTCCCTCCGGGGACTGCACTTCATTGAGGC # Left flank : CGATTCGCTGATGCGGGACGATGTTAGGCGGGTCCTGGTAGCTTATGATGTGCCGTCGGATAGACGCCGAAGCCGGGTTGCCAAGAAACTGCTCAAGTATGGCGATCGTATCCAGTACTCGGTCTTTGTTGTTGATGCTACTCCGGCGAAGCTTTTGCGGATGCGTGCCGAGCTCGACGAGGTCATCGATCCCGATGAGGATTCTGTGTTGCTGTGCGATGTAGGCCTGTTGGCCAGCGTTGACGCCGAGCGCTTTTCCTACATCGGTTTGACCCGGACGATCACGCCTGAGGGGCCGCTTGTCGCGTAGCCTGTGACTGGCGGCGAGCGCTCCGGTGGTCCGGATGAGCCCGGTAGCGCTCGCCGCCCTCAACGCCGCGTTTTGTGGCATTTCGGAGGACACACGGCTCGGTGTGGAGTGCGTCAAGGTGGTGCGTCCGGGACGAGCGCTCGCGATGTGGCTCCATAGTCGCGACGTGGTGGGCTAATCTATTGGTGCT # Right flank : GGGCGCTGACATCATGTCTCACAGACATGCATGTCGGCGCCCAGCCGAACGTTTCGGACCTCCGTCCCCCGCCTCGGCGTTTACGCGCGCCGCCGTCTACTCCGTGGGCGGCGGCGGGGCGGAGACGGGGCGGCCGTCGTTGGTCAGTTCGAGGACGCGCGCGTGGATGGAGGTGCGCCCCTGGAGCGCGGCGCGCAGGGCCCGGTGCAGACCGGTCTCCAGATACAACTCCCCGTTCCAGGCGACGACGTGGGCGAACAAATCACCGTAGAAGGTGGAGTCGTCGTCGAGCAGGCCGCGCAGGTCCAGCTGCGCCCGCGTGGTCACCAACTGGTCGAGCCGGATCTGACGAGGAGGGATGGCCGCCCAGTCGCGCTGCGCAGTGACCCCATGAGCGGGGTAGGGCGCACTGTCGCCGACGGCCTTGAAGATCACGAACCCATGCTAACGGGAACGTGTGACACACCGGGACACGGAACGGCATTCGGACAATCCCGCCC # Questionable array : NO Score: 2.96 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.20, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGTCCCTCCGGGGACTGCACTTCATTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.80,-10.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 52984-53959 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMIO01000005.1 Actinomyces sp. Z3 Scaffold5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 52984 36 77.8 37 ...C.G..CT.C......GCC............... CGACGACATCAAAGAGGATCTGCTTCCAGGCGGTGCC 53057 36 97.2 38 ........................A........... CACCGAGGACACATTCGCACAGACACCCAAGGCCGACT 53131 36 91.7 36 .T....................C.....A....... TGCTTCGCTGGACGGTACGGACTGTGAAGAGACATA 53203 36 97.2 36 ...................C................ CCGCAGGCTGAGACCGATCTTGGAGGCGATCGTGTC 53275 36 97.2 35 .........................A.......... ATTCGTCGGCTACCTCCTACAGCACTACCTCAATG 53346 36 100.0 37 .................................... GCAAGTGGGTCAAGGTCTGCTCACGGACCGCGGCATC 53419 36 100.0 37 .................................... CGGAGAGAGGCCGGATGTTCCACGCCGAACAAGAACT 53492 36 100.0 36 .................................... GGCGTCGGAGAACGCATGGGTCACCTTGGAGGAGTG 53564 36 100.0 36 .................................... ATGGGGAAGCGAGGTCCGCTGCCTAAGCGTTCCGAC 53636 36 100.0 36 .................................... CTCCGGCCTTGTTGGCGGCACTGACGGCAGACAGGT 53708 36 100.0 36 .................................... GTGGACTGAGGAGTGGGACGTTCACATTTCCGAGCT 53780 36 100.0 36 .................................... CACGGTCGCCACCACAGTGAAGGACTGGGCCGCGTC 53852 36 100.0 36 .................................... GGAGTACCAGCGACGCATCCCCGAAGCCACTAAGGG 53924 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 14 36 97.2 36 GCCTCAATGGAGCCCGGCCTTGAAGGCCGGGAAGAC # Left flank : CCTGCAACGAAGGTGACGTAGTACACGGGGCTCGGATTGGTGCCAGCACGGGCTAGCCGATAAAGTACCGACTCGGTGCGACGGCGTCGCCCCATGGTGGCTGTAGCTCAGTCGGTAGAGCGCCTGGTTGTGGTCCAGGAGGTCGCGAGTTCAAGCCTCGTCAGCCACCCCACTTCTTGCAGCCGCAGTGCTGCTGCAAAGCCCTGACCCTGGCGCTGCATTCCGAGCCGCCGTTTCCCGCAGCCGCACTACCGGGCCGTCGCTCACCCCCACTGCCCGCTCACGGCATCGGGCTGTCCAAATCCGGCATAAACAAGCCTTTAACGGCGATCGGCGTTCCCCCGACCCTTGAAATCTTGCGGTTTGGTCGCTCGGCAGTCGATGTCTCGCCATCGTTTATGCCGGATTTGGACATTCGTTCCGGCGATCCGGGCCCGAAGAAGACAGGACCCGGGCGCAGCGCGAGTGCCGGCCCCGGTAGTCGGTGGAGACGGCGTGTT # Right flank : CCGCTCGCAGAATACGCCGCGGCACGTCAACGATTCAACGCGGTCTCGCGAGCGCTGGCTCAGAAACGCCAGATCCGATCGCGCCCCATCGAGCGTCAACCACCAGAAAACCCCGCCATACCGCGAATTCGAGCGCTCCCCAGGAATCCGACCGGCACCCGAGCGCTCGCTAGACAACCTGCGCCTCCCGCGTAGGCAACCCCCGGCGACGCCCAACGAACGTGAAGCGATCCTCGCCGATCTCACCCAGATCCACAATCACCACCGAATCCTCATCCAGGTTCATGATCCTCTCACCGTCGGCGCGCAGGTGGACAAGCTCGCTGCGGGTCAGGTCGCAGATGAATACAGAGTACTGCAGCCGCTCACCGTTGGCCTCCATCAGTTTGCAGATGCGACGCAGCCGCCCCGGCTTGCGGATGTCGTAAGCAATGAGGTACCTGCGTCGGTTCGTCCTCATCGGGTCACCATCGCCGTGTACTCGTCCAACTCCCCCAGCA # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAATGGAGCCCGGCCTTGAAGGCCGGGAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-16.30,-15.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.41 Confidence: LOW] # Array family : NA // Array 1 9085-7664 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMIO01000054.1 Actinomyces sp. Z3 Scaffold54, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 9084 37 100.0 37 ..................................... CGGCGACGGTCATGGGGTACCTCTTTCTCGGGTGGTG 9010 37 100.0 37 ..................................... CGACAGCGACTCGCCACAGGCGACGATGATGACTGCG 8936 37 100.0 35 ..................................... AGGTCCTTCCGGCGCGAGTCTCATAGCAGAGGAAG 8864 37 100.0 36 ..................................... CTGAGCGTCGATGGCGCTCCGGGCCGCCAGGCGCTC 8791 37 100.0 35 ..................................... GCCCCGGAAAGAAATTCGAACCCCTCAGGCATAGG 8719 37 100.0 36 ..................................... TGTGCGACCGCCGCGTGCCGTGTCCGCCTCAAGCTG 8646 37 100.0 36 ..................................... CCCAATTCAAGTCCAACCCGTACGTCGGAATGTCGT 8573 37 100.0 36 ..................................... TGGTAGTCGACCGCGACCAGGTCGCCGGTGTGCATA 8500 37 100.0 37 ..................................... GTAGCGCCGTCGCTCCGCGTCTCTGCGTTCAACACAC 8426 37 100.0 36 ..................................... TCCACTGGTGGAAGTACCCGGTGATGTACAGCGTGT 8353 37 100.0 37 ..................................... ACATGGTGGGTTCTCCTTTGGCGAGAGCGTTCTTCTT 8279 37 97.3 36 .................................G... CTCGGCGGTGGTGTCGTAGTGGAGCATGGATTGGTC 8206 37 100.0 38 ..................................... TTGATCGGCAGTACCTGCATCTCGGAGACCAGTCTGTC 8131 37 100.0 36 ..................................... TTCTCGGCCTGGTACTGCACGCACCGCGTGGCAGCA 8058 37 100.0 35 ..................................... AGCCAGTCGATGGGGGTGATGCCGAGCCCGTACCC 7986 37 100.0 35 ..................................... TCACCATGCAGAAGATGCTGAGGATGTTCATCAGC 7914 37 100.0 32 ..................................... CGTTCTTATCGGTCTTGGTGCGCATGGTTGGT 7845 37 100.0 35 ..................................... TGCCGGTGAACTCGGTCGTGGTCATTGGGTTGCTC 7773 37 97.3 36 .......G............................. GGTGAGCAGCGCTGATGAGGTCATGGAGCAGGTCCT 7700 37 97.3 0 .....................C............... | ========== ====== ====== ====== ===================================== ====================================== ================== 20 37 99.6 36 GTCAGGAAGCACCTCGCACCTTAAGGTGCATTAAGAC # Left flank : TCTCGCCTCTGGAAGTGGCGGTATGACGCGGTTTCCAGGGGTAGG # Right flank : GGCTTCGGCGGCATCATCTGCTGAGCATTTCCTGGCTCTTCGTGCGTGGGGCGTGGAGGGTTGCGTGTCGCAGGGTGAGGAACCCGGTGAGCCGTGGCGGTTCATTGCGCCGGAATTGACTGCCGCTATCCCCGGGACCGGAAGCGGGGGCTGTCTACTACGCCACTTCGGGGTTAACAACGCCGGTTAACGTTCTGCTGAAGGGCTCCGAGGTATACAGCAGAGCGTTAAGTAGCGTTGTTAACGTCCAACCGGCGTAGCAGACTGTCTCGGCCTGGCGCGCCAGGAGACTGCGCCTAGAGGCTTGACCGGGTACGTCCACCCGCGTAACAGTTGCAGCCCGAACCGCCGCACCCACAAGCACTACGAGCCGCTCGGACGCTCCGTCCCTGCCGCATGCCGCTCAGTGCGCTACCAACTCGAGCAGAGCACAGGCCTCCCGATAGGCGGCGTCCTGCTTGGTAATCCGGGTCTGACCAGCAGGGTTCCACTGAACGCCG # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGGAAGCACCTCGCACCTTAAGGTGCATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.90,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 79226-80295 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMIO01000006.1 Actinomyces sp. Z3 Scaffold6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================================================================================================== ================== 79226 37 100.0 37 ..................................... TGTCGATGGCTTGCTGTACCGTTTCGTGAAGTCGGGC 79300 37 100.0 36 ..................................... CAAAACTGGGGATGCGCATGACTCATCTTCCTCTCT 79373 37 100.0 36 ..................................... ACAAGCTCATGGAGCAAGTCCTGCCACTGCTGGCCG 79446 37 100.0 36 ..................................... TGACTTCAGCTCGGCGTTCAGCGCTGCCTGCCATAG 79519 37 97.3 36 .....................C............... AGAATACTCTCAATGGTCATCGGTAGTCTCCTCTCA 79592 37 97.3 36 .....................C............... GCTCAGACGCCTCGGCAACAGTGGCGTCCTCGGTGG 79665 37 100.0 37 ..................................... CAACCTGGCCGGCATTGTCATCCTCCTCCTTGGGCGG 79739 37 100.0 35 ..................................... ATTAGAATGTAAGCCTCGCCGGACCGCCATATGCT 79811 37 100.0 36 ..................................... AGATCCGGCCTCGCGCACCAGCTTCATCAGTGCGGC 79884 37 100.0 35 ..................................... CTCCGCCTCGCGGCGAAGAAGCTCCATTTCCCCCG 79956 37 100.0 33 ..................................... CATGTGAGTGAGACGTAGAGTGATGAGTGTGGA 80026 37 100.0 39 ..................................... GTCATAGGGGACTCCCCTCCGGGGCGGAGTGAGCGAACC 80102 37 97.3 120 ......................C.............. TCATCGACCATGCCGGGCGCATGACACGCCACACCAAAGACCGGTAGAATCTGAGGCGAGGCGGGAGCCAGCCCACTCTTGGCGCGCAACGCGCTGCGGGCAGGCCACCCGCCTCCTCTT 80259 37 89.2 0 .....................C...........G.CG | ========== ====== ====== ====== ===================================== ======================================================================================================================== ================== 14 37 98.6 43 GTCAGGAAGCACCTCGCACCTTAAGGTGCATTAAGAC # Left flank : GGGCGTTTAGAACGCGGGCTCGCGGTCTGTTACGCCTGTTCGGGGTTTACTACGCCACTTAGGGGTCTGCTGAATGGCTCAGAGGCCTTCAGCAGACCGTTAACTGGCGTTGTTAACGGTGAAGCGGCGTAGTAGATGTCTGGTGCGGAGGTGAGTGCCCCCGCGGTGGTGCATGGCGGGGTGTTCGCGGTGTCGGGCAACGGTGGCGGGTATGGTGTGTGGGGTTGTTGGGACGTGTGGGGTTGGCGTGGTACTCGCCAGATGGTCACAATTCGGTCTACGGTACAAAGATTGGTGCATTTTGACCCTGACTTTTCCGCATGACTTCGTTGAAAGTTGGTGGCTGGAGGGGTTTGGAGGGGTGTCGGTGGCGCTTGGCTTGTTTTCAACGAAAGGTGGTAGTTTTGGCCTGGTGCCAGTCGGTCCCGTGGGGTGCTTGCGGGGTCGGTGGCGATCTCGCCTCTGGAAGTGGCGGTATGACGCGGTTTCCAGGGGTAGGG # Right flank : GCGGGCGGGGCGTGTGGGGACCGTCGGCCTCGGATCGGCACTATGGTTAGTGCCTGCTTAGTCAGGCGGTTCAGCGGACCCTGTTCACTCCACTGCTCGGTAGAGCGCGTGCGGCACGCCTGTGGCCGCACTGCTTTCAGGACGCCTGGGCCCAGGACCTCGCCCAAAGAATGACAGGGCGCATGCCCGAACTAGCGGCAGCGGACCTGGGTGACGTCCCCGCAGCCATCTACGCCCTGCGGCATCGGGCTGCGGTAACTGAGGTGCGCAGGTACCTTCGGGACCACCCCGGCGCCGCCGTCGTCGACCTGGGCTGCGGAATGGACCGACTCGTCGACGGTTTGGACGCCCCTGCGGCGCGCGTCTATTGCCTGGACTTGCCGGAAGTCATGAGCCTGCGGCGTGAGTGGCTACCACCTCACCCACGTGAGAGGGAACTGCCCGCCTCTCTGACGGACACCGACTGGATGGCAGACGTCGACGCCGACGCCGGAATGATC # Questionable array : NO Score: 2.59 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.59, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGGAAGCACCTCGCACCTTAAGGTGCATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 114603-117220 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMIO01000006.1 Actinomyces sp. Z3 Scaffold6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 114603 36 91.7 36 ..T...G................G............ GGTGCTGAGCTTCACCAATGCCGCTGCCGACCACAT 114675 36 91.7 37 .................C.T.............A.. TTGTTGGGCATTGGTTCGATCTGGGCCACCGCGGGAC 114748 36 94.4 35 .................C.T................ GCGCGCACCCTCGCGGCGGCGTTGACGGGTGCTGT 114819 36 77.8 21 .................CG.GAA.....T..C...A GTTTGCCACCCAGGAGCTACT GACC [114842] Deletion [114876] 114880 36 91.7 36 .................C.T...G............ AAGCAAGGAGAAGGGCGTCTGGCGCACCATCGACTC 114952 36 100.0 36 .................................... TAGCAGAGGCATCTCACGGGCCGGCAGACCACCCAA 115024 36 100.0 36 .................................... GATCAGGTCTGGTTGGGTTTGGTTTATCAGTACCCC 115096 36 100.0 36 .................................... AAGCATGCGCACCGTCATGCACACCGACTGGCCAGG 115168 36 94.4 35 .................C.T................ ACGCCGGCCACCGGCCGCAGCACGTGCACGGTCAC 115239 36 94.4 37 .................C.T................ CCCGGGCGCTGGAGTACGAGTCCGACAACTTCGCCTA 115312 36 94.4 36 .................C.T................ CTGGAGATCCTGCACGACTGCCCGGTGCGGATTCTG 115384 36 100.0 36 .................................... CCGAGATCGAGACCGTCCAGGCGCTCATCGAAACCG 115456 36 94.4 35 .................C.T................ TCGCCGACGATGTACAGGGTGCCGCGCCGGCGGAT 115527 36 100.0 36 .................................... CGCTGTCGTCGACGCGCTCGCGCTGGAGGACGTCAA 115599 36 100.0 36 .................................... CGGCAAGGAGATCGACATTACCGAGACCATCGCCCT 115671 36 100.0 37 .................................... GGCTACCCGACAGCGCCCCCGTGTCAGCCAAGATGTC 115744 36 100.0 36 .................................... GCTCGCCGACGAGCTGGTCGTTGCCAACGGCAATGG 115816 36 100.0 35 .................................... CGGCAGGCACCTGATAGCGGTGCAGCGCATAGTCG 115887 36 100.0 37 .................................... CCACCGGCTGGTGGCTGTGGTGGGACTGACCACCCTC 115960 36 100.0 37 .................................... GCAATGAGAATTACGCGACGGCGGCAACCAACTCCGC 116033 36 100.0 37 .................................... TAGCGCGATTGAAGGCGGATTGTCAGACCAAGCCCTA 116106 36 100.0 36 .................................... CTCCGAGCGTGCGGGCGGTATTGACCTGTTCGACCG 116178 36 100.0 37 .................................... GACCATGACGCCGAGTGAGATGGTTATGTCCACGCTG 116251 36 100.0 33 .................................... CTGGAATATGTCTCGCGCGCTTACGATAGCGAG 116320 36 100.0 38 .................................... GCGGTTACTGAGCCGTCAAGGGTTGCGGATCAGGGCCG 116394 36 100.0 35 .................................... TTCGACCGGCCACTAGAGTTTTTCGGCGGCGACGT 116465 36 100.0 37 .................................... TCGACCAATTGCTGGGGCTCGTCGCCGATAGTAGCGG 116538 36 100.0 36 .................................... CCGTGGATCGAATGCTGGTCGTAAGCGATGTAGCGG 116610 36 100.0 35 .................................... CGAGCGCGGCTATGTCAACCTGAAAGAGTGGTCCC 116681 36 100.0 36 .................................... ATCCCCGCTGTCGCGGAAGGGATTGATGGTCTTCAG 116753 36 100.0 36 .................................... GTCGTAGCCGTACAGCTCGCGCGAGGGGTTGGTGCC 116825 36 100.0 37 .................................... GGGCGAGGCCCACAACACCGGGCGAGACGTCACCACA 116898 36 100.0 36 .................................... GCACGGCAGGGCCACCGTCAGCGACGGAGTCGATCA 116970 36 100.0 36 .................................... CTCGGGAGTGGTGATGATGATGTTCGCGCCAGAGTA 117042 36 100.0 36 .................................... CACCGCGCCCGGGTACTCCACGACCACTGGGTCGAC 117114 36 100.0 35 .................................... TTGACGCCCTTGTCATCCTCGGCGTCGGTGAACGT 117185 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 37 36 98.0 36 GCCTCAATGGAGCCCGGTCGTGGAGACCGGGAAGAC # Left flank : ACGTTGCCGCGCGTGTCCGGAGACGGCCCAGACTGGAAACCGCCGGGTGGAGTGGCATGCTGCCGCGCGTGTCCGGAGACGGCCTGCTGGCCCGGTTGCGTGAGCGCGCCGAGACCCACAACCTGCCGGTCGTTGTGGTATCCGTGAAGGGGCTCTTCTGGTTAGTGGGTGTGGGTGGTGTGGGGTGTGTGCCCCGCCGTGGGACGGAATGATGCTCCTATGGTTGTCAAAATCGATGACAAACGCCGCCTACGGCCGCGAGAGCCGATCTGACACCCGCATGATTCCAACGTTCTGCCCGCGGCTGGTGCCGTCTCCTACATCGTTTGTCATAGATCTGGACACTCCCTGCCTTCGCCCGCCGGAATACTCGCCAGCGGCAAGCTGCCCGGCGTCGACGGTGGCCGGCGAGCAGGCCAGCATCCGACATCGCAGGTGCCAAACACCACGTCACGTCCCCACTCCACTCCCCGAGTCGAAGAAGCCCGTTTTGTCGCCGC # Right flank : CAGCTCGCTAATTTTGCCGCAGCATGCCAAGGATTGTACCTGATCTCGCGAGCGCTGCCGTTGAAACGCATTACTCAGCCACGGTGCCCTGCTCGGCGAATGGTAAGAAAACCGCGTCACGCCGCGAACTCGAGCGCTTCCCAGGGAATCGGTCGGCACCGGAGCGCTCGCACGTAGTCGGCGTCCTTCGGTTCGGTGAGCCTGCGTGTTGGTTGACGAGCATGAGACGTTCCTCCTCGAACTCGCAGTGCCTACATGCGCCAGGCTACTCTCGCCGCAACAGCTTCTACCGATATCGGCGATGCGGGGACGCTGCGGCACGTCGGTTTGTTAGCGGGAGCGCCAGGACCGCAGGCCGGCCTCGCCTGCGGCGATCGCGCCGAACAGGGCGCCCGCAATCGGCCAGATTATCCAGCTGATGTCCCAGCTGGAGCCGATGAAGGACCAGGCGAGGTAGATGGCCACGCAGCCGATCCAGTACGGCCCGGCGATCGCCTCAA # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAATGGAGCCCGGTCGTGGAGACCGGGAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-14.60,-13.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [25-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.41 Confidence: LOW] # Array family : NA //