Array 1 55374-54635 **** Predicted by CRISPRDetect 2.4 *** >NZ_JDFF01000018.1 Porphyromonas catoniae ATCC 51270 ctg7180000005747, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 55373 47 100.0 30 ............................................... GGTAGTCCGTTCCCGTTTCTCCGTCGTGGA 55296 47 100.0 30 ............................................... TCAGCGCCCATCATATACCACCCGCAGGCA 55219 47 100.0 30 ............................................... AAGCTATAATCAATGACGTTATTGCTAAGA 55142 47 100.0 30 ............................................... GTGCTTGGCGCACTGCCTCCTTGTCTCGCT 55065 47 100.0 30 ............................................... CAGCTATGCGTAAGCGTATTACTCTCCAGC 54988 47 100.0 30 ............................................... CTTGCTGCTGCTTATTTACCTTGCCTTCAG 54911 47 100.0 30 ............................................... TCAAGTATCGTAACACCACACGCCTTGCTA 54834 47 97.9 29 .....................................T......... GGAGACAATATGCTCCACGCTGATGTTTA 54758 47 95.7 29 .......................T.............T......... AGGGGAACAAAACGTTGTAATACGTGCCA 54682 47 83.0 0 ............................G.....G.TT.G.T.T..T | T [54637] ========== ====== ====== ====== =============================================== ============================== ================== 10 47 97.7 30 GTTGTACTAGCTATTACGAAGGTACTGAATTGAAAGCCAATCACAAC # Left flank : CCGCTGCTTCCAAGGAGAAATTCGTAAGATATCTTATCCCCTACTTCGATGAAAGCAAGTCGACTAAGTGAATATCGTGTTATGTGGGTCTTCGTCTTCTTTGATCTTCCTACTTATACTGCACTAGAGCGTAAAGCTGCCTCAGGCTTTCGCCAAAGTCTTCTCAAGGATGGCTTTTCGATGTTTCAATACTCTATCTACATGCGCCATTGTGCGAGTGCGGAGAATGCAGCTGTGCATGTACGACGAGTGAAGAATATGCTCCCCGAAGAGGGAGATGTAGTGATTATGACAATCACGGACAAGCAGTTTGGGATGATGGAGCACTTCTCTTCGCATATTCCAACTAAGCCGCCAGTAGCTCCTCCCCCTCTTGATCTATTCGGATTTTAAGTAATTCTTTTCTCTGATATATACAAAAAGCCGATGGAACACCATCGGCTTTTTCTTTTCTATAAATCCTCGTAAGGAGCTAGTGCATAGCTGAATATCTATGGTCA # Right flank : GTTTAGTCTTGGGAATAGGGCTAGCGGGGAATATGGATTGGGGTAGGGTTGGTGAAGGTCTGTAAGAGAGAAGGGAATATCCCAGTTGGGAGGTGGATAGCAATGCGAGGCTTATGCTACTTTGTAGTGGGATAAAGTGTCCCTTACGCTATGGTTTTCACGGTAGGTCTTTGTACCTTTGCCTTGGGGGTACACTGGGGGTAGAGTGATTTGCCCTCTAGACTGCCCGGCAAAGTGATAACATATTACACTTCATTATCAGGATGAAAAGAACTACTATCTGCTTCACTCTCGCAGCCTTGTTTATGGGGAGCTTGTGTACCCAAGCACAAGTACTGACCCGAGGTAAAAGCTATGGAACGCACCCGCTTACTACTCCAGTCCTCATTGATTCCGTCAATCTAAGTAAGACGAGCTTTGACCTGACGAGCTTCATCAAACGTCCTTATGAGATTGAAGGAAGGCGCTCTACCTCCATTGCTGCTTCGTCAAAGGGGATA # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTACTAGCTATTACGAAGGTACTGAATTGAAAGCCAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.70%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.40,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : NA //