Array 1 1-1583 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLEH01000053.1 Acinetobacter baumannii strain ABBL053 contig-40, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 61 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 121 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 181 28 100.0 32 ............................ AATGTACTTTAATTTCCACTCGACACCAGTTC 241 28 100.0 32 ............................ CATGACCGAAACAGCCAAAAAGGTTTTATGTA 301 28 100.0 32 ............................ TAAAGGATAGTTAGCTGTAGGCCCTGCGGTTT 361 28 100.0 32 ............................ TTATAGTTATGTGTGTGATATCGTTAAGCTGC 421 28 100.0 32 ............................ TAGCACAATCCAAACCTCAATAAAAAGTAAGA 481 28 100.0 32 ............................ GAGCCAATAAGATCGCGAAGTATGCGGAAATC 541 28 100.0 32 ............................ ACAGAGAAAACCCCACATGTTCGAGGGACTGC 601 28 100.0 32 ............................ ATAATTCCGCCATCCTCGGCTGAGATATGGGT 661 28 100.0 32 ............................ TGCCGGAGCGGTCTTGTCATTGGCGAACCCGC 721 28 100.0 32 ............................ TATGCGATTTGATAATTAAATTGCGATACTGG 781 28 100.0 32 ............................ GAAATAAAAAACACCTGATGAAAACAGTTCAC 841 28 100.0 32 ............................ ATAATCACGAATATCACCAGTAAACCAGTGAT 901 28 100.0 32 ............................ TTATTGGTCCTGGTCAGTGGAATGGTGATTCT 961 28 100.0 32 ............................ TGGGTAAAAGCCGATGGATTAATCATCTTTTG 1021 28 100.0 32 ............................ ATTAACAAGAGTGGAATTTATTGAACTATTAA 1081 28 100.0 32 ............................ TCTGGGTTCTTTTCGCGTGTATGGGATACTTG 1141 28 100.0 32 ............................ TGTAAAGTCATTCGTAATAACCGTTATACGGC 1201 28 100.0 32 ............................ AAAACCAATCAAATAACGGTTATGTGGCCACA 1261 28 100.0 32 ............................ CATAGCGACATATAGTTTTGCCCGGATCTGAT 1321 28 96.4 32 ..................A......... TGTTTCGCGTTGAGGTCCGGGTAATCGCCTAT 1381 28 78.6 27 ....C.....CTCC..........T... GTCTTGTATCCTGATTTCAAAGATTCA 1436 28 92.9 32 ....C....T.................. ATATCACGCGCCATTGCAAGTTTTCTACCGAT 1496 28 89.3 33 ...A........CC.............. TGATCTTTAAGATTAAGCATCCGTTCTGTTTTT 1557 27 85.7 0 ...TG.......C...........-... | ========== ====== ====== ====== ============================ ================================= ================== 27 28 97.9 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : | # Right flank : AGAGTTTCTTTCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGTTGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATGATATTTAAACTTTAACAATAAACTATGCATGTCATTTTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCAATTTTGGATAGCTATGCTATTCGTACAGGACATTCGTCTTGGCAAGCACCAATGACAATGGACGGCTTAAAAGAAATTCGTAGTGCATTAAAAAAAGTAGCTACCCGACAAACTGCGGTGGCCGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTGGGAGCAAAACATAAATTTGCACACGATGGTGCATACCCAGTTGCATCGACTAAGAAACAGCAAAAGTTACTCATGCTTGATGAGTGGGTCAAAGTAAGTAGCTTGTTGGCAGGTGCAGCAGGAGACATGCATGATATTGGTAAGGC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 50423-45533 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLEH01000030.1 Acinetobacter baumannii strain ABBL053 contig-2000003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 50422 28 100.0 32 ............................ TTTGACTTTGCTGCCTCTAACTCTTTTGTTTT 50362 28 100.0 32 ............................ AACTGGAGCAGGATGAAGATGCGAAATTAATT 50302 28 100.0 32 ............................ AACAGTAAACTACCGGATTTACAGTTCAGACA 50242 28 100.0 32 ............................ GAACTCGCTCAAGACCAATGAAGTTAATGGCA 50182 28 100.0 32 ............................ CTACTAACTGCCTTGCATCTTCAGCACCGAAC 50122 28 100.0 32 ............................ ACAATGTGGGGCTTTTTTTGTTTGTGAAATTA 50062 28 100.0 32 ............................ TTATTGTGAGCACCTTGATTGCTGTGCGCTGC 50002 28 100.0 32 ............................ TACAGCGGGAAACTTGAAAGTCATTGCGAAAT 49942 28 100.0 32 ............................ TGATTGCCCCCTGAGGAAACTGTATAAAGTCC 49882 28 100.0 32 ............................ AAACACCAACTAAGCCATTCCCTATTCAAAAA 49822 28 100.0 32 ............................ ATGAACTTTTAATGGATGCATGCGCCGCCCAC 49762 28 100.0 32 ............................ ACGAACAACGATAATTTGGAATACACGCTCAT 49702 28 100.0 32 ............................ TCAGGAGAAAGATCGTTCAAAAGCTCAAAACC 49642 28 100.0 32 ............................ TGAAAGTTTTGATATCCACTCTGCTGTTTCAA 49582 28 100.0 32 ............................ AGATGGTAAGAAAATTATTGAGTCTGGAGACA 49522 28 100.0 32 ............................ CGACAGTCCAGTTGATCAGATCTTGATTAGAC 49462 28 100.0 32 ............................ AATGACATGGTTCAACAATTAAATTCATCTCA 49402 28 100.0 32 ............................ GTTCTTTTCTGCAATATGTGCCATTAGGTATT 49342 28 100.0 32 ............................ ATTTTAGATGAAACAAAAGATAGCAGGATTAT 49282 28 100.0 32 ............................ AGACCAAGCGGATTGACCGTATTGATAAATAA 49222 28 100.0 32 ............................ TTCTGCAATACAAATCACTGGATCAGCCAGGT 49162 28 100.0 32 ............................ TGAGTCTTTGATTTCCCAAATATTACTTGAAA 49102 28 100.0 34 ............................ CCTGAAAAATTTCACTGTGTCCATTTCGTTATTA 49040 28 100.0 32 ............................ TATGTCTTTAAATTCTGAAAAAACACTTGTTC 48980 28 100.0 32 ............................ GAAAAAATTGAAAACTTTTTAGAAGTAAATGA 48920 28 100.0 32 ............................ GCCACACATGCCTAAAAACGCAAGTGCGCTCG 48860 28 100.0 32 ............................ ATTATCAGATAAGCCTTTTATGAATGATCGTT 48800 28 100.0 32 ............................ ATTAGCTATTAGCTTTTTGGCAACAACAACAG 48740 28 100.0 32 ............................ AGTTCATGAAAACAGCTTTAAAAAGAAAGCAC 48680 28 100.0 32 ............................ TCCGAAGGTAGTGAAGCTGTGTGTGAATTTAC 48620 28 100.0 32 ............................ TTGCAAGCTCGTCTAGCTAAAGTAGACCCTAA 48560 28 100.0 32 ............................ TGGTACGACAACTACGAAAAGCTGAGCAAAGT 48500 28 100.0 32 ............................ TCAACTTAAATGGATGCTCCCCGCGGTGAATT 48440 28 100.0 32 ............................ TTGATTGCTAGACGGATTTTTAGGCAGATCAT 48380 28 100.0 32 ............................ GAGTTTAATGCGCTATATGGCGACGAGGATTT 48320 28 100.0 32 ............................ CATGCAATCGCGTTGATTACCGCAGCTTCGAA 48260 28 100.0 32 ............................ ATGAGCCGCAACCATACGGTCTATGACTTCCA 48200 28 100.0 32 ............................ ATAGCGCCCTGCTCTATGTTGTCACTTCCGAA 48140 28 100.0 32 ............................ TCCAAGTGAATCGGCTCCTAATGCAAATGACC 48080 28 100.0 32 ............................ TGAAAACCAATATGCTGCCTAATTGCCATAAG 48020 28 96.4 32 ....A....................... GATCTGCGTCCATTTGTACTTGCTGCGGGTGC 47960 28 89.3 32 ....T.......AT.............. ATATACAGCACCGCTTAGTGCGACGCGGTCAT 47900 28 89.3 32 ....T.......AT.............. GCCCACAGGTTGAGCATCAACGGCCATCGAGA 47840 28 89.3 32 ....T.......AT.............. ATCATAGAGCTCACTTTGTCGTTGAGCCTGCA 47780 28 89.3 32 ....T.......AT.............. AGAAGGCCCGTAATTTAACTGTAAGCCGTGGT 47720 28 89.3 32 ....T.......AT.............. TCTTCCTGAGTTTTAATCCCATTTGCCTTACA 47660 28 85.7 32 ....T.T.....AT.............. CATCTTCGCCAATTGCTTTTGGAGAGTTGCTA 47600 28 89.3 32 ....T.......AT.............. TTCAGGGAATTATCGTGAAACTTTCATTGACT 47540 28 89.3 32 ....T.......AT.............. TGCACCAGCTGCTGGCTGGTTGAAATCTGCAA 47480 28 89.3 32 ....T.......AT.............. AGAAGGTGCAGAGTTTTGGGACTTTGGGTGGT 47420 28 89.3 32 ....T.......AT.............. TGTTTCAAAAGCTACACCATCAAAACCATTGC 47360 28 89.3 32 ....T.......AT.............. TATTTAAGTAATAAGTTTAATAACGACCTAGT 47300 28 89.3 32 ....T.......AT.............. AACACGTTCTCTATATCGCTGTTTGCGGTCAT 47240 28 89.3 32 ....T.......AT.............. TTCAGTTGGATATGCCTTTGATACCAAGAAAC 47180 28 89.3 32 ....T.......AT.............. GCCTGCAGACACGGATTTACGCAGCTGATCGA 47120 28 85.7 32 ....T.......AT...........C.. TAACCAAACTATGTCATCGATCGGAGATTTCA 47060 28 89.3 32 ....T.......AT.............. TTAAAATAAATGCCTGTGGTTTTTTCTTAACT 47000 28 89.3 32 ....T.......AT.............. AGTTTCCGAAGTTGAATTACACTCGCCAAGTT 46940 28 89.3 32 ....T.......AT.............. TAACACAGTGATTTGATTACCTTGAGCAACCC 46880 28 89.3 32 ....T.......AT.............. ATCTTGATGCCGAGGTCTTTAGCTTCTTGAGA 46820 28 89.3 32 ....T.......AT.............. TCATCCACCTTTGATGAAACGGATCCACGCAA 46760 28 89.3 32 ....T.......AT.............. TCTTGTGTGACGGCCTCCACTCCAGATCCCGC 46700 28 89.3 32 ....T.......AT.............. TTAAGCTTCAAAAATAGCCATTGATTATAAAA 46640 28 89.3 32 ....T.......AT.............. TGACAACTTTCCACGGCAATCAGGGCTTTCCA 46580 28 89.3 32 ....T.......AT.............. TAAAGATGCACGTGGCCTAATGCAAGTTATTC 46520 28 89.3 32 ....T.......AT.............. TTTAAAATTAGGTGCTGAGTTACCACGGCTCA 46460 28 89.3 32 ....T.......AT.............. TAAACCAAGAACTTGAAGATTTTGATGCTTAT 46400 28 89.3 32 ....T.......AT.............. TAAAAATAGTGTGTTAATTATTTATGATGAAA 46340 28 89.3 32 ....T.......AT.............. CGTATACATGCACATCAATACGATATCCCGAT 46280 28 89.3 32 ....T.......AT.............. ATACTATTATAATGATCTAAACCCATTACAAC 46220 28 89.3 32 ....T.......AT.............. TGCAGCTACTCGACATGTTGGTAGGGCAGATG 46160 28 89.3 32 ....T.......AT.............. CAGTCGGCTGGTGCTAATTGAATAAAATCGTT 46100 28 89.3 32 ....T.......AT.............. AGATTGAGGCGATTTTTATCGCGGACATTGCC 46040 28 89.3 32 ....T.......AT.............. CAGTCCCCGCTTTGAAGCATTCCCATCAGTAC 45980 28 89.3 32 ....T.......AT.............. TCACAGCTATCGTCTGGCTGCCGTCGCGTAGA 45920 28 85.7 32 A...T.......AT.............. TTATTATTAAACGGGAAAAGTATATTCTTGCT 45860 28 89.3 32 ....T.......AT.............. ATACTATTATAATGATCTAAACCCATTACAAC 45800 28 89.3 32 ....T.......AT.............. ATCATCAATAAGTTGGCCTTGATTTAAATAGT 45740 28 89.3 32 ....T.......AT.............. AGATACAAACGAGTTCGCATCTCGACCAGAAG 45680 28 89.3 32 ....T.......AT.............. ATTATCCAGATAAAACCATATCTACAAAGTGG 45620 28 89.3 32 ....T.......AT.............. TCAACCTGAACACAGACATACATGTTCTATTG 45560 28 78.6 0 ...GC.......AT..........AT.. | ========== ====== ====== ====== ============================ ================================== ================== 82 28 94.3 32 GTTCGTCATCGCCCAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAACGCTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGCAAAAACTCTCATGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTAGTTAAAGATGCTTTTGTAATGCCACTCGCTTTTACATGTGCAGCAAGAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACTTTTAACCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTGAATCTTAAAAAGAGAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTAC # Questionable array : NO Score: 5.66 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAGATGATTTAGAAA # Alternate repeat : GTTCTTCATCGCATAGATGATTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 55513-56380 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLEH01000030.1 Acinetobacter baumannii strain ABBL053 contig-2000003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 55513 28 100.0 32 ............................ ATAAAGCATTAGAGAAATCATCGCGTGCTGTA 55573 28 100.0 32 ............................ AACTCATACAGCGGGTCCAAGAGCCTATGGTA 55633 28 100.0 32 ............................ AAGACCAGTTTTGAAGGATATTAACTTTTTAT 55693 28 100.0 32 ............................ TCGTGCTTGGGTATCACATATTGATGTGACTT 55753 28 100.0 32 ............................ CACTAATCTCTTTGATTTAATTAAGTTTCAAC 55813 28 100.0 32 ............................ ATCCGCATCATCAAAAATCGCAAGTGGGTTTG 55873 28 100.0 32 ............................ AATAACGACGGTTGCGCTGTTGCACGTTCAGC 55933 28 100.0 32 ............................ TTGATGAGAAACTGTTATTGTGTATGTCTCAC 55993 28 100.0 32 ............................ ACGACAGGTAAATTGGTTGCCATGTGTATTGA 56053 28 100.0 32 ............................ AATTGTAGAAAGCGTATCACTTATTTGCTTAT 56113 28 100.0 32 ............................ ACGGATTACCTACAGGTTTACCAGTTGCATAA 56173 28 100.0 32 ............................ TCTTGAAGGTGAGCCAACAAAAATCCATTTTT 56233 28 100.0 32 ............................ GTTTAAATCCATAAATGAATTTTGCGGTTTTT 56293 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 56353 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 15 28 100.0 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : TTTAAAAATAGAAGCCGTTTTACCTGCATTTGCCTGATAATCGGTTGGAATAAGGAAGTCTTCATTTAATAAAGTTCGAGCACTGAGATAGGGTAAATCAAGTGCTTGTTGTTTACTTAAACGAATTCCACCTTTTTCAATATTGGAATTAATCGTCTTTAAACTAAAGTGTACCGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATCTAGCCAATTTTTAACACATTATTTGAAAAATGAAAGTATTGAAGGTGAGAGCTGCGACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCATAAATTTAGCCTAAGACGATTAGGTTATATTTTTATAAAATTAGAAAAATTAATATAATTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : | # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [83.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //