Array 1 224578-227969 **** Predicted by CRISPRDetect 2.4 *** >NZ_UCPS02000057.1 Acinetobacter baumannii strain D3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 224578 30 100.0 30 .............................. ATCAATTTTTTATAAAATATGAGTATAAAA 224638 30 96.7 30 .............................G AAAATGGTATGAATAAAGGCGTACCACAGC 224698 30 96.7 30 ............................A. TTAAGCCATTTTCTTTTGTGAATCCTAAAG 224758 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 224818 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 224878 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 224938 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 224998 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 225058 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 225118 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 225178 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 225238 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 225298 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 225358 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 225418 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 225478 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 225538 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 225598 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 225658 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 225718 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 225778 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 225838 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 225898 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 225958 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 226018 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 226078 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 226138 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 226198 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 226258 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 226318 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 226378 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 226438 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 226498 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 226558 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 226618 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 226678 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 226738 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 226798 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 226858 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 226918 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 226979 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 227039 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 227099 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 227159 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 227219 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 227279 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 227339 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 227399 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 227460 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 227520 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 227580 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 227640 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 227700 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 227760 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 227820 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 227880 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 227940 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 57 30 95.6 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //