Array 1 82903-83579 **** Predicted by CRISPRDetect 2.4 *** >NZ_ABDW01000006.1 Clostridium perfringens E str. JGS1987 gcontig_1106202897982, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 82903 30 100.0 37 .............................. AAAAAGGTAATTGGACAGGGGAAGAAGATTTAAAAGT 82970 30 100.0 34 .............................. GCATCTACTGGAATATAAACCTTAAAACTTTCAT 83034 30 100.0 35 .............................. CTTGTATCATCTTGTACTTTTTCTTCTTTTGTATC 83099 30 100.0 36 .............................. GCAGACAGAACAAAGTTAAAAATATCAGAGATGATA 83165 30 100.0 35 .............................. TCAAGATTTTTGGGAAAGTAACGTATTTGTTAATT 83230 30 100.0 36 .............................. GCCTGTTAATGCCGACATGGTATATAATAAAAACAA 83296 30 100.0 37 .............................. CATTTAAAACTTAATTAAATGTTTCAAATTAAACTAG 83363 30 96.7 35 .........C.................... CAAGAAAGCAAAATAAATATTAATAAAATCGACGA 83428 30 96.7 26 ..........................T... ATAAATGGGATAAAGGTTGAAGTTAA Deletion [83484] 83484 30 80.0 36 TA......C......TGA............ TACAGAATGTTTATTTAAAGTATTAAAAAAAGAATA 83550 30 80.0 0 AA......T....CA.T............. | ========== ====== ====== ====== ============================== ===================================== ================== 11 30 95.8 35 GTTAATAAATAACATAAGATGTTTTTAAAT # Left flank : ATATATATTAGGTGAATCAATAGATGAAAAAATGTATATTAACCTAAATAAGCATTTATCATCACATAAAAGTAAATACCCTATTTATTTAGGAGATAATAGTTTTAAAGCCAAAATTTCTAATGTTGAAGAAATTGAAGTTGAACCTATTCAAACAAATAAAAATATTATTATTAGTAGTATTTTTAAGAGAAAAATATTAAAATGTGAATATGATGAAATAAAATTATATTTACCAATAAAATTACAAGAAGTGTCTTTAAATTATGAATATGACTGGTTTATAACTTCAAACCAAAAAGTAAATATAAATGATATAGAATATATATATAAATATAAAAATAAGAATATACAATTTATATAATTTTACCAGTGATATCTTTAGAAGTAAGCTATATATTAAATCTTAAAATTTATTTAATACTGGTAATTTTTTTTAAAATGGGATATATACTATATTTAAATAATTTTCTTAATTGGAAAAGGGCATAACTGCTAAG # Right flank : TATTTGTTTTTAATTTATATATGAAGGCTAGTTTAATAATAAATAACAAATGTGTTTTAAGGTTACTAATTTAATTTTGGTAACCTTTTTATGTTTTATTAGATAATTTTAAAAATGATATAATATGGTTAAAAAATAATTATATTTAACATTAATTATAATACATTTTTTTAGAAAGAAGAGTGAAATAATGAGAGTAATAATAGCTGAAAAACCTTCTTATGCTAAAACAATAGTTAATGCATTAGAGCATATAGGAGAGCATTTCACAAGAAGAGATGGCTATTTTGAAAGTATAAACTACTATGTAACATGGCAGTTCGGACATCTTTTTAGATTATATACAATAGAGGAATATATTAATAGTGAAGATAAAAGATGGAAAGAGAACATACTTCCTTATATACCTAAACAGTTTAAATTTAGGCTTAAAGATGATAATGGAGCAAAAAAACAATACCAGGTAATTCGAAAATTAATTAATGATAAAAAGGTTACTG # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAATAAATAACATAAGATGTTTTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:86.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //